| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3954 |
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| Symbol | |
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| ID | 8599398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | - |
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| Start bp | 4195961 |
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| End bp | 4200007 |
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| Gene Length | 4047 bp |
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| Protein Length | 1348 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003310717 |
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| Protein GI | 269122540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA AAAAAATAAT GTTTTTAATG GCTTTAATTT CGGTTATATC AAATGCAGAA
ATAACTGTTA ATAGTTCACA AGATACTAGA AATATAAGTA AACGTATAAA TTCTATAGAT
GATATGACTG TAAATGGAGA CGGTGCATAT AAAAACGGTG GGGATCCAAA GGATATGGAC
TATACGAAAT TCTTAAACGG GTATAGTGTT GATGGAGACG GGTTTGTTAG TATTGATGAC
GATGTGCTTA TATTTGAAAA TAATCATGTT ATAGATCTTA ACGGTGAGTA TAACAGCGGT
ATTATGGTCA AAAATAACGG CTCAGCGGGA AATTCAGGAA TTATTAATAT TTACGGAAAA
GGCGGAATAG GTCTTTTCAC GGGAGACGGT ACAGGAACTT TGGTAAACAG ACAGACTGGT
ATCATAAATG TTTCAAATTC CGGAATAGGA ATAGCCTCTG CAGGGTGGCC GTATAATAAT
TTTATCGGAA GTATACGGAA TGACGGTACT ATAACGATAG ACGGTGCCGG AACAGGAATA
AGAATCAGCG GGGCTATAGA TAGAGACGGC GGAACAGCAG AAAATAACGG TAAAATAGAG
TTGAACGGCG GCGGAGACAG TATTGGTGTT TATGTCGGAG AATATAATAC ATTTATAAAT
AATGGTGAAA TTTCCGGAAC AACAATCGGA ACAGAAAAAA CTACACTGAT TTCAGCGGTT
AATCAGGGAC AAATTATCAA TTCTGCCGAT GGAATATTGA GAGGTATGAA TAATGCTGTT
GGAATAGAAG TTTCAAATGC ATATAACTCT AATAAAAGTA AGGTAATAAA TGATGGTTAT
ATACTGACTG AAAACGGGGA CGGGATTTTT GTTATCGGAG CTGATGTAGT AAATAACGGT
ATAATAAGTT CCGGAACTGT GGGAATCAGG TCAACAAAAT ATAGTGGAGA GGTTCCTGCA
TCTATCGTTT TAAATAATGG AATAATACAA GTACAGGAAA ATGGTACTGG TATATATGGT
GTTGCATCAA CAGTGGAAAA TAACGGAATT ATAGAAATTA ACGGAAATAA CACTACAGGA
ATTCGAATAA GAGGCTATCT TGATGAAGCA AATGCAACTC TCATAAATAA TGCCGATATT
ACTGCAGATC AGAATAAACA AAATGTAATT TTGTTAAAAG CTGTAGGGAG TGGAGTGACA
GGAGAAGGAA ATGCCGATTT ATATAATAAT GCAAATCTTA CTGCCGAAGG AGAAGACTCT
GTTGCAATCT ATTCACAGAA TGCAGCAAAT GTACATAACA GAGGTAATAT AACAGTAAAT
AACGGGACAG GAATTATGCT GCAAAATTCA TCTTTAAATG AAGGCGACAA TATCGGAACA
