Gene Sterm_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4182 
Symbol 
ID8593910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013518 
Strand
Start bp39845 
End bp41623 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content36% 
IMG OID 
ProductPolypeptide-transport-associated domain protein ShlB-type 
Protein accessionYP_003310944 
Protein GI268793225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA GTATAATATT AGCATTTTTT TTATTAGGAA GCATTGTATT TTCAGCAGGA 
GTGGGAGATA TAATAGAAAG AAATAATGCT GCGATAGAAA ATGAAAGAAG ACAGCAGGAA
TTAGAGAGAA GACAAAGGGA GTTAGAACGT GAAAATTTTG GAAAAGAACC TCAAATAATA
GATGGTACTG ATGAGGTCGA TACAAGTGTA AGGTTCTTTA TCAGAAAGAT AGAAGTGCAG
GATGAATATA ATCTTCTGAA TAAAGCTGAG ATAAAAGCCG TAACGAAGAA ATATCTGAAC
AGAAAGCTGA GCTCCAAGGA TATAAACAAA CTTATGACAG ATCTTAATAA TAAATATATA
GAAAAGGGAT ATATAACAAC AAGGGTAAGG CTTGACGAAA CACAAAACCT AAGTGAGGGA
ACGATAAGAC TGATAACTCT GCCCGGAACA GTAGAGGGAG CGAGCCTGAA TGAAAATACC
TTCTCTGACA GGATGAAGGT ATTTATGTCA GTTCCAAAGA ATAAGAAGAG AATATTAAGA
TTACAGGATA CAGAACAGGC AACAGATCAG TTTAACAGGG TATCAAGTAA TAATGTAGAG
ATAAAAATAG CACCAGGACA GGAAGCAGGA GGCTCTATAC TACAGATAGA AAACCAGCAG
AGCAGGACAT TCAGTGCAAA TATCTCATAT AATAACTATG GAGATGAATC AACAGGAAGA
GACAGAGCAA AGATAGATAT TACGAAGGAT AATCTTTTGG GAATAAATGA CAGTTTTTAT
GCTTCATATC AGAGAGGGAG GAATAAGAGA CCCTTGAGAA ATGATTATAC AGGCTCGTCA
TCAATACCGC CGGGAACGAT AATCAAGGAT AAGGATGATC TTCTTCCAGC AGATACAGAA
GCGGAACCGG AAAAGTTCAA TGAGGACTGG TCATTGAACT ATTCATTTCC GTTCAGATAC
TGGACATTCA GTACAGGCTA CAGTCATTCC TACTATATAA GCAGCAGTGA AGGATATAAC
GGACTGTATG ATACAAGCGG GAGATCAACC CAGTTTAATC TGAATGCAGA CAGAGTGGTA
TACAGAAATA AAATGAGTAA GATAAGTATA AACGGAGGAC TAAAGCTAAA GACAAACCAG
AATTACTTTG AAGATGTCCA GCTTGTAGAC AGGAGACTGA CAATAGGAAG TCTTGGAATA
AATTACAGCA GAGGCTTCTT TGGAGGAATA CTGGGATTTG ATGTTTCATA TGACAGAGGA
CTGCCGTGGT TCAGATCAGC AGATGATCAT GAAAAAGAAA TCGATGATCC AAAGGGAAGA
TTTGACAAGT ATGGAGTTAA TATAAACTGG TATAAGCCGA TGACAATAGG AAAGCAAAGA
TTTACATATA GACTGGTAGG AGTAGGACAA TATACACAGG ATGTGCTTTA TGGAAGTGAA
AAGATAAGTA TGGGAGATGA ATATACAATA AGAGGATATA AAGGAGATTC CATATCAGGA
GATAAAGGAT ATTATGTAAA AAATGAGCTG TCATATAACT TAAATATATC CAAGATAGGA
AGTATATCGC CGTATATAGG CTATGATTTT GGAGAGAGCT GGAATAATGA GGTGCATGAT
ATATACAGAT ATGGATATAT GAGGGGATTT GCAGTAGGAG TAAAGTATTA CGGGGAAATA
TTTAATTTTG ATATAGCATA TACGAAGCCT GATAAGGCAT CAGGATATGT AAGCAAGCCT
GAAGATGAGG TATATGTGAC ATTTGGAATA AAATTTTAA
 
Protein sequence
MNKSIILAFF LLGSIVFSAG VGDIIERNNA AIENERRQQE LERRQRELER ENFGKEPQII 
DGTDEVDTSV RFFIRKIEVQ DEYNLLNKAE IKAVTKKYLN RKLSSKDINK LMTDLNNKYI
EKGYITTRVR LDETQNLSEG TIRLITLPGT VEGASLNENT FSDRMKVFMS VPKNKKRILR
LQDTEQATDQ FNRVSSNNVE IKIAPGQEAG GSILQIENQQ SRTFSANISY NNYGDESTGR
DRAKIDITKD NLLGINDSFY ASYQRGRNKR PLRNDYTGSS SIPPGTIIKD KDDLLPADTE
AEPEKFNEDW SLNYSFPFRY WTFSTGYSHS YYISSSEGYN GLYDTSGRST QFNLNADRVV
YRNKMSKISI NGGLKLKTNQ NYFEDVQLVD RRLTIGSLGI NYSRGFFGGI LGFDVSYDRG
LPWFRSADDH EKEIDDPKGR FDKYGVNINW YKPMTIGKQR FTYRLVGVGQ YTQDVLYGSE
KISMGDEYTI RGYKGDSISG DKGYYVKNEL SYNLNISKIG SISPYIGYDF GESWNNEVHD
IYRYGYMRGF AVGVKYYGEI FNFDIAYTKP DKASGYVSKP EDEVYVTFGI KF