Gene Sterm_4181 details

Gene Information

• Locus tag: Sterm_4181
• ID: 8593920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013518
• Strand: -
• Start bp: 32174
• End bp: 39817
• Gene Length: 7644 bp
• Protein Length: 2547 aa
• Translation table: 11
• GC content: 32%
• Product: adhesin HecA family
• Protein accession: YP_003310943
• Protein GI: 268793224

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAG GGAAAAGATA TAACATTGTA AAAAGGAATA TAGCGCTAAG TATATTATTG 
GGTATGTTTT TGAATAGCAT GAGTTTTGCA AATTCATTAA TAAAAACAAG AGATGGCTCA 
ACAGCAAGAG TAATAACAGC ACCGAATGGA ACCCCAATGA TTGAACTGGC GAATCCGGGA 
AATTCAGGTG TGTCAGTAAA TGATTTTGAC AGACTAAGTG TAGATGAGAA AAACCTGATA 
TTAAATAATA TCTCATCCAA AGAAGGAATT GGATATAGAA GTGAACTTGG AGGAATAATA 
GCTCCAAATG AAAATTACAC AGGAAATCCT GCAAGAGCAA TTTTGTTAAG AGTACATAAA 
GATCCGTCAG TAATAAACGG TTTTATAGAA GCAGCAAGTA CGGGAAAAGT AGATATGTTT 
CTAAGTAATC CCAATGGAAT ATACTTAAAT GGCGGTTTGG TAGGGAGATT TGGAAATGTA 
ACCTTCACAA CAGGTCATGT AAGTGATGAT TTAATGACAG TTATGGTAAG GGATGGTAGG 
ATAGAGATAG GTGCTGGTTT CAATGGAAAT GCAGCAGAAA ATTTAAGTCT GCTAGCAAGA 
AGTATTCAGG TAAATGGACA ATTGAATGGA AATGATTTAA CATTAATAGG TGGACAGTAT 
GATTATAACA CAGGAACAAA AGAAACAGTA AAACAGGGGG ATAATCCAGG AGAGGTATTA 
GTATCAGCCT CAGTAGTAGG AAGTATTTAT GGTCGTAACA TTTACTTAAA GGCTGTAGGT 
GGGGATTTAG CGGTAAAAGG ATCATTGGTA AGTGAAAAAG TTTTGAAATT GAATGCTGAC 
GGTACAGTTG TGACTGAGAG AAGCCAAGGC TTAGAGGAAG TCGAGGTAAA GGCAAAAGAA 
TTTATTCAGG AAGGTTCAAC ATATACTGAG GGAAAATTAA CAATAGAAGC AAATAATACA 
ATATTAAAAG GAACAGGAAC ACAAGCACAG GAAATAGAAA TAAGTGGAAA TTTAAATAAT 
GAGAGTAATC TTTATTCAAA GAGCAATGTG ACTGTAGGCG GAGATACTAA AAATAAAGGA 
CAGCTAATAT CAGAAGGAAG CTTAGAAATA AAAGGTAATC TAGAATCAGA TTCATTAGTA 
TACGGAAAGA ATTCTGTAAA AGTAGGGAAA GACTTAACTA ATAAATCGGA TTTACAAAGC 
GAGAACGGGA TTGCTGTAGA GGGTAATGTA ATAAATACCG GAAAAGTTAT ATCTGATAAG 
GATTTAACTA TAAAAGGAAA TGTAAATAAT GCGGGAACAC TTTATGGAAA AGACAGAGTT 
ACAATAGATA AAAATCTAAC AAATGCAGGA AGTGTTCAAA CAACAGGAGA TTTAACAGCT 
