Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_4191 |
Symbol | |
ID | 8593916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013518 |
Strand | - |
Start bp | 46054 |
End bp | 52986 |
Gene Length | 6933 bp |
Protein Length | 2310 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310950 |
Protein GI | 268793231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA ATAAGAAATT ATTAGTATCA TTTCTAGCAC TGAATGCGAT ACTAACATCT TATGCACAGG CAGAAACAGT ACAATCGGCA AGATATGAGC GAATGTATAA CAGTATAGTA AAAAATATGG AAAAAGGAAG TTCGAACGAA CAGACTTACC AGACGATACA GAGAATACTG AATCAGAAAA ATAAAGAATT AAAGGATTTA TATTTACAGG GAGATTATAT AGTAAAGCCT GAATATCTGG AATGGCAGGT ATTTTTTACA GGGTTTTATG AAGAATATAA TGAAGGAGTG GATAATACAA AAGAAAATGC AAAGTATCAC TCTAATCCAT TGTATGCACA AAGTGGCTAT TATGATGCAA ATGGTGACTA TATAGTTACA AGTTATTTGA AAAATGGAAT TAGTGGTAAG CCACTGACTC CTGATCAAGT ACCAAAAGAA GTTGAATTAG GAATACGGAT ACCTTTAAAA GGAACAAATA GACAGCCTTT AAATTTAAAT ATTGGAACTC CACAGGTTCC TAATATAGTT ACACCGACAG GAGTTAATAT TACTGCTCCG TTTGTATCAA TTCCGACTAT AAGTGTTCCT GTTTTTACAC CGGTGACAGT AAATGTTCAA CCTGTAACTA CAAATACAAT AACTACAAAA ACTTTTGTAT TTGGTCCCTC TGGAAATGGT GATGCTCAAT GGATAACAAA TAATGGCTCA AATGGACCAT TATCACAAAT TAATTTAGAT GGTAGTCAAG GTATGGGGAC AAGGGGAAGC ATGGATGTCA TTAGTAGAAG TACTACTAAT ACAAATTGGA ATTTTGATTT ACACTTAGCA GATACTGATG CAAAAGGAGT GGATAAACAG GCACATGTTG TAACAAATTA TGGCATACAA AATATAAATT TTACAAATCA AACTCAGAGA TCTGCAATGA AATTAGTAGG TGGTCATGAT ATAACAATTT CAGATATGGA TATTAATTTT GTAGGATCAA ATAGTGCAGC AGGTAATATG ATGCTATTTC ATACCGATGC TCATAATAAC TATAATGATA ATTCTAGTCT TTACAGATCT TCCAGTTGGA TATTAACTTC AAGTACAAAT GTTCGTATGA AAGGACAAAA TGGGTTGATG TTTGGTGTGC AATATCATGG CAATGTCACT GATTCAGGAA TGGTTAATAA TGGACATATC TGGGCAGATA CAGATACATC TTATATTTAT AATGCAACTA CATATACTAT AGATCCAAGA GATAGAACAA TTTTTTATAC AATTGATGAT GGAAGAACAC CAAATAGATA TTTATATTTT GAAAATAATG GAATAATAGA CTTAGATGGG CCAATTGATA TACTTGGAAT ATATGATGTT AATGGGGCAG TAAATGGAGG TTCTTATTTT TTGAATAGTT CCACAGGTAA TATAAATATA AATGGATTAG GTGCTTTAGG TATAGTTGTG AATGATATTC GTACAATGGG GGGATCCTAT ATTAATTTTG TTAAACCTAT AGAGTTAACA GGAGATAATA CTGTTGGTGC AGTAATAAAT AATTCTTCTT TTAGCCCAAG TTTATCATCA ATAAATATAA