| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_4039 |
|---|
| Symbol | |
|---|
| ID | 8599483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4297541 |
|---|
| End bp | 4298581 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | glycosyl hydrolase family 88 |
|---|
| Protein accession | YP_003310802 |
|---|
| Protein GI | 269122625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA CAGAGGTCTT GAACAAGCTC TATGAGAGAC TTACAGCTTT GGAAGAGGAT
GAGGGGATAA CACCTGTATA TAGATGGGAA TGGGAGCAGG GGGTAGGCTT ATTTTCAATA
TATAAACTAT ATGAAGCAAC AGGTGATAAA AGATGTCTGG AATTTTTAAA CGGATGGTAC
GAGAAAATGC TTGGAAAGGG CTTTGATAAA AATATAAATA CAATGTCTCC TTTACTGGCA
CTGACTTATT TATACGAGGC AGAAAAGAAT ACTGATTATC TGGAAGTGAT AAAGGAAAAT
GCCGAATGGC TTATGAACAA AATGCCCAGA ACAGTGGAAG GCGGAATGCA GCATCTGACT
ACGCATACTA TAAATAATGA CCAACTGTGG GCAGATACTT TGTTTATGAC AATACTATTC
CTCGCAAGAG CGGGAATGGT TTTGAACAAT CAAAAAATGC AGGATGAGGC TGTATATCAG
ACTATAATCC ATATAAAATA TCTTTCTGAC TGTGAAAGCG GACTGTGGTA TCATGGCTGG
TCACTTACAG AGAGACATTT CGGAGGTATT TTCTGGGGAA GAGGTAATTG CTGGATAACT
ATAGCAATAC CGGAAATATT AACAATAGTG GAAGAAATAA GTATGACTGA TAGGAGGCTG
CTGGAAGAAG CGTATAAAAG ACAGGTCGGA GCGTTGATAA AGTATCAGGA CATATCAGGT
ATGTGGCGTA CAATTATAAA TGACGAGGAT TCTTACTTTG AAACTTCTGC TACAGCAGGG
TTTGCCTATG GGATACTTAC AGGAGTGAAG TACGGGGCGA TTGATAAAAG TCATTATCTG
AATTCATATA TGGCAGTACG TTATATAGTA AGCAACTACC TTGGGGAGGA TGGTTCTTTG
AAGCAGGTTT CCGCCGGAAC GGCAATGGGA TATGACAGCG AACATTATAA GAATATCGGA
TTCTGTCAAA CTCCTTACGG ACAGGGTCTG ATGATTCTGG CAGTTTTAGC TTTGGAAGAT
ACGGAAAAAT TTTATAACTA A
|
|---|
| Protein sequence | MDKTEVLNKL YERLTALEED EGITPVYRWE WEQGVGLFSI YKLYEATGDK RCLEFLNGWY
EKMLGKGFDK NINTMSPLLA LTYLYEAEKN TDYLEVIKEN AEWLMNKMPR TVEGGMQHLT
THTINNDQLW ADTLFMTILF LARAGMVLNN QKMQDEAVYQ TIIHIKYLSD CESGLWYHGW
SLTERHFGGI FWGRGNCWIT IAIPEILTIV EEISMTDRRL LEEAYKRQVG ALIKYQDISG
MWRTIINDED SYFETSATAG FAYGILTGVK YGAIDKSHYL NSYMAVRYIV SNYLGEDGSL
KQVSAGTAMG YDSEHYKNIG FCQTPYGQGL MILAVLALED TEKFYN
|
|---|
| |