Gene Sterm_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4029 
Symbol 
ID8599473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4274492 
End bp4276267 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content36% 
IMG OID 
ProductPolypeptide-transport-associated domain protein ShlB-type 
Protein accessionYP_003310792 
Protein GI269122615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000138882 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGA AAATAATAGC AGTTTTTTTA TTGGGGAATA TTGTATTTTC AGCAGGAGTG 
GGAGATATAA TAGAAAGAAA CAATGCTGCA ATAGAAAATG AAAGAAGACA GCAGGAGCTG
GAGAGAAGGC AAAAGGAACT GGAAAGAGAG AACTTCGGGA AAGAGCCTCA GATAATAGAC
GGTACTGATG AGATTGATAC AAGTGTAAGG TTCTTTATCA GAAAGATAGA AGTACAGGAC
GAATATAATC TTCTAAGTAA AGTAGAAATA AAAGTCGTAA CAAGAAAATA TATTAACAGA
AAGCTGAGCT CCAAGGATAT AAATAAGCTT ATGACAGATC TTAATAATAA ATATATAGAA
AAGGGATATA TAACAACAAG GGTAAGGCTT GACGAAACAC AAAACCTAAG TGAGGGAACA
ATAAGACTGA TAACAATACC CGGAACAGTG GAAGGAGCAA GTCTTAATGA AAATACCTTC
TCTGACAGGA TGAAGGTATT TATGTCAGTT CCAAAGAATA AGAAGAGAAT ATTAAGATTA
CAGGATACAG AACAAGCTAC AGATCAGTTT AACAGGGTAT CAAGTAATAA TGTAGAGATA
AAAATAGCAC CTGGACAGGA AGCAGGAGGC TCTATACTAC AAATAGAAAA CCAGCAGACC
AGGACATTTA ATGCAAATAT CTCATATAAT AACTATGGAG ATGAATCAAC AGGAAGAGAC
AGAGCAAAGA TAGATATTAC GAAGGATAAT CTTTTGGGAA TAAATGACAG TTTTTATGCC
TCATATCAGA GAGGGAGGAA TAAAAGACCT CTGAGAAATG ATTATACAGG CTCGTCATCA
ATACCGCCGG GAACGATAAT CAAGGATAAG GATGATCTTC TTCCTGCAGA TACAGAAGCG
GAACCGGAAA AGTTCAATGA GGACTGGTCA TTGAATTATT CATTTCCGTT CAGATACTGG
ACATTCAGTA CAGGCTACAG TCATTCGTAC TATATAAGCA GCAGTGAAGG ATATAACGGA
CTGTATGATA CAAGCGGGAG ATCAACCCAG TTTAATCTGA ATGCAGACAA AGTGGTATAT
AGGAATAAAA TGAGTAAGAT AAGTATAAAC GGAGGACTAA AGCTAAAGAC AAACCAGAAT
TACTTTGAAG ATGTCCAGCT TGTGGACAGG AGACTGACAA TAGGAAGTCT TGGAATAAAT
TACAGCAGAG GTTTCTTTGG AGGAATACTG GGATTTGATG TTTCATATGA CAGAGGACTT
CCATGGTTCA GATCAGCGGA TGATCATGAG AAGGAGATAT ATGATTCAAA GGGAAGATTT
GACAAGTATG GAGTTAATAT AAACTGGTAT AAACCGATGA CAATAGGAAA GCAAAGATTT
ACCTATAGAC TGGTAGGAGT GGGTCAGTAT ACACAGGATG TGCTTTATGG AAGTGAAAAG
ATAAGTATGG GAGATGAATA TACAATAAGA GGATATAAAG GAGATTCCAT ATCAGGAGAT
AAAGGATATT ATGTAAAAAA TGAGCTGTCA TATAACTTAA ATATATCCAA GATAGGGAGT
ATATCGCCAT ATATAGGCTA TGATTTTGGA GAGAGCTGGA ATAATGAGGT ACATGATGTG
TACAGATATG GATATATGAG AGGATTTGCA GTAGGAGTAA AGTATTACGG AGAAATATTT
AATTTTGATA TAGCATATAC GAAACCTGAT AAGGCATCAG GTTATGTAAG TAAGCCAGAG
GATGAGGTAT ATGTGACATT TGGAATAAAA TTTTAA
 
Protein sequence
MKRKIIAVFL LGNIVFSAGV GDIIERNNAA IENERRQQEL ERRQKELERE NFGKEPQIID 
GTDEIDTSVR FFIRKIEVQD EYNLLSKVEI KVVTRKYINR KLSSKDINKL MTDLNNKYIE
KGYITTRVRL DETQNLSEGT IRLITIPGTV EGASLNENTF SDRMKVFMSV PKNKKRILRL
QDTEQATDQF NRVSSNNVEI KIAPGQEAGG SILQIENQQT RTFNANISYN NYGDESTGRD
RAKIDITKDN LLGINDSFYA SYQRGRNKRP LRNDYTGSSS IPPGTIIKDK DDLLPADTEA
EPEKFNEDWS LNYSFPFRYW TFSTGYSHSY YISSSEGYNG LYDTSGRSTQ FNLNADKVVY
RNKMSKISIN GGLKLKTNQN YFEDVQLVDR RLTIGSLGIN YSRGFFGGIL GFDVSYDRGL
PWFRSADDHE KEIYDSKGRF DKYGVNINWY KPMTIGKQRF TYRLVGVGQY TQDVLYGSEK
ISMGDEYTIR GYKGDSISGD KGYYVKNELS YNLNISKIGS ISPYIGYDFG ESWNNEVHDV
YRYGYMRGFA VGVKYYGEIF NFDIAYTKPD KASGYVSKPE DEVYVTFGIK F