ATATAGGAAA TACTGCTAAT AAATCGGCAA CTATAGGAAA TGCATTAGGA AATAATGTTA ATTTAGTAGA GGGAGCTGTG GGAATATTTA CAGATAGAGC AACATTAACT GTTACAGCAG ATAACAATAA AGCGAGTAAA AATATAGGCG AACATGATGT TTTCTTTGGA AATTTTGCTA ATCAAAGTTC TCTATTTAGA GCAGATGGTG GAACAATGAC AATAATGGGA ATAGCGGAAG TTGATGCAGG AACAAGTAAT TTAGGAATGG TGGCAACGGG AACAGGAACT GTAACTTTAG CTTCAACAGG AACTTTACTC ATTTCAGGCG GGACAGATAC AATTGGAAAT ATAATAACTA ATTCTAATAA TAGTGGAGCT TATGCACAAA ATAATGGAAA TATTATTAAT AATGGTACTA TTAAGTCAAT AGGAATTGGG ACGAATGCAA TTATTAGCGG AACTTCTGGA ATTGTAACGA ATAACGGAAT AATAGAAAAA AGTAATAATG GCGGAGCTGT AATTTTGTCA GGAGGAAGCT TTACAAATAC TGCTAACGGA GTTATTATTA CAAAAAATGG TTCAGCAGGT GTTTATTCTG ATATAACTGC TGCTCCAGTA ATAAATGGCG GAGTTCTTTT AAGTTCTTTA TCAGGAGTTC CATATTCAGC TTACCATGCA GATTACGGAA CTAAGAATAC CGGAATAATA GCAGATAATG GCGGAATCGC TTATTATTCA GGAGTTAATA CAGGAGTTTC AACTGGGAAT ATAACAGTTT CTGGAACCAA TACTACAATA ATGAACGGCG GACTGATGTT TTATAATCAA TATAAAACAG GTGCAGCACT TGGAACATAT GGAAAATTCA ATATTGCTTC AGGAGCTGGA ATAACAGTAG AAGACGGAGG AACGGTATTT AATTTTGATG GTACACCTAG CGGAGCATAT TTTACATATT CAGCTACAGA TTTCAGTGAT TATATTACAA ATACATTTAC TAATATATCA AATCTTAATA TAAATATGCC GACTACAGCA GGAGAATACG GTAATTTATT TGTATTAAAC AAAACAATTT TTAATTTAAC AACTGCTAAT ACAGCGATAG GGTCAATAGC TGGTTTGGGG TTATCAATAA ATCCAGGTGG AAATTATAGG TTTGGTTTAG TAGCAAACGG AAAATTAAAT ATTGATAATG ATTCTTCCAT AGGATCAGTT TCTAATCCGT ATAATTTAGA TAATCCCCTA GATTCTACCA ATAAAGTATC AGTGGTCAGT TCAGAAATAG AAGTTACTTC CGGAACTTAT GTAAAAGGAA CATTGGCTGG ACAGATATTG GCGAAAATGG CTAATCCTGA TAATACAGCA GCAGGGCAGG CGAAAATAGC AATTGTTAAT AATGGAAATA TAGATATGTC AGGAACAAAC TCAATATCTT TTTATTCACG TTATGGAATT GTCACAAATA ATAATATAAT AAATAGTTCA AATGGAGCAA TAGGTATATA TGGAACTAAT AATACACAAA TTAACAATGT GGGGACGATC AATCTGGGTA ATAACAGTAT AGGTTTAGCT GCAAAAACAC AAGAAGGAAC ATTAAGTATA GCTGGAAATA ATCTTATTAA TATGACAAAT TCTGGAAATA TAATTTCTAA TGGAGCAACT GCGCCAATAG GAATGTATGC TCAAAATAAT AGCTCTTTAA ATAGAGCTGA TGCTAATATT ACAAATTCAA ATACAGTTGA TCTGCGAAAT TCATTAAATT CTATAGGTGC TTATATATCA GGTGGAACAT TTACAAATAC AGGAAGTATG AGCGTAGGAA CAAATGGAAT AGCAGTATTG GCAGATATGA CTGATGTAAA TATGTCTGGC GGTACTATAA ATTTGACAGG AAATAAAGCT GTAGGGTTTC ATTTAGAAAA CGGAAGTAAT