Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_4100 |
Symbol | |
ID | 8599544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 4367633 |
End bp | 4374310 |
Gene Length | 6678 bp |
Protein Length | 2225 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310863 |
Protein GI | 269122686 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAA GTAAAAAAAT GCTTGCTCTA CTGGCATTAA ACACTTTAGC AGCAGTTTCG GGAAAAGCGG CAGAAACCAA AACTGACAGA TTATACAAAA ATATTACAAA AAACATTCAA ACAGGAAAAT CTAACAGTGC AAACTATAAG CTTATAGAAA GTATACTTAA AGAAAAAAAT AAAGAACTAA AAGATTTGTA TCTACAATCT GACTATATTA TAAAGCCTGA ATATCTTGAG TGGCAGGTTT TCACGAGCGG AGTATACAGC TATAAAGACA GAGGAGGAGA AAAAGATACA GTAACCAACA AAATAAATTC CGAGGTAAAA TCAGTAAATC TGGGTATGGT TATCCCTGTA ACAGGAATGA CAAAAAGTCC TCTTTCATTA AATATTACAT CCGTAGATGA GCCTGATATA AAAGTAACAA CACAATCAGT AACAGCTCCG CAGGTAACAG GACAAACGGT AAATTTCAGC GGTATTGAGA TTCCTTCTGC TCCTAATTTA ATTCTTGTCG CTGATGTCAA TGCAAATGAG CTTTCTATAG AAAGTATAGG CAGTAATGCT TCCAATGTTG CTTATTATAC CAGCGGAGGT ATGATTTTTG AAAATTTAAA TGTAAATACA AACAATACAT CCCTTACTTT GGATACTTCT ACCCGTAATA TAGATATCTC AGGTGAAATG TCTTATGTAA ATGGTTTATA TTCAGGTGTT TCACAATCTT CTTATACACA CACAGGATAT ACTGATAATT TTGCAGTACA TAACATAGGT CTGAGCGGGA ATTTTGAAAT AAAAGGAAAC TGGGATATGA CTGTAAATGA CACCGGCTCT TTATGGAGAC CTGTCGGCTT TATTAATTAC AGACCATACT CCATAACAGG TGATTCTAAG ACTACTTTTT CCGGAGACCT TAATCTGGGT ATAACTTCAG ACTATGATAC GTCAGACACT CCATTAGTCG GGATGAGTCT TAATCTGTCA TCACCTGTTT CTGATAACCA TAAAGCAGTA TTAGAAAATA CCGGAACTAT AACATTAAAA GATAATCCTA CAGTCGAAAC TATTATCGGG ATGCAGCTGG ATAAATCAAG TGCTGCCTAT ATACGGAACG GGGAACTGAT AAACTCAGGT CATATAATTG TGGAAAGCAG TACTGAAGAC CCTTCTTATC CCGGCACTTA CTGGGGTGGT GATATAGGAA CTGCAGGTAT GTTAGTCTCT GCCCTGCCAT CTTCCAGCTC GGTATTGGTA AAACCAGGAA ATATAACATT AAAAGGTGCC GGAGCCAACG CTCTAGAAAT AGCAGGGGAT TCTTATAATA CAAATGTAAA AATAGACGGT ACAGGAGGAC AGTTGGTAAT AGAAGGTGTA CGAAATACTG CCCTGTTTCT TGGCGGAGAT CTTAGCAGCA GCGGAACCAG CTCATTAGAA AATGTAAGTA ATTTAAATAT CTTTTTAAAT GGTGATACTA CTTTTGCTTT AATTTATGGT CAGTCCAGTT CAAGTAATGT ATATTTACCT GTAATTTTAA