Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00080 |
Symbol | |
ID | 8631647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 11399 |
End bp | 12226 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003312821 |
Protein GI | 269793366 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.615947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG ACGCCACCGG CAAGCCCACC ACAGCGGGCA GCAAGCCCAC GCAGGGCAGC TCGTCCTCGC GACCGCCAGC ACCACCGGCG CCGCCCGCGA GCCAGAACCC GCCCTCCGTG CCGCCCAAGA AGGCTCCGGG CAGCGCCTCG CCCACCTCGG CAGCCGGCGC CACCAAGGTC TCCGGGTCCT CGAAGCCCGC TGGCGCGACC AAGCCCTCTG GGCCGTCGAC ATCGACCGGT GCGCAGAGTG CCGTGAAGAC ACCTGCGAAG GCCGCGAGCA CGTCGACGAA GCCCTCCACG GGGGCCACGA GCACGGCCCC GCCGGCGACG GGGCCCAGCA AGGTCGGGAC GGTCACGGCC GCCACGCCGA CCGCCGTGCC CCGCACCAGC ACTCCCGGGG TGCCCTCAGC GACGCCGGCA GCGTCGACGA CGCAGACCAG CCCGGCCGTG AAGAAGGCTG CCGCGGGTCC CCGACGCGTC CGTCTCGCCG TCGCACGGAT CGACCCGTGG TCGGCCATGA AGCTCTCGTT CCTGCTCTCG ATCGCTCTCG GCATCATGAT GATCGTCGCG ACCATCGTGT TCTGGATGGT GCTCGACGGC ATGTACGTGT TCACCGAGGT CGACAGGCTG GTCCAGGAGG TCCTCGGCGA CACCGCCGAC GTCAACGTCC TCCAGTACGT CGAGTTCAAG AGGGTCGTGT CGCTCGCCAC GATCATCGCC ATCGTCGACA TGGTGCTGCT CACAGCGCTC GCGACGATCG GGGCATTCCT GTACAACGTG GTCGCCTCGC TCGTGGGCGG TGTGCACCTC ACGCTCATCG ACGAGTAA
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Protein sequence | MSGDATGKPT TAGSKPTQGS SSSRPPAPPA PPASQNPPSV PPKKAPGSAS PTSAAGATKV SGSSKPAGAT KPSGPSTSTG AQSAVKTPAK AASTSTKPST GATSTAPPAT GPSKVGTVTA ATPTAVPRTS TPGVPSATPA ASTTQTSPAV KKAAAGPRRV RLAVARIDPW SAMKLSFLLS IALGIMMIVA TIVFWMVLDG MYVFTEVDRL VQEVLGDTAD VNVLQYVEFK RVVSLATIIA IVDMVLLTAL ATIGAFLYNV VASLVGGVHL TLIDE
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