ATTACAGGTG CGACAGGAAC AGTTAATGTA GATGGTACTG ATATAGTAAT ATTTAATATA AAAGGCTCAA GTGCACCAAT TCCAAACGGA TTAACAATAA ATCCTACGGC AGGATCAACT TATATTTTAG CTAATATAGA TGAAGGCTTA TTTACAACAG GAGCAGGAAC TTTAACAGCT GGCGCAAATT CTGTTTTAAT ATCAGGAACT AAATCTGGTG TGATGATAGG AGCAGGAACA GTTGTAACAT CTACAGGTAC AAATAGTGTA GCATTGTCAG CTGATCAGGT ATCCACTCCT CCATTAATAT TACCATATAG TGTAGAAGCT GAAAATCAGG GGACTATAGC GCTAGGAGAT AATTCAGCAG CTATTTATGT ATCTAATGGT GCCAGTGGAC TAAACAGTGC TAATATAACT GTAGGAGATA ATTCAGTAGG AATTTTTGGT AAAAACGGAA TGGGAACTAT AAAAAATAAT GGAGTTATAA CAGTAGGCCA GAGTTCGCAG GGATTATATG CGGAAGGTAT AGCACAGGTA GAAAATACAA ATATGATTAA CGGAACTATG GCAAATTCAG TGGGAATGTA TGCATCCGGC GTAACTCCTA TGTTGAACAG CGGGACGATT GATTTAAGCG GAGTAGATTC AATAGGAATG TTCTCTGTAG CTTCTCCGGG AAGTACGGCA GTCATTTGGA ATACTGGAAC TGGAAAGATA AAAATAGGAA ATTCGACTAA TCCTTCTAAT CCGGCAGTAG GGATATACAG TGAAAATGAA GATGAAGTTA TCATAAATGA CGGAGAAATA GAAGTAGGGT CAGGTTCTCT GGGAATATAT AAGTTTGGGC ATCCGACTTT AAGTGGAACT ATTCAACAGA ATGGAAAAAT AACAGTTGGA AGCGGAGGAG TCGGAATATA TAGTAATGGA GATCTAGTTA CATTATCACC AACTTCACAG ATCATGTTGC AGGGTAATAA TGAAGCAGTC GGAGTATATG GGACAAATAA TTCTGTTATA ACAAATACAA GCTCTAATCT TAGTATAGGG AGTAATAACT ATGGTGTAGT ATTAGAAACA GGAGCAGGTT TCGTAAATAA TGCCGCTATA AATATGGGGA CAAATGAGGT TCTGGTCTAT TCAACTGGCG GGGGAACAAT AACAAATAAT TTTCCTATAA CTATGACTGG TGACGAAAAT GTGGCGGTTT ATGCCACAAA TGGAGAATAT GTATCAAATA CTTCAGTTAT AGATGCTACA GGTAAAATAG GAAATATAGG TATTTATAAT AAAAATGGTT ATATATTAAG TACTGGTGCC GGGAAAATAT ATGTAGGGAA TTCTAATGTA CCTGTACCAA GTAACCCTTC AGATCCAAGT AATAAATATG CAGTAGGGCT CTATGGTGAA GGAGCAAAAA TAGAAAACCA TTCAGACATA GAAGTAGGAG CAGGCGGAAT TGGAATTTAT ATAAAAGATA ATAATACAGC AACCATTGCA GAAAACTATG GACATATAAT ACTGAACGGA GCTGGAGCAA TAGGTTTATA TGCAGAGAAT GGAATAATTA TAAATGAAGG AACTATCGAT GTAAATGGTA ATGACGGAAT AGGAATGGCT GGTGTTACTT CAACATTAAT AAACGGAAAT AGCGGGATAA TAAATTTAAA TGCCGATAAT GGTATTGGGA TATATGGAAA TACTGGCGGA AGTATAGAAA ATAAGGGAAC AATAAATATT GGTTCTGGGA ATAACAATAT AGGAATAGGA AAAGGGAGCG GGACTGATAT AGTAAGTGCA GGTGGATTGT TTGGAGAAGG AACAGTTCTG GGAAATACAA CTATAAATGG AAATAAAGTG ATCTCAAGTA TGGGGAATAG CTATCCAACA CCTAGTATAG TTAATTCCGG AGTGATAAAT GTAAGTGAAT ATTTTTCAAA