ATGATTCAAT AATAAACACT ATGGAATTTG GTGAAAATTC AAATCAAAGT GCAATAATAT ATAACTCAGG TGTAGGATCT ACAGACTTAA TTTTAGAGAG CAGTCTGGCA AATGCTTTAG GTCAGATAAA TTCAGGAACA TTAAATGCAA TAGCCATAAC TAATTCAGGA ACATTAAAAA ACTATATGCC TATCAATATA GGCTCTGGTG CCATAGCAAT GAAAGGAATA GTATCAAGTA ATTCATCCAC TGAAAACTAT GCCGATATAG TGAATTATTC TACAGATGGT ATTTATAAAC GATATACATA TACTTCTGAT GATGAAGGTA ATCCTATTAC AGAGATTGAA GAAATCCCTG TCGGAGGTAT AGGATTGGCT GCTCCCTATT ATGATACTTA TTATAATTCA TATATATCAA ATCGTGGAAA TATAGAAATG GGAGGAAATT ATTCCACAGC AGTCTATAAT TTTGATGATA ATTTTGTTTC GGAAAGTGAT CATATAACGG CAAACGGAAA TATGGCAACA GCTATATATG CTGGTTCAAA TAGTTTAAAT CAAATTTCAA ATACAAATAT AAAAGCTGAT AAGCTTATGG TAAAAGGAGA AAACGGAACT GTTTTGAATT CAAACAGTGC TCATATAAAT ATAGGTTCTT TCACATCAGG ACAAGCTATG GAATTAACTG CTGACGGGAA CAATACATTT GCTTTCTATT TTAAAGAATA CGTAGACATG TGGGGCAATG CAATTCCTTA TTTAGGTAAA GTAACACTAA CCAGCAATGT AAATGCAAAT CTGAAAAACG GTGCAGTAGG TTTTTATTAC AAAGGAGATG GTACAGCTAA TACAGCAGAC TTTTATTCAT TTCTTGACAC TGTTGTAGAT ACTTCCGGGA ATAACCTTAC TGTAAACGTG GATTCTGATT CATATAAAAT AGCTATTGAC AATGCTAAAG TAAATTTAAG CGGTCTGTTA AACAGTGCAA ATACCTCGGG AATTAACTTT ACAGGAACAG ACAGATCAAA AATTTACAGA TCAAAAGTAA TAATTGATAT TGATTCTAAT CTTGATAAAA ATAATTCTGT TGGAGATAAA AGCTATTCAA ATATGGAAAT AGGAAATTCA GGAATAGATA TTAGCAGCGG AATAACAGTA AGCGGTACTG AAGAGGGACT CGGAGGAATA GTACAAAGCT TTGCCCATGA TGATGTAAAA ATAGAAAGCA ATAACTTTGG AACAATAAAC CTCAGCGGGG ATAAATCAGC AGGAATATAT AATAAAATGG GAGTAAGTAA AAATGAGGGA ATTATAAATA TTTCAGGAAA TTCAGGAACA GGAATATATG CAGTAACAGG ACAGGCGGAA AATTCCGGTG AAATATTTAT AGGAAATAAA GGAATCGGAA TGTATGCTGA AACTCTTCTG AGCCCAGCAG AAAATCCCAC AAGCAGTTCT TCTGTTTCTA TAAGTAATTC AGGAAAAATA ACTGCTTTAT CAGGAGAAAA AGCAATAGGT ATATTTGTTA ATCAAAATGC ATTAACCGGT ACCACAGGAA CAGCTTCACT GGATCTAACA GGAGGAAATA TAAATGTAAG TGCTTCCGAA AGCGGAGTCG GTGTATATTC AAACGAAGCA GAAATTTCAG GAACTAATTC GGCAATTACT GTCGGGGAGA ATGGCACAGG AGTATATTTA AAAAATGCAG CAGCAAATCT GTACAATCTT GAATTAAATC TGTACGGAGA TAATTCTGTC GGGGTTTATA CAGACGGAAC AGCATCATTT AACGGTTCAG GAACTGTAAA CGTGGACGGA AAAGGAATTA CAGTATTTAA