AAAGATACTG TCAATACAGG GAAGTTAACT GCAGAAGGTA ATGTCAATGT AGAGGATTTA 
GATAATAATG GGGAAATAAT AACAAATAAA AAACTTGTTA CAAAAAACCT TGAAAATAAA 
AGTACAGGAA AGATAACAAC AGGAGAAGGA ATAGATACAG CAGGAAATGC AGTGAACCAT 
GGACAAATAA ATACAAATGG TAATTTTGTG ATATCTTCTA ATCTTGAAAA CTACAATATA 
ATTAATGTAG GAGGATTAGT AAATACAAAA GACTTAGCAA ATACAGGAGT ATTAAAAGTA 
TCAGATAAAA TAGTGTCAAA AGGCTTTAGT TTTAGTAACA CTGGAGAAAT AGTAACAGTA 
AATTTAGATG TGGATAGTAC AAATATCATA AATACAAATA AGATAACAGT AGTAGAGACA 
TCAAAATTAA AAGGAAGCAG CAATATAAAT AATCAAGGAA CAATAGCTTC AAAAAATATA 
GAGATAACAA CACCAGTATT AACAAATAGC GGTCAGATAT TAGCAGAAGA AGTGATAACA 
GCTAATAATA CAAGTTTAAC AAATACAGGA AAGCTGGCAT CAAATGGCAG TATAAACTTA 
AATAATACAT CAATAGTAAA TAGAAGTTCA ATAGAATCAA CAACAATAAA TTTACAAAAT 
ATATTTTCTT ATGATAATAA TACTGGGATA ATAAGAGGAA ATAACATAAC ATTAACATCT 
TCAGGGAATT TACTTCTTGA AGGTAAAATA CAGGGAATAA ATAACTTGTT AATATCAGGA 
TTTGATATAA CAAACAATGG AAATACAATA AGCTCAGGGT TATTAAGATT ATCTGGAAGA 
GATATAACGA ATAACTTAAC AATATCAGCA GGTAATGTGG AATTACTGGC AACAGGAAAT 
ATACTGAATA ATTCCATGAT GGAAGGAGAA AGTGGAAAGT TATCAGGAAA TAATATAACA 
AACAAGGATT TGATAATATT TCTTGATAAA CTTGATATAG AAGGAACAAA GCTTGTAAAT 
AAAGATGCGT CAGTATATAG TGATAATGAG CTGAATATTG TGGCAGGAGA TGTGGATAAT 
ACTGGTGGAG AAATAGTAGG ACAGAGTACA CTGAATATAA CAGGCTTTAA TTTACTTGAT 
AATACGAAGG GAATAATAGA CAGCAGAGGA AATATACTGT TAAGCGGGAA TAAGCTTTTA 
AACAGCGGAG AAGTATCGGG ACAATATAGA TTATACTGGA TAACTTGGGA CGGACAGTAT 
ATTTATGATG ATGTATGGAG AGAGCTTGAT GATGCATATG CCCAGACAGG AAACAGTAGT 
TTGATAACAG GACTGGATGA TTGGAAAATA GGGATAGCAA AGTCTAATAT AAATGGTGGA 
ATAAACAGGG AAAAAGAATT TACAAAAATA AAAGATTCAA CAGATTATGA TTTATATTAT 
GGATATATGT CAGGAAACCT TACAGCTTCA AATGCAACAT ATGAAACACA GGTATTAAAA 
GGTTATGTAG ATACAAGCAG ACTTGTGACA GAAGGCGGAA GAATATTATC AGGAGGAAAT 
CTGACACTTG ATGTAAAAGA AATAGAAAAT AGAAATTCAA AAATAAGTTC AGGCGGGACA 
TTAAGAATAA CAAATAAAGT AGAAAAAATA GAGAATGTAA CAGATGTAGC GACAATAAAA 
GTATATGACG GAACTGAAAG ATTATCATTA TGGCAGACAA TGTGGACAAA CGGAAGTGGA 
AATACAGTAT ATGGTGATGC AATAGGAGTA AGAAGAGATC TTGAAAGTAC ATCAAGAGAC 