TGAGGGAGTA GTAGTAGCAA TAAAAGTAGA TCCTTCTACA ATAAGACCGG CAGCTGCAGG CTCAGCAGAT GACGGAGCAA AATTTGTAGC AGATTCTGTA CAGATAAATG CACCATATTT TAGTGTAAGT GAAGAAAATC CTGTTCAGAT ACTGGCAAGT TTTACACAGG GAACTAATGC AAATGTTTAT AAATTAAAAG ATGTATTTAA CCCGACAACT CCGGGAGGAG GACCAAATTC CGGAACAGTT CATGTAATAA GTAAATCACT TACTTGGAGA GCAACACCAG AAGTAAATTC TTTAGGGAAT ATAGATATAT GGATGGAAAA AATACCTTAT GATGATTTTA CTAACGGTTT ATGGTATGAA GATTTTGGAT TAGCATTAGA TTCAAAGTAT GGAACCGATG GAATATCTGA CAAAGCGATA GAAATATTCA ACAAAATAGA TATGATTGAA ACAGATCAAG AACCGGAATT CAGAAGAGTA ATGGCAAGTC TTGCAGGAAA TGTATATGCT AATATAAACC AAAGAGAAGA CGACATAGCA AAAACATTTG AAAATTCATT ACATTTATTA CAGGATTCAA CAAATAATAC AAAAGAAAAT GTAAAAATAA GTGTAATAGC AGGAAAAGGT AAAAATAAAG AAGAAACTGA CGGAGCAACA GGTTATGATT ATACGACAAC AGGAGTACTG GCATTAAGAG AAGTGGAAAG AACATATAAA CATACATTCG GTTATTCATT AGGATATGTT CATACAGGCT TTGAATTCAA AGACGGAAAT GAAAGTGAAG AATGGGTAGA TACAATCCAG CTGGGAGTAC ATAACAAGTA TAGATCAAAT GGATGGAAAA TAGTAAATGA CCTGACAGGA AGAGCAAGTA TCCATAATGT GGACAGAAAT ATAGACTGGC CAAGCCCAAA CAGCAGATCA GAAATGAACG GGACATATGA AACATACAGT ATAACAAGTG ACAATATACT CGGGAAAGAA TTCGGATTAG GAAAAAAAGC AAGTATAATG CCATATGGAG CATTCAGAGC AATGTATGTG ACAAGACCTA CATTTAATGA AAGCGGACTG GAAGCCCTTG AGGTGGAAGG AAATGATGCA TGGAGTGCGA AGCCTAGAGC CGGGGTAGAG CTGAAAGGGG CAATACCTTT AGGAGCTAAG ACAGCATGGC AGCTGAAAGG AACACTTGAC CTTGCATATG AATATGAGCT TGCAGACCTT AATGAAAGAG AAAAGGCAAG ATTGGTAGCC ATAGAAGACG GCTATCATAA ATTGTCGAAG CCGGAAGATG AAAAAGGAAC ATTCAGAACA AAAGCGGCAA TAGGAGTAGA GGTAGAAGAC AGATATGGAA TATTCCTTAC AGGAGAGTAC TCAACAGGAA ATGATAAGGA AAATGATTAC AGAGCAGGAG TAACTTTAAA GGCAGTATTT TAA
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Protein sequence | MKRNKKLLVS FLALNAILTS YAQAETVQSA RYERMYNSIV KNMEKGSSNE QTYQTIQRIL NQKNKELKDL YLQGDYIVKP EYLEWQVFFT GFYEEYNEGV DNTKENAKYH SNPLYAQSGY YDANGDYIVT SYLKNGISGK PLTPDQVPKE VELGIRIPLK GTNRQPLNLN IGTPQVPNIV TPTGVNITAP FVSIPTISVP VFTPVTVNVQ PVTTNTITTK TFVFGPSGNG DAQWITNNGS NGPLSQINLD GSQGMGTRGS MDVISRSTTN TNWNFDLHLA DTDAKGVDKQ AHVVTNYGIQ NINFTNQTQR SAMKLVGGHD ITISDMDINF VGSNSAAGNM MLFHTDAHNN YNDNSSLYRS SSWILTSSTN VRMKGQNGLM FGVQYHGNVT DSGMVNNGHI WADTDTSYIY NATTYTIDPR