Gene Sked_00380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00380 
Symbol 
ID8631677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp39882 
End bp40559 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003312848 
Protein GI269793393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.157749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTG CGACCGTGAC CCCGCCCCAG ACGCCCTCCC TCGACGGCGT GGCCGGGTGG 
GCAGTCGAGC TCATGGAGAC GCTGGGCGTC GTCGGAGCCG GGATCGCGGT CGCTCTCGCG
AACTTCTTCC CGCCGATCCC CAGCGAGGTC ATCCTCCCGC TCGCCGGGTT CACCGCCAGC
CAGGGCAGCT TCGGCTACGT CGAGGCCGTG GTCTGGACCA CCGTCGGGTC GGTCGTGGGG
TCCACGATCC TCTACCTGGT AGGGGCTGCT GTCGGTCGCG ACCGCACACG CCGCTTCATG
GCGCGGGTAC CCCTGGTGAG CGTCGAGGAC GTCGACAAGG GCGAGGCGTT CTTCCTGCGG
CACGGCAAGA AGGCCGTGTT CCTCGGCTGC ATGGTGCCCG TGGTCCGCAC CCTCGTCTCG
ATCCCCGCGG GCGTCGAGCG CATGTCGATC TGGCTCTTCA TGGGCTTGAC CGGGCTCGGC
AGCCTGCTCT GGAACACGCT GTTCGTCACC GCCGGGTTCC TCCTCGGCGA GCGGTGGTAC
GTCGTGGAGT CGTTCTCCGG CCCGGCCAAG ATCGCCGTCA TCAGCATCGG CACCCTGCTG
GTGCTGTGGT TCGTGCTCGT CAAGCTCCGG GCACGGCGCC TCAGCGCGCC GGTCGTCGCA
CCCGACCCCA CGGCCTGA
 
Protein sequence
MSSATVTPPQ TPSLDGVAGW AVELMETLGV VGAGIAVALA NFFPPIPSEV ILPLAGFTAS 
QGSFGYVEAV VWTTVGSVVG STILYLVGAA VGRDRTRRFM ARVPLVSVED VDKGEAFFLR
HGKKAVFLGC MVPVVRTLVS IPAGVERMSI WLFMGLTGLG SLLWNTLFVT AGFLLGERWY
VVESFSGPAK IAVISIGTLL VLWFVLVKLR ARRLSAPVVA PDPTA