Gene Sterm_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4062 
Symbol 
ID8599506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4324217 
End bp4325968 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content40% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003310825 
Protein GI269122648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAG AAAATATAGT TATTGCAGAA AACTTACATA AAAGCTTTTT TTCTAAATCA 
TCAAAAAAGA CAACAGATGC TCTCACAGAT ATTAATATTG AAATTCCAAG GGGAAAGCTT
ACTGCCTTGA TAGGTCCTGA CGGTGCCGGT AAAACAACTT TCATCCGGCT GGTCTGCGGA
CTTATGTTTC CAAGTGACGG AAAGCTCACA GTACTTGGCA TGGAAACTAA AGATAATCCT
CAGGAAATCC AGAATAAAAT AAGCTATATG CCTCAGCGTT TTGGTCTTTA TGAAGATTTG
AGCATACAGG AAAATTTGAA TCTTTATGCT GATCTGCACG GAGTATCGCA GGAGGAGCGC
AAAAAACGTT TCAGCGAGCT TTTAAAAATG ACAGGTTTGG AGCCTTTTAC CGAAAGACAG
GCCGGAAAAC TGTCAGGAGG AATGAAGCAA AAACTGGGAT TAGCCTGTAC TCTTGTCCGT
TCTCCGGAGC TTTTACTGCT GGATGAACCC ACAGTGGGTG TTGATCCTCT TTCAAGAAAA
GAATTATGGG AAATTTTACA AAAACTTGTT AAAGATGAAA AAATCACCAT TCTTGTAAGT
ACTGCTTATA TGGATGAAGC AGAGCTGTGC CAGAAAGTAA TAGTAATGCA TAAAAGCCAG
GTATTAGCTG TAGGAACACC AAAAGAATTA TGTCTGAAAG CTGAAAACAG ATGTTTTATA
GTTCAGCCTC CTGCAGAAAT GCCCTCGCGT ATTTTACAGA CAAAGCTTCT TGATTATAAG
GAAAGCATTA TTGATGCCGT TCCTGAGGGA GGAGAGGTAA GATTTATTGC CCGTTCGGAA
GATGCTGTTA ACAGCATTAA AAATATAACA AATGATCTGC ATATTCAGAA GGTTAATGCC
GGTCTGGAAG ACGGATTCAT GCTTTTACTC CATGAATACG AAGACAATCA TAGAGAGTAT
ACAGAAGAGA TACTTCCTGT AAAATTTCCT GATACTTTCG AAATATCAGA CCAGATTGAC
ATAGAGGTTA ATAACCTTGT CCGTAAATTC GGAGATTTTA CAGCTGTGGC AAACACCTCC
TTTCAGGTAC ATAAAGGAGA AATCTTCGGA CTTCTGGGAC CAAACGGTGC CGGTAAAACA
ACAACTTTCA GAATGCTCTG CGGTCTGCTT CCGGCGACAA GCGGTTTTCT TTCTGTAGCC
GGTGTTAATC TGCGTAAAGC CAGAACTCAG GCCAGAAAAA ATATTGGATA TGTTGCACAA
AAATTTTCCT TATATTCTAC TTTGACTGTA GATGAAAATC TAAAATTTTT CGGCGGAGTC
TACGGCTTGA AAAAAGAAAA ACTAAGAAAA AGAATGGAAG ATGTAAAGGA ACAGTTTGAT
CTGAGAGGAC TGGAAGCGAA GCCGAGCGGC GAGCTTCCCG GAGGATTTAA GCAGCGTTTA
TCAATGGCTG TAGCACTTCT GCATGAACCC AAAATTCTCT TTCTTGATGA ACCTACCAGT
GGTATTGATC CTTTAGCACG GCGTTCTTTC TGGCGCCAAA TAACAGCTCT TGCTGCAGGA
GGTACTACAA TAATTATTAC TACACACTTT ATGGAGGAAG CAGAGTACTG TGATCGTATT
ATGATACAGG ATCAGGGTAA AATGCTGATA TTGGGAACCC CTCAGGAAGT AAGAGAAAAA
GCCGGTAAGG ATATAAAAAC AATGAATCAG GCTTTTATCG AAATAATAGG GGAAAGCCGT
TCACCCCACT AG
 
Protein sequence
MNEENIVIAE NLHKSFFSKS SKKTTDALTD INIEIPRGKL TALIGPDGAG KTTFIRLVCG 
LMFPSDGKLT VLGMETKDNP QEIQNKISYM PQRFGLYEDL SIQENLNLYA DLHGVSQEER
KKRFSELLKM TGLEPFTERQ AGKLSGGMKQ KLGLACTLVR SPELLLLDEP TVGVDPLSRK
ELWEILQKLV KDEKITILVS TAYMDEAELC QKVIVMHKSQ VLAVGTPKEL CLKAENRCFI
VQPPAEMPSR ILQTKLLDYK ESIIDAVPEG GEVRFIARSE DAVNSIKNIT NDLHIQKVNA
GLEDGFMLLL HEYEDNHREY TEEILPVKFP DTFEISDQID IEVNNLVRKF GDFTAVANTS
FQVHKGEIFG LLGPNGAGKT TTFRMLCGLL PATSGFLSVA GVNLRKARTQ ARKNIGYVAQ
KFSLYSTLTV DENLKFFGGV YGLKKEKLRK RMEDVKEQFD LRGLEAKPSG ELPGGFKQRL
SMAVALLHEP KILFLDEPTS GIDPLARRSF WRQITALAAG GTTIIITTHF MEEAEYCDRI
MIQDQGKMLI LGTPQEVREK AGKDIKTMNQ AFIEIIGESR SPH