TATAACATAG CAGACAGTGC ATCAGTAATA GAAGGAAATA ATGTAATAAT AGAAGGAACA 
CCGACAATAA ACAATGGTTA TGATTACAGT AAAATAGGAA CAGGAATTGT AATAGATCCA 
AGTACAATAA CATCAAAAGA TGTAGATGTA GATTTATATT ATGATCCTGT AACAGTACAT 
GTAGACAGAA CAGCAGTAAT AGATATAATA ACAACAGGAA CAATACCATT TAATCCGGGA 
GTATTTACAA GTTCACAGAG TAAATTATTT GCAGAAAGTA AAGACCCGAC ATCCAAGTAT 
TTAATGGAAA CAAGATCACA GTACATAGAT TTATCAAGAT TTTTTGGAAG TGACTATTTC 
TTAAGTAAAA TAGGATACAA CGAATCAAAA GACTGGAATA TGGCAAGAAG ATTAGGGGAT 
GCATATTATG AAACAAAGTA TATGAATAAT CTTTTATTAG AGACATTAGG TACAAGATTC 
ATAAATGGAA AAGCAGATAC AGAGTTAATG AAGGAAATGC TTGATAATGC AGTGGCAACA 
AGCGGAGATT TACAGCTAAC AATAGGAGTA GCTTTAACAG GAGATCAGAT AGCAGCATTG 
AAGAGTGATA TAATCTGGTA TGTGGAACAG GAAGTAAATG GTGAAAAGGT ATTGGTACCA 
CAGGTATATT TAAGTCAGGC AACATTGGAG AATATAAAGA GTCCTACAAC AACAATATCA 
GCACAGGAAA CACTTGCAAT AAACAGCAGC AGTCTTGTAA ATCAGGGAAG ATTATCAGGA 
AATACAGTAT ATGTAAATAC AGATAATCTG ATAAATAAGA GTGTAGGAGC ATTAACAGCA 
GAGATAACAG GAACAAATAT ACAGATAGAT GCAAAAAATG ATATATTGAA TATAGGGGCA 
GTAATATCAG CGAAAGAAGA CTTAATGTTA ACAGCAGGGG GAACGATAAG CAATATAACA 
ACTGGTGTAG AAACAGTAGT AAATGACAGA TTAAGAGGGG AAGAAAGAAA TTATACAGCA 
GATAGTGTTC AGAATGCAGG AGTAATAAGC TCAGGAAATA TAACATATAT CAGTGGAGAA 
AACTATGTAT CAAGAGGAGC AGTAACAGAA TCAGGTGGAA CAACATATAT AGAAGCAAAG 
AAAGATATAT CAATAAATAC AATAAATCTG AGAGAATCAG AAAGAGAAGG AATAAAGAAC 
GGTTATCAAT ATACAGAAGT AAATCAGAAA TTAGGTTCGG AGGTAACAGG TCTTGACAAT 
GTTATAATGA ATGCCGGAAA TGATATAAAT ATAAAGGGAA GTACGGTAGC ATCAGACGGA 
ACAGTACAGT TAACAGCAGA AAATAACATA AATATATCAA ATGATAAGAA TACAATGTAT 
CATGAGGAAA AGGAAGAGAA GAAAGGAACA TTTTCAAGTT ATTACAGATA TGAGACGGAT 
TACAGTGAAA GTGCAGTGGG AAGTACATTA ATAGGGAATA ATGTAATACT GGATGCAGGG 
AAAGATGTAA ATATAAAAGC ATCAAATGTT ATAGCAGTAA AAAATGACAA TATTCAAAAC 
AGTGGTGGAA ATATAATAGT AACAGCGGGA AATGATATAA ATATAACAAC AGATGACATG 
AATAATGAAT ATTCTCTGAC AGAAAAGAGA AGTGGATTTA GTTCAAGCTT TTCAACAGGA 
GGCGGTGGTA TATCAGCAGG AGTGAGTTAC AGCAGAAGTA GTCTTGAAGT AAACAACACC 
