Gene Sked_00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00080 
Symbol 
ID8631647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp11399 
End bp12226 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003312821 
Protein GI269793366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.615947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ACGCCACCGG CAAGCCCACC ACAGCGGGCA GCAAGCCCAC GCAGGGCAGC 
TCGTCCTCGC GACCGCCAGC ACCACCGGCG CCGCCCGCGA GCCAGAACCC GCCCTCCGTG
CCGCCCAAGA AGGCTCCGGG CAGCGCCTCG CCCACCTCGG CAGCCGGCGC CACCAAGGTC
TCCGGGTCCT CGAAGCCCGC TGGCGCGACC AAGCCCTCTG GGCCGTCGAC ATCGACCGGT
GCGCAGAGTG CCGTGAAGAC ACCTGCGAAG GCCGCGAGCA CGTCGACGAA GCCCTCCACG
GGGGCCACGA GCACGGCCCC GCCGGCGACG GGGCCCAGCA AGGTCGGGAC GGTCACGGCC
GCCACGCCGA CCGCCGTGCC CCGCACCAGC ACTCCCGGGG TGCCCTCAGC GACGCCGGCA
GCGTCGACGA CGCAGACCAG CCCGGCCGTG AAGAAGGCTG CCGCGGGTCC CCGACGCGTC
CGTCTCGCCG TCGCACGGAT CGACCCGTGG TCGGCCATGA AGCTCTCGTT CCTGCTCTCG
ATCGCTCTCG GCATCATGAT GATCGTCGCG ACCATCGTGT TCTGGATGGT GCTCGACGGC
ATGTACGTGT TCACCGAGGT CGACAGGCTG GTCCAGGAGG TCCTCGGCGA CACCGCCGAC
GTCAACGTCC TCCAGTACGT CGAGTTCAAG AGGGTCGTGT CGCTCGCCAC GATCATCGCC
ATCGTCGACA TGGTGCTGCT CACAGCGCTC GCGACGATCG GGGCATTCCT GTACAACGTG
GTCGCCTCGC TCGTGGGCGG TGTGCACCTC ACGCTCATCG ACGAGTAA
 
Protein sequence
MSGDATGKPT TAGSKPTQGS SSSRPPAPPA PPASQNPPSV PPKKAPGSAS PTSAAGATKV 
SGSSKPAGAT KPSGPSTSTG AQSAVKTPAK AASTSTKPST GATSTAPPAT GPSKVGTVTA
ATPTAVPRTS TPGVPSATPA ASTTQTSPAV KKAAAGPRRV RLAVARIDPW SAMKLSFLLS
IALGIMMIVA TIVFWMVLDG MYVFTEVDRL VQEVLGDTAD VNVLQYVEFK RVVSLATIIA
IVDMVLLTAL ATIGAFLYNV VASLVGGVHL TLIDE