TATAGCAGGT TCAGGAGGAA TCAACCAGAA TTTTACAGTT AATTCCACGG CAGGATCACA ATATACAGTA CAAAATATAA AAGATACTGT CTTTTATTAT AATTCTGCGG CAGATATGGG AGAAGGCGGA AATTTCCTTA CAGGTACTAA TTCTGCGGTA CTTTTGGACA CTGATTCCTC TTTGAGCTCA TCAGCAGATA ATATGACCGG AATAGCTCTG AAAGGCAGCT ATGCAGGCGG ACTTCCGGTA ACCATTAACG GAGAAACTCA GTATTACGAC GTAGTAAACA AAGGACAGAT CAGTTTCAAA AATAATTCTG TGGGTATTTA TACAGCAGGC GGAGCCGGAA TAAAAAATGA CGGCAGTATT TCCATGGGTG ATTATTCTGC GGCTCTATAC GGGAATGGTG CAGGAACAAG AATCCTTAAT AACGGAACAT TAGAAATAGG AAAATATTCC GTAGGGATAT ATAACAATGA CGGATCAGAA ATTATCAATG ACGGAAACAT AATCAGTTCT TCTGACGGTG TAACAGCTCT TTACATAGAC GGAAGCAGCA ATACTGCCGG AGCTAACAGC AAGACAATAA AGCTTACGGG TGAAAAATCC GTAGGGGTAT ATATCTCTGA AAACGGCAGC AAGACATTTG AAAATACAGG AACAATAGAA ACGGGAGATT CAAATTCAGC AACTCCAAAT ATAGGAATAT ATAATAACAA CAACAATGCC GTAATCACTA ATTCAGGTAA TATCACTGCC GGAAAAGGCG GTGTGGGAAT TTATAACAGC GGCGGATATA TAAACTATAT TTCAGGAATA ATGAATACAG GTGAGAGCGG CGTGGGTATA TACAGTGACT CCGGGACTAT GAATATAAAA AACGGAATAA TAAATGTAAA CGGAAAAAAT ACAGTAGGCT TGTACGGGAT TAACGGATCG GCAATTGATA ATAACTCTGA GATAAATGTA GACAGTGAAT CTTACGGTAT AGTTCTTGAA GGAACCTCAA GCCTTATAAA TAGAAATAGT TCTACTGTGG GAGATATGGG AGTTTTTCTT TACTCTGACG GAAATACCTC TGTTACAAAT GAAGCAGGTG CGGCTGTAAC AATGAACGGC TCGGAATCAA TAGGCTTCTA TATGGAAAAC GGAGGAACCG TAACTAACAA TGCAGACATA ACAGCAAATT CAGGAACAGC AAATATAGGA ATATATAATG AGTCTGGAAG CCTATATAAT ACAGGGAATA TAAAAATAGG CGATTCAGTG ATAACAGATC CGGAAAACCC GTTTTCCAAT AAATATGCAG TGGGTGTATA CGGCGAAAAT TTAGCAAATA TGGTAAATAC CGGGAATATA GAAATAGGAG AAAGCAGTGT TGGTTTTTAT TCGACTGGGA ACATAAATGA AGCAGTAAAT ACAGGAAATA TTTCATCATC TTCAAGCAGT GCAATAGGAA TATATATAGA GCAGGGAGCA GTCAGAAACA GCGGAAATAT AACACTGCTG GGAAATAACA GTATTGGAAT CGCATCTCCG CGGAACGGTC AGGTAACTAA TGCTGGTATT ATAACAATGA ACGGCGATAA TAGCATAGGA ATTTATGCTA ATGCTAATTC TACAGTAATA AACGAAAGTA CGGGAAAAAT ATATATAAAC GGAAATAACA GTACAGGTGT ACAGCTTTCA GACGGATCAA CCCTTGAGAA TTACGGAACA ATAATAGTAT CTTCCGGGAC AATAGATTCT ACACAGGTGA TAGAAGGAAA AGCATCTTAT ACTGCACCAA GCATCATAAA TGCCGGTGTA ATAAAAGTAG ATGAAAAATT TGAATTAGAC GGTTATAATC