AGCACCACAG TGGCAGTATC AAGTATAATG TCAGAAGGAA ATACAGTATT AGAAGCAGGA 
AACAGAGTAA GAACAGAAGC AATGCAGGCT GATATTGGAG AAAACCTTGT AATAAGGGGG 
ACAAACGGAG TAGAACTTCT GGATGCCAAA GAAGTATATG AGGAAAAAGT AAAACAGAAG 
AGTACAACTA TAGGAGTGAA TGTAAATGTA GGATTTACTC CTGCTCAACT GGCAAGTACA 
ATAAGTGATG TAGCAGATAA TGTAAAAGAC TATGGATTTG GAAATAGTTC GCAAAGTATA 
AATACAATAG GAAATGGGAT ACAGGACTTA AGAAATGTAA CCCAATTAGG TGGAAATTTA 
TATGAAGGAA TAAGATATGG CAGCCAATAT TTAAACGGTC ATATGAACAT GGGAGTTATG 
GAAAATGCTA AACAAAATGC ATTGAGTAAT TTAGTATCAG CAAGTGTAAG TGCGAGTTAT 
AATCAAAGTA GCTATGAATC AAATAAAAAC GGAACAAATT CAGTGGCAGG AGTCATTAAC 
GTAGGAAATA ACTTTATAAT ACAATCAGAA GGAGATGTAA AATTAGTAAA TCAAAAAGTG 
ACAGTAGGAG ATAATTTTAT AGTAGATGCT AAGAATTTTG TAGCACTAGC TGGAGAAAAT 
ACATATAGTA ATAATACAAA ATCAAGTTCT AGTGGAATAA ATGCAGGTTA TGATATAGTT 
AATAATCATG TAATAGGTGG AGCGAATATC TCTGGTGGAA AATCAAATAC AGATTCTAAG 
TATTATGATA ACACAACAAT AAATGTAGGA GGAACATTCC AGCTTACAAC TAAAGAGGAT 
GCAACTTTTG CTGGAGCTAA TGTAACAGCT GATAAAATTA ATTTTGATAT AGGTAAGGAT 
TTGAATATAA TATCTTTGCA GGATGAATAT AAATCAAATG GAAGTAGCTA TGGCGTAGGT 
GTAGATGTTT CAGGGAAAAT GCCAGGAAGT AATAAGGAAG AAGGATATGC AATACCATCA 
TTAAATGGAA GTTATAGTCA GGATAGTGCA GATTCTAAAT GGGTGAATAA CCAGACATCA 
ATAATAGCAG AAAATGGTGG AAGCATAAAG GTTGGTGAAA CTTTAACTAA CGTAGGATCA 
ATAATAGGAA GTTTAAATCC AAATGAAAAA TTGAGTATTG ATGCAAATAA AGTGGTAGTA 
GAAAATTTAA AAGACCATGA TAATGGAGAA AATTCTGGAA TCCAGTTAAG TGGAATAAGT 
AAAGATACCT TAATACCACA AACAGGAATA CAATATGGAA GTCATGATAA ACAGCAGGAT 
AGTAATGCAA CATTTGTAAA TACTGAAGTA ACAGAAGCAG GAAAAAAACT TGATTTGGAT 
GAACTGGGAA TAAATACAGA TATAAATAAG GCTCAGGTAA TAACAAAAGA TGAAGTTGTA 
GAGCAGATCG ATACAGTACT ACACACAGAT TTAGGGAATC AAAAGGTAAG AGATCAGTTT 
GTGGAGGATA TATTAAAAAC AGTATCATTA GTTCCAGAAA TAGTGCAGGG GATTCAAGAA 
GGAACTAAGA ATGAAGGAGA GACAATACTA GGTCAAATAT CAAATAATAT GGGTGAGAGA 
TCAGATGATA TAAAGGCTTT TGTTGAAGGA AGAGATAAGA AGCTACAAGA GCAGTTAGAT 
AAGTATAAAA ATGAAGATGG GAAAATTGTA ATGGATGCAG ATGCTCAAAA ACTGATTGAA 
