Gene Sked_00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00160 
Symbol 
ID8631655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp16140 
End bp16892 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003312827 
Protein GI269793372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTC AGACGCACGG CCGCAGGACG TCGATCCGGG CGACCCTGTC GGTGACCCTC 
GTGCTCGTCC TGTCCGGGCT GCTCTTCACC GCCAACGCCC GCCTGTCGGG CGGCGAGGAG
AACCGTCAGC CCGAGAACTT CGCGGAGCTG GTACGCCAGG AGGTCGACCG CGGCGACGAG
CTGCTCTCCG AGGTGGAGGG CCTGCGCTCG ACCGTCGACA CCCTCAGCGC CTCGCTCGAC
GTGCAGGCGC CCACCCTCGA CCCCGTCCTC GACGTCAACT CCGGCATCCA GGCCGGGATG
ACCCCCGTGA CAGGACCCGG ACTGCGGGTG CAGCTCGACG ACGCGCCCAC CAACAGGCCC
CAGCCCGAGG AGATCGTCCC GGACGACCTC GTGGTCCACC AGCAGGACCT CGAGGGCGTC
ATCAACGCGC TGTGGGCCGG GGGAGCAGAG GCCATGACGC TCCAGGGGGA GCGGGTGACC
GCCCTCACCG CGTTCCGCTG CGTCGGCAAC GTGCTCTCGC TCCACGGCCG TGTGTACTCC
CCGCCCTACG TGGTCGAGGC TGTCGGCGAC CCCGACCAGC TCCGCGCGGC GCTCGACGCC
TCGGGCCCGC TGAGCATCTA CCGGGAGTAC GTCGCCGCCG TCGGCCTCGG TTACGACGTG
CAGGGCCAGG ACCAGATCGA CGTCCCGGCC TTCACGGGAT CGCTCACCCT CGAGCACGCC
ACCGTGCCCG AGGGTGTGGA CGTGTACCGG TGA
 
Protein sequence
MAPQTHGRRT SIRATLSVTL VLVLSGLLFT ANARLSGGEE NRQPENFAEL VRQEVDRGDE 
LLSEVEGLRS TVDTLSASLD VQAPTLDPVL DVNSGIQAGM TPVTGPGLRV QLDDAPTNRP
QPEEIVPDDL VVHQQDLEGV INALWAGGAE AMTLQGERVT ALTAFRCVGN VLSLHGRVYS
PPYVVEAVGD PDQLRAALDA SGPLSIYREY VAAVGLGYDV QGQDQIDVPA FTGSLTLEHA
TVPEGVDVYR