TAATAATAAA ACCTGATCCT TCCAGCTTTA GAAAACCTAC TATGGACGAA GTAACTGCAA ACAGCTATGA ATTATCAGAT GCAAATGCAG GATTCTTACT AAGCAACAGA GTCAGCATAG TAGCGCCAAG CTTTGATTTC GGAAATAATG CGGCTCAGAT AGATCCTTTG TTTACACAGG GAACAAATGC AAGAGTGTAT AAATTTGAAA ATGTATTTGA CCCGAGTACT CCGGGCGGAG GAACTAATAC CGGAGAAGTC TCGGTAAAAA GTAACTCTCT GACATTTGAT GCTGTTCCTG TAACGAATGA CAAAGGAAAA ATAGACATCT GGATGGAAAA AATAAACTAT GATAATTTTA CTGTTGGTGC ATGGTATGAC GGCTTTGCAA AGGAGATAGA AGGTAAATAT CTGAATGCAG AAGGAGATAC TCTAAAAGTA TATGACAAAC TTGATCTGAT AACTGATGAA ACTGTTTTAA GAAACAGTCT TGAACAGCTT GCAGGAGGCA TGTATTCAAA TATTAACCAA AGAGAACAGG ATATTTACGG GATATTGGAT AATGCATTAT ATACATTACA AAATTCAGAT AATAATACAA AAGAAAATGT GAAAATAAAT ATCATTGGAG GAAAAGGAAC TACAAAAGAA AAAACAAGCG GAGTAAATTC ATATGATTAT GATATAACAG GTGTATTGGC TCTAAGAGAA GTAGAAAGAA CATATAAACA TAAATTCGGC TACTCATTGG GTTATACAAG AACTGATTTT CAAATAGACG GAACAGATAA TGAAGATCAG GCAGATACCG TTCAGCTGGG CTTACATAAT AAATACAGTT CAGACGGATG GAACCTTAAA AATGACCTTC TCGGAAGATT AAGCTTTCAT AGCGCGGACA GAAATCTAAC ATGGTATGAC AATACTGTTT CCAGCTTTAA TTCTGATTAT CAGGTATACG GGGTAACATT GCTGAATGAA GCTGAAAAAG AAATAAGCGT TAACCGTAAT ATTAAGCTAA AACCATATAT TGGTCTGGAG CTGGGTTATA TGACTCACGG AAGCTTTGAC GAAAACGGCA GCGGCGAAAA ACTCAGTGTA GACAGCAATG ACGGATACAG TGTAAAACCT AACTTAGGAA TAAGAGTAGA GGGAAGCAGA GAATTCGGAG CTGCTTCAGA ATGGAAATTA AAAGGAAATC TGGGAATAGG CTATGGATAT GAGCTAGGAG AAATGAATAA TCAGGAACGT GCAAAAGTAA ACTTACTGGA AAATAATTAT CATAATCTGG CAAAACCATC AGATGACAAA GGTGAAATGA AGGTACAGGG AAGCGTGGGA ATAGATCTCA TGGAAAGATA TGGTCTGTAT ATAACCGGCG AATATGGAAT CGGTGATAAA GAAAAAGAAG AATATAATAT AGGAATAGGT TTTAAAATGA CATTTTAA
|
Protein sequence | MKTSKKMLAL LALNTLAAVS GKAAETKTDR LYKNITKNIQ TGKSNSANYK LIESILKEKN KELKDLYLQS DYIIKPEYLE WQVFTSGVYS YKDRGGEKDT VTNKINSEVK SVNLGMVIPV TGMTKSPLSL NITSVDEPDI KVTTQSVTAP QVTGQTVNFS GIEIPSAPNL ILVADVNANE LSIESIGSNA SNVAYYTSGG MIFENLNVNT NNTSLTLDTS TRNIDISGEM SYVNGLYSGV SQSSYTHTGY TDNFAVHNIG LSGNFEIKGN WDMTVNDTGS LWRPVGFINY RPYSITGDSK TTFSGDLNLG ITSDYDTSDT PLVGMSLNLS SPVSDNHKAV LENTGTITLK DNPTVETIIG MQLDKSSAAY IRNGELINSG