ATCACAGTAA GAGGTTTCGG AACAGGAATT TCAGCAGATT CAGTAAATTC AAATATAGTA
AATAACGGAA CGATAAATCT GGAAGGTAAC GGAACTGGGA TATATATAAC TTCCGGAAAT
ATCGGTGAAA ATAAAAATAG TATAAACTTA AACGGTGCAG GCGGAACGGG TGTGCATATA
TACAGAGCAG GTACCGCATT CGTGAATTTT GGTTCTGTAG TTTCATCCGG AGGACCTGAT
AATACAGGGA TAAGATCAGA AGAAGGAAAT CTCCAGAATC TGGGAGATAT AACAATATAT
AATGGAACTG GAATAGAAAG TACAGGCTCT TATACGATAA ATGCAGGAAC TATTAATAAT
AAGGGACCGG AAAGCAAGGG AATTTCTTCT TACAGTTCAA GAATAGATAA TACCGGAAGA
ATAGCAGGAG ACGGAACCGG AATAGATATG AAGGATAACA GTATATTATT AAATGACGGA
GTGATAGAAG CATTCGGAAC CGGGACAGGT GTAATTTCGA CAGGATCTTT TATTCTTAAT
TCAAAAGGCG GGATAATAAG TTCAGAATAT AATTCAGGAA TATCTGCTTT TGACAGCTCT
GTTGAGAATT ACGGGATTAT AAAAAGTATG GACAGCAGCG GGATCATTTC TAATTTTTCA
AGTGTTATAA ATAAAGAGCT TATAAATAGT GTAAATGGAA CCGGAATAGA ATCTTCAAAT
TCTTATGTCC TTAATGAAGG CACTGTAATA TCTGGGAATA AAGGAATATA TGCTGATAAT
AACACCGGAA CAATAAATAC CGGCGTGATA AATTCGGCAG CCGGTGTCGA AATAACAGCA
GGAAGTAATG AATACAGCGG ACATTTTTTG AATACGGGTG AAATAAATGG TTTGGACTAT
GCAATAAAAT TCAATAACGG TGATAATGTG CTGGAATTAA ATAACGGAAG TAAGATCAGC
GGTAAAATAC AGGGATCTGA AGGAGATAAC ACAGTAATTG TAAGTGGAAA TGTGGAGCTG
GATGAATTAA CTGATTTTAG CAAACTCGTG GTAATGGGAG ATACGGCATT AAATGGAAAT
ATATATTTAA AACCGACAAA TAATGAGAAC TATTATACAG CAGCATTCAG CAGCTCAAAA
GATCTTACGG ATATTTCCAA TGAGGCTTCT TTGGGAAACC TTGTATTAAC CGGAACAATA
AATGTAGGTG TGGACTATGA CGGAATAACT GATGAAACTT CAAAAACAGG TAAAATAATA
GCAGACAGTA TAAATGTACA AAATGGAGAT TTAGTATTAA GCAACGGAGG TAAAACAGCT
AAAAGTATAA CAGAGGAATC GGGACTTACA AATACCGGAG ATCAGATAAG GGTAAAAAGT
ATAGTTATAT CAAGCAAACA GCAGGCAGTA GATCCGGAAT TTCAGTTTAG CACTTCAGAA
GATATGAAAG CAGGAGAAGA CTGGATAAGC GAAACAGTTT CAAGAATAGA AAATGGTGTA
ACTGTACTGG ATGAATTATA TACTAATGTA AAAGTACCTG TTCCGCCAGT GGAACCGGAT
TTGAATCCGA TTGATGAAAA TACGGATACA GACAGCAGCG GAGGCGGAAG TCCGGCAGAA
CCTGCAGAAG ATAACGGAAA GGCAATTCCT TCGGATAATG AAAATACATC GGGAGACTCT
GAAATTGTCG TAGATCCGAT ATATCCGGCA GAAAAAAATA CAAATTCTGA TGATTCAAAA
AAACCGGCTG CAGCTGTAAA AATTAATTAT GTTCCTAGAA ACAGAGCAGA TTTGGATAAT
ATGAATAAAA TAACTTCAAT ATCAGAAAAA ATTCTTGATA CAGAAGTGGA TTTTATGAAG
CCGAGAGAAA CAATAACATC GCTTGAATAT ATAGGAACTA AAGGAAATAC GGATTTTAAC
CAGAACAGTA TGCATAATTA TAATTATGAT ACAGATGCTG ACGGGATCAG CGGAAGTATC
GTACATAAAT TAAATGATAA TATATCTGCG GGAATTACCA TTGGTTATAT TGATAATGAC