GATAGTTTAC GTCAAACCTT AGAAGAATTT GGGAAGGGTG ACTATAAAAT AGAATTTTTT 
GAAGGTGATC CTGATCAAAT AATGGGAGTA GATGATAAAA ATGGTATAGT TTATATTAAT 
GTAAATGGTC ATGGAGCAGG TAATGCTGAA GAAATGAGAA AGAATATGCA ACATGATGGA 
TCTCATGGGA CTTATGTTAA TAAAGATGTA GACGAAGATT CAGCAAAGAA AGTAGGACAG 
ATTAATGGAG ATAGAACGGA ATCAAATTTA ATTGCTGATG AGAGTATAAA AGATAAAATT 
AAAGAAGGAA CAGATGCTTA TAATAAGGCT GTTGAAAATG GAGATATTAG AAATTTGTTA 
GATAAGGTTG TTGATGTTAA AAATAGTAAA TATTTTGATG CAGCACAATC AACTTTAGAT 
AAAGTTTGCA GTGGAAGAGC AGAATGTCTT GGTGAATTAT ACGGATTTAA AGAAGAAGAT 
GCAAATAAAA AGAATAATGA AAATAATCTT CTTATTTTTA CTGCTGATTT AGCTGAGACA 
GCTTTAATAG GTGGTTTGAC AGCATTTATT CCTGGATCAT TTGTAATAGC AGGAAAAACT 
ATAACAGTAT CGAAAGTAAT ATCATCAGGT GGATCTGTAG CAAAAATTAT TTATGATGCC 
AAAGATATTA TAATGGATGA TAACACTAGA AAGGAACTCT ATAAATTGAC AGTAGCTAAG 
ATTGAACTGG AAAGAAGTCG TGTAGCAGCA GATATTTACT CTAAAGAGTA TCATGAATTT 
TATGAGTTAT TTTCAAGTAA TGGAACACTT TATTTTTCTG AAAGACAAAT GAAAGCATAC 
AATGCAGGAA GAAAAATTTT TGGAAAATCT GTATTAAGTG AAAAAGAGAT AAAAGATAGG 
ATATGGAGAT TGAATAATTA TATGAGCTCT GGAAATCCGG ATTATTATCT TGAGCCGAGG 
AGCTTAGAAA GGAAAGTCAA ATAA 

 

Protein sequence

MKKGKRYNIV KRNIALSILL GMFLNSMSFA NSLIKTRDGS TARVITAPNG TPMIELANPG 
NSGVSVNDFD RLSVDEKNLI LNNISSKEGI GYRSELGGII APNENYTGNP ARAILLRVHK 
DPSVINGFIE AASTGKVDMF LSNPNGIYLN GGLVGRFGNV TFTTGHVSDD LMTVMVRDGR 
IEIGAGFNGN AAENLSLLAR SIQVNGQLNG NDLTLIGGQY DYNTGTKETV KQGDNPGEVL 
VSASVVGSIY GRNIYLKAVG GDLAVKGSLV SEKVLKLNAD GTVVTERSQG LEEVEVKAKE 
FIQEGSTYTE GKLTIEANNT ILKGTGTQAQ EIEISGNLNN ESNLYSKSNV TVGGDTKNKG 
QLISEGSLEI KGNLESDSLV YGKNSVKVGK DLTNKSDLQS ENGIAVEGNV INTGKVISDK 
DLTIKGNVNN AGTLYGKDRV TIDKNLTNAG SVQTTGDLTA KDTVNTGKLT AEGNVNVEDL 
DNNGEIITNK KLVTKNLENK STGKITTGEG IDTAGNAVNH GQINTNGNFV ISSNLENYNI 
INVGGLVNTK DLANTGVLKV SDKIVSKGFS FSNTGEIVTV NLDVDSTNII NTNKITVVET 
SKLKGSSNIN NQGTIASKNI EITTPVLTNS GQILAEEVIT ANNTSLTNTG KLASNGSINL 
NNTSIVNRSS IESTTINLQN IFSYDNNTGI IRGNNITLTS SGNLLLEGKI QGINNLLISG 
FDITNNGNTI SSGLLRLSGR DITNNLTISA GNVELLATGN ILNNSMMEGE SGKLSGNNIT 