HIIVESSTED PSYPGTYWGG DIGTAGMLVS ALPSSSSVLV KPGNITLKGA GANALEIAGD SYNTNVKIDG TGGQLVIEGV RNTALFLGGD LSSSGTSSLE NVSNLNIFLN GDTTFALIYG QSSSSNVYLP VILNDSIINT MEFGENSNQS AIIYNSGVGS TDLILESSLA NALGQINSGT LNAIAITNSG TLKNYMPINI GSGAIAMKGI VSSNSSTENY ADIVNYSTDG IYKRYTYTSD DEGNPITEIE EIPVGGIGLA APYYDTYYNS YISNRGNIEM GGNYSTAVYN FDDNFVSESD HITANGNMAT AIYAGSNSLN QISNTNIKAD KLMVKGENGT VLNSNSAHIN IGSFTSGQAM ELTADGNNTF AFYFKEYVDM WGNAIPYLGK VTLTSNVNAN LKNGAVGFYY KGDGTANTAD FYSFLDTVVD TSGNNLTVNV DSDSYKIAID NAKVNLSGLL NSANTSGINF TGTDRSKIYR SKVIIDIDSN LDKNNSVGDK SYSNMEIGNS GIDISSGITV SGTEEGLGGI VQSFAHDDVK IESNNFGTIN LSGDKSAGIY NKMGVSKNEG IINISGNSGT GIYAVTGQAE NSGEIFIGNK GIGMYAETLL SPAENPTSSS SVSISNSGKI TALSGEKAIG IFVNQNALTG TTGTASLDLT GGNINVSASE SGVGVYSNEA EISGTNSAIT VGENGTGVYL KNAAANLYNL ELNLYGDNSV GVYTDGTASF NGSGTVNVDG KGITVFNIAG SGGINQNFTV NSTAGSQYTV QNIKDTVFYY NSAADMGEGG NFLTGTNSAV LLDTDSSLSS SADNMTGIAL KGSYAGGLPV TINGETQYYD VVNKGQISFK NNSVGIYTAG GAGIKNDGSI SMGDYSAALY GNGAGTRILN NGTLEIGKYS VGIYNNDGSE IINDGNIISS SDGVTALYID GSSNTAGANS KTIKLTGEKS VGVYISENGS KTFENTGTIE TGDSNSATPN IGIYNNNNNA VITNSGNITA GKGGVGIYNS GGYINYISGI MNTGESGVGI YSDSGTMNIK NGIINVNGKN TVGLYGINGS AIDNNSEINV DSESYGIVLE GTSSLINRNS STVGDMGVFL YSDGNTSVTN EAGAAVTMNG SESIGFYMEN GGTVTNNADI TANSGTANIG IYNESGSLYN TGNIKIGDSV ITDPENPFSN KYAVGVYGEN LANMVNTGNI EIGESSVGFY STGNINEAVN TGNISSSSSS AIGIYIEQGA VRNSGNITLL GNNSIGIASP RNGQVTNAGI ITMNGDNSIG IYANANSTVI NESTGKIYIN GNNSTGVQLS DGSTLENYGT IIVSSGTIDS TQVIEGKASY TAPSIINAGV IKVDEKFELD GYNLIIKPDP SSFRKPTMDE VTANSYELSD ANAGFLLSNR VSIVAPSFDF GNNAAQIDPL FTQGTNARVY KFENVFDPST PGGGTNTGEV SVKSNSLTFD AVPVTNDKGK IDIWMEKINY DNFTVGAWYD GFAKEIEGKY LNAEGDTLKV YDKLDLITDE TVLRNSLEQL AGGMYSNINQ REQDIYGILD NALYTLQNSD NNTKENVKIN IIGGKGTTKE KTSGVNSYDY DITGVLALRE VERTYKHKFG YSLGYTRTDF QIDGTDNEDQ ADTVQLGLHN KYSSDGWNLK NDLLGRLSFH SADRNLTWYD NTVSSFNSDY QVYGVTLLNE AEKEISVNRN IKLKPYIGLE LGYMTHGSFD ENGSGEKLSV DSNDGYSVKP NLGIRVEGSR EFGAASEWKL KGNLGIGYGY ELGEMNNQER AKVNLLENNY HNLAKPSDDK GEMKVQGSVG IDLMERYGLY ITGEYGIGDK EKEEYNIGIG FKMTF
|
| |