GTAAGATATT CAAATAATGA TACTGAAGAA ATTAATTCTG CCAATATCAA TATATTTGGA
AAATATCAGG CCGGAAATTT TAGTTTTGAT GCACACGCAG GCTATGGACA TAACGGGCAT
AAGCAAAAAA TAGACTGGCT TGGTGCGGGA ATACAGGAAG GCAGATATGA TTCAAATGTA
GTAAAAACCG GAATTTCTTT TGGTTATAAC CAAAAGCTGT ATAATGACAG TATAATTTTG
CGTCCTGATT TTGGGGTAGA ATATACATCG GTTTACGAGG GAACTATAAA AACAGAAAAT
ATGTCTGATA TAAGCTCTGT TAAAGGAGAC GGATTATCAG GAAAAATAGG CTTGAATCTT
ATGAATACGA CAGGAAAATT AAGATGGAAT GCAGGCATAG GATATGAGAG AAGCTTTACC
GATACTTATC ATAAAGAAAG AAATATGGTA AATAATTACA AAATGGCAAA ATTGGATTAC
GGTCAAGACA ATTGGAGCGC CAATATAGAT CTGAATTACG GATTGACTGA TAAAATTATT
ATCAAATCAG GTTATGAATA TGAAAATAAT GAAAATTATG AGAATCATAA TTTTAAAGCA
GGAATTTCAT ATATATTGGA TAAATAA
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| Protein sequence | MKMKKIMFLM ALISVISNAE ITVNSSQDTR NISKRINSID DMTVNGDGAY KNGGDPKDMD
YTKFLNGYSV DGDGFVSIDD DVLIFENNHV IDLNGEYNSG IMVKNNGSAG NSGIINIYGK
GGIGLFTGDG TGTLVNRQTG IINVSNSGIG IASAGWPYNN FIGSIRNDGT ITIDGAGTGI
RISGAIDRDG GTAENNGKIE LNGGGDSIGV YVGEYNTFIN NGEISGTTIG TEKTTLISAV
NQGQIINSAD GILRGMNNAV GIEVSNAYNS NKSKVINDGY ILTENGDGIF VIGADVVNNG
IISSGTVGIR STKYSGEVPA SIVLNNGIIQ VQENGTGIYG VASTVENNGI IEINGNNTTG
IRIRGYLDEA NATLINNADI TADQNKQNVI LLKAVGSGVT GEGNADLYNN ANLTAEGEDS
VAIYSQNAAN VHNRGNITVN NGTGIMLQNS SLNEGDNIGT ITVRGFGTGI SADSVNSNIV
NNGTINLEGN GTGIYITSGN IGENKNSINL NGAGGTGVHI YRAGTAFVNF GSVVSSGGPD
NTGIRSEEGN LQNLGDITIY NGTGIESTGS YTINAGTINN KGPESKGISS YSSRIDNTGR
IAGDGTGIDM KDNSILLNDG VIEAFGTGTG VISTGSFILN SKGGIISSEY NSGISAFDSS
VENYGIIKSM DSSGIISNFS SVINKELINS VNGTGIESSN SYVLNEGTVI SGNKGIYADN
NTGTINTGVI NSAAGVEITA GSNEYSGHFL NTGEINGLDY AIKFNNGDNV LELNNGSKIS
GKIQGSEGDN TVIVSGNVEL DELTDFSKLV VMGDTALNGN IYLKPTNNEN YYTAAFSSSK
DLTDISNEAS LGNLVLTGTI NVGVDYDGIT DETSKTGKII ADSINVQNGD LVLSNGGKTA
KSITEESGLT NTGDQIRVKS IVISSKQQAV DPEFQFSTSE DMKAGEDWIS ETVSRIENGV
TVLDELYTNV KVPVPPVEPD LNPIDENTDT DSSGGGSPAE PAEDNGKAIP SDNENTSGDS
EIVVDPIYPA EKNTNSDDSK KPAAAVKINY VPRNRADLDN MNKITSISEK ILDTEVDFMK
PRETITSLEY IGTKGNTDFN QNSMHNYNYD TDADGISGSI VHKLNDNISA GITIGYIDND
VRYSNNDTEE INSANINIFG KYQAGNFSFD AHAGYGHNGH KQKIDWLGAG IQEGRYDSNV
VKTGISFGYN QKLYNDSIIL RPDFGVEYTS VYEGTIKTEN MSDISSVKGD GLSGKIGLNL
MNTTGKLRWN AGIGYERSFT DTYHKERNMV NNYKMAKLDY GQDNWSANID LNYGLTDKII
IKSGYEYENN ENYENHNFKA GISYILDK
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