Gene Sked_00010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00010 
Symbol 
ID8635440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp137 
End bp1609 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content67% 
IMG OID 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_003312814 
Protein GI269793359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCA CAGACGACAA CATCAGCGAG ATCTGGAAGC AGGCCATCGC CGAGCTCGAG 
GCCAGCCCGG ACATCACGCC TCGCCAGCTG GCCTTCGTGA AGCTCGCCAA GCCGCTCGGG
CTGTTCGACG GCACCGTGAT CATCGCTGTC GCCAACGACC ACACGCGCGA CTTCCTCGAG
ACCCGGGTCC GTGCCGAGGT CGTCCAGGCG CTGTCGAACG CGCTGGGGCG CGACGCGCGC
TTCGCGATCA CCGTCGACCC CGAGCTCGGG TTCGACGAGG AGTCCTCCTC GACCACGTCG
TCGCCGAGCA CCACCGACGC GCCCGCACCG GCACCTGAGC GTCAGGGTCC CCCGGCCCAC
GCCGACATCG CCGAGATCTC CCGTCGCCGC GCCTCCATGT CGTCGGGCTC GGCAGGCAGC
GGCTCGACCT CGGTCGAGCC CGCCCTGCTC AACCCGAAGT ACCTGTTCGA GACCTTCGTC
ATCGGCTCGT CCAACCGCTT CGCCCACGCC GCGGCCGTCG CCGTGGCGGA GGCACCTGCC
AAGGCCTACA ACCCGCTGTT CATCTACGGC GACTCCGGTC TGGGCAAGAC CCACCTGCTC
CACGCGATCG GGCACTACGC CTACAACCTC TACCCCGGGG TCCGCGTCAA GTACGTCAAC
TCCGAGGAGT TCACGAACGA CTTCATCAAC TCGATCCGCG ACGAGAAGGC CGGTGCCTTC
CAGCGCCGCT ACCGCGAGGT CGACTTCCTC CTCATCGACG ACATCCAGTT CCTGCAGGGC
AAGGAGCAGA CGATGGAGGA GTTCTTCCAC ACCTTCAACA CGCTCCACAA CGCCAACAAG
CAGGTCGTCA TCACCTCGGA CCTGCCGCCC AAGCAGCTCA ACGGCTTCGA GGACCGGCTC
CGGTCACGCT TCGAGTGGGG CCTCATCACC GACGTCCAGC CGCCCGACCT CGAGACCCGC
ATCGCCATCC TCCGCAAGAA GGCCAGCGGC GAGCGTCTCG CGGCGCCCGA CGACGTCCTC
GAGTACATCG CCTCGAAGAT CTCGTCGAAC ATCCGCGAGC TCGAGGGCGC ACTCATCCGC
GTCACGGCCT TCGCGAACCT CAACCGGCAG CAGGTCGACC TCGCCCTCGC CGAGATCGTC
CTCAAGGACC TCATCACCGA CGACGACGCC TCGCAGATCA CCGCTGGCAG CGTCATCGCC
CAGACGGCGG CCTACTTCGG CCTGACGATC GACGACCTCT GCGGCAGCTC GCGCTCTCGG
GTGCTCGTCA CCGCCCGGCA GATCGCGATG TACCTCTGCC GCGAGCTCAC GGACCTCTCG
CTGCCCAAGA TCGGTCAGCA GTTCGGTGGC CGCGACCACA CGACCGTGAT GCACGCGAAC
CGCAAGATCA CCGAGCAGAT GGCGGAGCGC CGGTCGACCT TCAACCAGGT CACCGAGCTC
ACGAGCCGCA TCAAGCAGCA GCACCGCGGC TGA
 
Protein sequence
MATTDDNISE IWKQAIAELE ASPDITPRQL AFVKLAKPLG LFDGTVIIAV ANDHTRDFLE 
TRVRAEVVQA LSNALGRDAR FAITVDPELG FDEESSSTTS SPSTTDAPAP APERQGPPAH
ADIAEISRRR ASMSSGSAGS GSTSVEPALL NPKYLFETFV IGSSNRFAHA AAVAVAEAPA
KAYNPLFIYG DSGLGKTHLL HAIGHYAYNL YPGVRVKYVN SEEFTNDFIN SIRDEKAGAF
QRRYREVDFL LIDDIQFLQG KEQTMEEFFH TFNTLHNANK QVVITSDLPP KQLNGFEDRL
RSRFEWGLIT DVQPPDLETR IAILRKKASG ERLAAPDDVL EYIASKISSN IRELEGALIR
VTAFANLNRQ QVDLALAEIV LKDLITDDDA SQITAGSVIA QTAAYFGLTI DDLCGSSRSR
VLVTARQIAM YLCRELTDLS LPKIGQQFGG RDHTTVMHAN RKITEQMAER RSTFNQVTEL
TSRIKQQHRG