Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00380 |
Symbol | |
ID | 8631677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 39882 |
End bp | 40559 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | uncharacterized membrane-associated protein |
Protein accession | YP_003312848 |
Protein GI | 269793393 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.157749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTCTG CGACCGTGAC CCCGCCCCAG ACGCCCTCCC TCGACGGCGT GGCCGGGTGG GCAGTCGAGC TCATGGAGAC GCTGGGCGTC GTCGGAGCCG GGATCGCGGT CGCTCTCGCG AACTTCTTCC CGCCGATCCC CAGCGAGGTC ATCCTCCCGC TCGCCGGGTT CACCGCCAGC CAGGGCAGCT TCGGCTACGT CGAGGCCGTG GTCTGGACCA CCGTCGGGTC GGTCGTGGGG TCCACGATCC TCTACCTGGT AGGGGCTGCT GTCGGTCGCG ACCGCACACG CCGCTTCATG GCGCGGGTAC CCCTGGTGAG CGTCGAGGAC GTCGACAAGG GCGAGGCGTT CTTCCTGCGG CACGGCAAGA AGGCCGTGTT CCTCGGCTGC ATGGTGCCCG TGGTCCGCAC CCTCGTCTCG ATCCCCGCGG GCGTCGAGCG CATGTCGATC TGGCTCTTCA TGGGCTTGAC CGGGCTCGGC AGCCTGCTCT GGAACACGCT GTTCGTCACC GCCGGGTTCC TCCTCGGCGA GCGGTGGTAC GTCGTGGAGT CGTTCTCCGG CCCGGCCAAG ATCGCCGTCA TCAGCATCGG CACCCTGCTG GTGCTGTGGT TCGTGCTCGT CAAGCTCCGG GCACGGCGCC TCAGCGCGCC GGTCGTCGCA CCCGACCCCA CGGCCTGA
|
Protein sequence | MSSATVTPPQ TPSLDGVAGW AVELMETLGV VGAGIAVALA NFFPPIPSEV ILPLAGFTAS QGSFGYVEAV VWTTVGSVVG STILYLVGAA VGRDRTRRFM ARVPLVSVED VDKGEAFFLR HGKKAVFLGC MVPVVRTLVS IPAGVERMSI WLFMGLTGLG SLLWNTLFVT AGFLLGERWY VVESFSGPAK IAVISIGTLL VLWFVLVKLR ARRLSAPVVA PDPTA
|
| |