NKDLIIFLDK LDIEGTKLVN KDASVYSDNE LNIVAGDVDN TGGEIVGQST LNITGFNLLD 
NTKGIIDSRG NILLSGNKLL NSGEVSGQYR LYWITWDGQY IYDDVWRELD DAYAQTGNSS 
LITGLDDWKI GIAKSNINGG INREKEFTKI KDSTDYDLYY GYMSGNLTAS NATYETQVLK 
GYVDTSRLVT EGGRILSGGN LTLDVKEIEN RNSKISSGGT LRITNKVEKI ENVTDVATIK 
VYDGTERLSL WQTMWTNGSG NTVYGDAIGV RRDLESTSRD YNIADSASVI EGNNVIIEGT 
PTINNGYDYS KIGTGIVIDP STITSKDVDV DLYYDPVTVH VDRTAVIDII TTGTIPFNPG 
VFTSSQSKLF AESKDPTSKY LMETRSQYID LSRFFGSDYF LSKIGYNESK DWNMARRLGD 
AYYETKYMNN LLLETLGTRF INGKADTELM KEMLDNAVAT SGDLQLTIGV ALTGDQIAAL 
KSDIIWYVEQ EVNGEKVLVP QVYLSQATLE NIKSPTTTIS AQETLAINSS SLVNQGRLSG 
NTVYVNTDNL INKSVGALTA EITGTNIQID AKNDILNIGA VISAKEDLML TAGGTISNIT 
TGVETVVNDR LRGEERNYTA DSVQNAGVIS SGNITYISGE NYVSRGAVTE SGGTTYIEAK 
KDISINTINL RESEREGIKN GYQYTEVNQK LGSEVTGLDN VIMNAGNDIN IKGSTVASDG 
TVQLTAENNI NISNDKNTMY HEEKEEKKGT FSSYYRYETD YSESAVGSTL IGNNVILDAG 
KDVNIKASNV IAVKNDNIQN SGGNIIVTAG NDINITTDDM NNEYSLTEKR SGFSSSFSTG 
GGGISAGVSY SRSSLEVNNT STTVAVSSIM SEGNTVLEAG NRVRTEAMQA DIGENLVIRG 
TNGVELLDAK EVYEEKVKQK STTIGVNVNV GFTPAQLAST ISDVADNVKD YGFGNSSQSI 
NTIGNGIQDL RNVTQLGGNL YEGIRYGSQY LNGHMNMGVM ENAKQNALSN LVSASVSASY 
NQSSYESNKN GTNSVAGVIN VGNNFIIQSE GDVKLVNQKV TVGDNFIVDA KNFVALAGEN 
TYSNNTKSSS SGINAGYDIV NNHVIGGANI SGGKSNTDSK YYDNTTINVG GTFQLTTKED 
ATFAGANVTA DKINFDIGKD LNIISLQDEY KSNGSSYGVG VDVSGKMPGS NKEEGYAIPS 
LNGSYSQDSA DSKWVNNQTS IIAENGGSIK VGETLTNVGS IIGSLNPNEK LSIDANKVVV 
ENLKDHDNGE NSGIQLSGIS KDTLIPQTGI QYGSHDKQQD SNATFVNTEV TEAGKKLDLD 
ELGINTDINK AQVITKDEVV EQIDTVLHTD LGNQKVRDQF VEDILKTVSL VPEIVQGIQE 
GTKNEGETIL GQISNNMGER SDDIKAFVEG RDKKLQEQLD KYKNEDGKIV MDADAQKLIE 
DSLRQTLEEF GKGDYKIEFF EGDPDQIMGV DDKNGIVYIN VNGHGAGNAE EMRKNMQHDG 
SHGTYVNKDV DEDSAKKVGQ INGDRTESNL IADESIKDKI KEGTDAYNKA VENGDIRNLL 
DKVVDVKNSK YFDAAQSTLD KVCSGRAECL GELYGFKEED ANKKNNENNL LIFTADLAET 
ALIGGLTAFI PGSFVIAGKT ITVSKVISSG GSVAKIIYDA KDIIMDDNTR KELYKLTVAK 
IELERSRVAA DIYSKEYHEF YELFSSNGTL YFSERQMKAY NAGRKIFGKS VLSEKEIKDR 
IWRLNNYMSS GNPDYYLEPR SLERKVK