Gene Sterm_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4096 
Symbol 
ID8599540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4362523 
End bp4364922 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content35% 
IMG OID 
Productphenylalanyl-tRNA synthetase, beta subunit 
Protein accessionYP_003310859 
Protein GI269122682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCT CGTTAAACTG GTTAAAGCAA TACATAGATT TGGAAGGAAT ATCAATAGAA 
GAATTAGATA ATACCCTTAC TATGATAGGA CAGGAAGTAG AGAAAATAGA AAGACAGGGG
GAATCTCTCG GAAATATAGT AACAGCACAG ATAGTGGAGA AAGAAATGCA CCCTGATTCA
GACCATCTTA CAGTATGTAA GGTAGACGAC GGAAATGAAG TTCTGCAGAT AGTGTGCGGT
GCCTCTAATC ATAAGCAGGG GGATAAGGTA GTGCTTGCAC GTATCGGAGC CGTGCTTGGC
GGAGACTTTA AGATAAAAAA GACAAAAATA AGAGGAATGG AATCTTTCGG GATGCTTTGT
TCGGAAAAAG AGCTGGGACT AAGTGATAAT CATGACGGAA TAATGATTCT TCCGGAAGAT
ACAAAGACAG GAATAGAAAT AAAAGATTAT TTCGGTCTTG ATGATACCAT ATTCGAACTG
GAAATAACGC CGAACAGACC GGACTGTCTG TCACATATAG GAATAGCAAG AGAACTGGCG
GTATACTATA ATAAAGAGCT GCATCTGCCT GAGACAAAAA TGCATGAAAA GCACTTTGAA
AAAACTGAAA ATTTTATACA TATAGAGATA GCAGATGAAA CTATTTCAAA AAGATATACT
TCAAAAATAG TAAAAAACGT AACTGTAAAA GAAAGTCCCG AATGGCTTCA AAAGCGTCTT
AATTCTATAG GAATCAGAAG CATAAACAAT ATAGTGGATG TTACGAATTT TGTTCTTATG
GAAATGGGAC ATCCGATTCA TGCATTTGAC CTTAGTAAAA TCGAAGGAAA AAAAATAATA
GTCAGAAGAG CGGAAGACGG TGAGAAAGTA GTCACTCTGG ATGAAAAAGA GAGAAAACTG
AACCCGGATG ATATAGTAAT AGCAGACGGA AATAAAGCTG TTGCCCTTGG AGGGGTAATG
GGAGGATATA ATTCTGAAAT AGACAGCAAT ACAAAAGATG TATTAATAGA AGTTGCACAT
TTTAATCCTT ATAATATAAG AAAAACTTCA AAGAGACTTA CTCTGTCAAG TGATGCTTCG
TACAGATTCG AGCGTGGAAT AGATTTGGAA GATGCTGTGA GAGTAATAGA CAGAGTAGCC
GAGTTAATAC AGGAAACAGC CGGCGGAGAG ATTCTTCACG GTATATCCGA GGCTTATCCT
GTAAAATATG AGGAAACAAT AGTCGAATTT AATATGAAGA GATTTGAAAA ATTTGTCGGG
AAAGAGATAG AAAAAGAAAG AATAATAGAA ATTTTTGAAA ATCTGGAAAT TACTGTTGAT
GATAAAGGTG AGGTTTTACT GCTGACACCG CCGAGCTTCA GGAATGATCT CGAGAGGGAA
CAGGATTTTT ATGAAGAAAT AATAAGAATT TACGGATTTG ACAATATAGA ATCTGTTATG
CCCAAGTTGG ATATAAATCC GATCCGTATA GATACATTAA GAGAAATAGA CTTGCTGAGA
AGTGCTGCGG TTGCGGTGGG AACAGGTCTG AGAGAGGTAA TAAACTACAG CTTTATTCCC
CGTAATGCAC TGGAAAAAAT AAGATACAAT GATGCAGCCG GTGATGAGAT AATAGAGGTA
AGAAAGCCGA TAACGGAAGA TTTTGTTATT ATGAGACCTA CTTTACTGTA TAGTCTTATA
AAAAATGCAA AGGATAATAT TAACAGAAAT ATAACAGATA TCAGATTTTT TGAAACAACA
AAAACATTTA AAAGAGTAGA AGGAAAAATA GAGGAAGAAC AGAAATTTGG TATTATACTG
GGCGGAGAAC CTGAAAAGTA TATCTGGAAT GTAAAGCCGG TGCCTTATGA TTTTTATGAT
CTGAAAGGAA TAGTAGAGGA AATTTTTTCA AAAATCAGAT TTGAAAAATA TACTTTGGTA
AGAACAACAA AAGAAAGCTA TCATCCGGGA AGAGCAGCAG ATATCTATGT CGGTAAGGAA
TATATAGGAA CATTCGGAGA ACTGCATCCT GATGTAATGG AAAACTTTGA TCTGAAAAAG
AAGCTTCTTA CAGCAGAATT AAGGCTTGAA GCATTAATAA AGTACTCTGA TAAAAATATA
TTCTTCAAGG GAATAAATAA ATTTCCTGCA GTACCGAGAG ATCTTGCACT TGTGATAGAA
GAAAATATTC TTGTGGGAGA TGTTATCAAA AGTATAGCAA AATTATCGCC TGTTATTGAA
AAAGTAGAGC TGTTTGATGT ATACCAGGGA GCAGGAGTAG AAGCAGGGAA AAAAAGTATA
GCAATAAGTA TTGTTTTAAG AGAGAAAAAT AAAACACTGG AAGAAAATGA AATAAATTCA
GTAATATCAA AAATACTGGA AAAAGTAAAG AAAGATTTTG GTGCAGAATT AAGACAATAA
 
Protein sequence
MLISLNWLKQ YIDLEGISIE ELDNTLTMIG QEVEKIERQG ESLGNIVTAQ IVEKEMHPDS 
DHLTVCKVDD GNEVLQIVCG ASNHKQGDKV VLARIGAVLG GDFKIKKTKI RGMESFGMLC
SEKELGLSDN HDGIMILPED TKTGIEIKDY FGLDDTIFEL EITPNRPDCL SHIGIARELA
VYYNKELHLP ETKMHEKHFE KTENFIHIEI ADETISKRYT SKIVKNVTVK ESPEWLQKRL
NSIGIRSINN IVDVTNFVLM EMGHPIHAFD LSKIEGKKII VRRAEDGEKV VTLDEKERKL
NPDDIVIADG NKAVALGGVM GGYNSEIDSN TKDVLIEVAH FNPYNIRKTS KRLTLSSDAS
YRFERGIDLE DAVRVIDRVA ELIQETAGGE ILHGISEAYP VKYEETIVEF NMKRFEKFVG
KEIEKERIIE IFENLEITVD DKGEVLLLTP PSFRNDLERE QDFYEEIIRI YGFDNIESVM
PKLDINPIRI DTLREIDLLR SAAVAVGTGL REVINYSFIP RNALEKIRYN DAAGDEIIEV
RKPITEDFVI MRPTLLYSLI KNAKDNINRN ITDIRFFETT KTFKRVEGKI EEEQKFGIIL
GGEPEKYIWN VKPVPYDFYD LKGIVEEIFS KIRFEKYTLV RTTKESYHPG RAADIYVGKE
YIGTFGELHP DVMENFDLKK KLLTAELRLE ALIKYSDKNI FFKGINKFPA VPRDLALVIE
ENILVGDVIK SIAKLSPVIE KVELFDVYQG AGVEAGKKSI AISIVLREKN KTLEENEINS
VISKILEKVK KDFGAELRQ