Gene Sked_00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00140 
Symbol 
ID8631653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp14683 
End bp15543 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content71% 
IMG OID 
Productuncharacterized membrane protein 
Protein accessionYP_003312825 
Protein GI269793370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.322641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CGAGCACGCC GCACGGGGCG GCCGACCAGA CCGTCCCCAC CTGCCCGAGG 
CACCCTGACC GCGTGAGCTA CGTACGCTGC CAGCGGTGCG GCAGGCCGTC GTGCCCGGAG
TGCTCTGTGC CGGCCTCCGT CGGCGTCCAG TGCGTCGACT GCGTCCGCGA GGCGCAGCGC
AACGCCCCCG TGCACCGCAC CGCCCTCGGT GCGCCGCTGC GCGGCGGGCG GCCCGTGGTC
ACCTGGACCA TCATCGGGCT CTGCCTCGCC AGCTACGTCC TCCAGCTCGC AATGGGGTGG
GGCGGCTGGA CGAGCCGGCT GGCCTTCTCG CCCGCCCTCG GCGAGATCGA GCCGTGGCGT
TTCGTCACCG CCGCCTTCGT GCACTCCACG AGCTTCTTCC ACATCGCGCT CAACATGTAC
GCGCTGTGGA TCGTCGGCCC CTACCTCGAG AACCTCCTCG GTCGGGTCCG GTTCACCGCC
CTCTACCTGC TCTCCGCGAT CGGCGGGCAG GTCGCGGTGG TCCTCCTCGC TGACCCTTCC
GGTGCCTCGT GGTTCACCGG GACCGTCGGA GCCTCCGGCG CGGTGTTCGG CCTGTTCGGC
GCGATCTTCG TCGTCATGCG CAAGATGGGG CAAGAGGCCC GCGGGATGCT CGTGATCATC
GGCCTCAACC TCGTGGTCGG GTTCGTCGTC CCGAACATCT CCTGGCAGGG GCACCTCGGT
GGGCTCGTCA CCGGGACCGT GCTCGGTGCC GTGTACGCCT ACGCGCCGCG CGAGCGGCGC
ACCGTGGTGA GCGTGCTCGT CACGGTCGTG GTCGCCGTGG TGCTGGTCGG TGCGGCCCTG
CTGCGTTATT CACAGGCGTA G
 
Protein sequence
MSTPSTPHGA ADQTVPTCPR HPDRVSYVRC QRCGRPSCPE CSVPASVGVQ CVDCVREAQR 
NAPVHRTALG APLRGGRPVV TWTIIGLCLA SYVLQLAMGW GGWTSRLAFS PALGEIEPWR
FVTAAFVHST SFFHIALNMY ALWIVGPYLE NLLGRVRFTA LYLLSAIGGQ VAVVLLADPS
GASWFTGTVG ASGAVFGLFG AIFVVMRKMG QEARGMLVII GLNLVVGFVV PNISWQGHLG
GLVTGTVLGA VYAYAPRERR TVVSVLVTVV VAVVLVGAAL LRYSQA