DRTIFYTIDD GRTPNRYLYF ENNGIIDLDG PIDILGIYDV NGAVNGGSYF LNSSTGNINI NGLGALGIVV NDIRTMGGSY INFVKPIELT GDNTVGAVIN NSSFSPSLSS ININIGNTAN KSATIGNALG NNVNLVEGAV GIFTDRATLT VTADNNKASK NIGEHDVFFG NFANQSSLFR ADGGTMTIMG IAEVDAGTSN LGMVATGTGT VTLASTGTLL ISGGTDTIGN IITNSNNSGA YAQNNGNIIN NGTIKSIGIG TNAIISGTSG IVTNNGIIEK SNNGGAVILS GGSFTNTANG VIITKNGSAG VYSDITAAPV INGGVLLSSL SGVPYSAYHA DYGTKNTGII ADNGGIAYYS GVNTGVSTGN ITVSGTNTTI MNGGLMFYNQ YKTGAALGTY GKFNIASGAG ITVEDGGTVF NFDGTPSGAY FTYSATDFSD YITNTFTNIS NLNINMPTTA GEYGNLFVLN KTIFNLTTAN TAIGSIAGLG LSINPGGNYR FGLVANGKLN IDNDSSIGSV SNPYNLDNPL DSTNKVSVVS SEIEVTSGTY VKGTLAGQIL AKMANPDNTA AGQAKIAIVN NGNIDMSGTN SISFYSRYGI VTNNNIINSS NGAIGIYGTN NTQINNVGTI NLGNNSIGLA AKTQEGTLSI AGNNLINMTN SGNIISNGAT APIGMYAQNN SSLNRADANI TNSNTVDLRN SLNSIGAYIS GGTFTNTGSM SVGTNGIAVL ADMTDVNMSG GTINLTGNKA VGFHLENGSN ITGATGTVNV DGTDIVIFNI KGSSAPIPNG LTINPTAGST YILANIDEGL FTTGAGTLTA GANSVLISGT KSGVMIGAGT VVTSTGTNSV ALSADQVSTP PLILPYSVEA ENQGTIALGD NSAAIYVSNG ASGLNSANIT VGDNSVGIFG KNGMGTIKNN GVITVGQSSQ GLYAEGIAQV ENTNMINGTM ANSVGMYASG VTPMLNSGTI DLSGVDSIGM FSVASPGSTA VIWNTGTGKI KIGNSTNPSN PAVGIYSENE DEVIINDGEI EVGSGSLGIY KFGHPTLSGT IQQNGKITVG SGGVGIYSNG DLVTLSPTSQ IMLQGNNEAV GVYGTNNSVI TNTSSNLSIG SNNYGVVLET GAGFVNNAAI NMGTNEVLVY STGGGTITNN FPITMTGDEN VAVYATNGEY VSNTSVIDAT GKIGNIGIYN KNGYILSTGA GKIYVGNSNV PVPSNPSDPS NKYAVGLYGE GAKIENHSDI EVGAGGIGIY IKDNNTATIA ENYGHIILNG AGAIGLYAEN GIIINEGTID VNGNDGIGMA GVTSTLINGN SGIINLNADN GIGIYGNTGG SIENKGTINI GSGNNNIGIG KGSGTDIVSA GGLFGEGTVL GNTTINGNKV ISSMGNSYPT PSIVNSGVIN VSEYFSNEGV VVAIKVDPST IRPAAAGSAD DGAKFVADSV QINAPYFSVS EENPVQILAS FTQGTNANVY KLKDVFNPTT PGGGPNSGTV HVISKSLTWR ATPEVNSLGN IDIWMEKIPY DDFTNGLWYE DFGLALDSKY GTDGISDKAI EIFNKIDMIE TDQEPEFRRV MASLAGNVYA NINQREDDIA KTFENSLHLL QDSTNNTKEN VKISVIAGKG KNKEETDGAT GYDYTTTGVL ALREVERTYK HTFGYSLGYV HTGFEFKDGN ESEEWVDTIQ LGVHNKYRSN GWKIVNDLTG RASIHNVDRN IDWPSPNSRS EMNGTYETYS ITSDNILGKE FGLGKKASIM PYGAFRAMYV TRPTFNESGL EALEVEGNDA WSAKPRAGVE LKGAIPLGAK TAWQLKGTLD LAYEYELADL NEREKARLVA IEDGYHKLSK PEDEKGTFRT KAAIGVEVED RYGIFLTGEY STGNDKENDY RAGVTLKAVF
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