Gene Sterm_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3942 
Symbol 
ID8599387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4186915 
End bp4187751 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content35% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_003310706 
Protein GI269122529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000956617 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAT TATTTGTATC AGATTTGGAC GGAACACTAA TCCATGAGCC GAAAACCGGC 
ATTGAACCTA ATGAAAGAAA TGTAAATGCG ATAAGACTCC TACATGAGAA CGATATTGAA
TTTGCAGTAG CAACAGGAAG GTTTGACTAT CATATTCTGG AAATAGAAGG GTATATAGAA
TCACAAAACT ACAGAATAGG TTTGAACGGG GGGACAATAT ACGCAAAAGA CAATACTCTT
ATAAGGGAAA ATGCTTTTAC GTATGAGGAA GCCGAGAAAT TAAAAAACGA TATTGAAAAA
AATTATATGA AAGAACTGAA TTATCTGGTC TTACAGACTG TGGAAGCGAA AAGATATATT
AAATATCCGA ATTTTTGGAA AAAAGCAGTG AATTTTTACG GATATCAGCG CCGATTTAAT
GCAATCAGCT ATTCCGGAGA TCTGATAAAA GAGCTTGCCG GAAGAAATGA AAAAATAATG
AAAGTCCTTA TAGCTACTGA TTCTGAAAAT AAATATATCC TCCAGGAAAA ACTAAGAGAA
AGACATTCTG AGGCCGAGAT TACTATTTCA GGTCCTGTAA GTATTGAAAT AGTACCCAAA
GGCAATACAA AAGGGAATGC CATGAGAGTG GTAATGGAGA AAAAAAAACT GAAAGAAAAC
GAAGTAGCCT TTATAGGAGA TTCTTATAAT GATATTTCCG GCTTTGAAGC ATGCAAATAC
AGCTTTGCCA TGTCTCACGC AGACGATTTT ATAAAAAGCA GGGCGGCATT TGTAGTAGAC
ACTGTAGCAG ATGCAGTGGA TACAGTAATA AAAATAAACA GAGAAAACGG ACTTTAA
 
Protein sequence
MIKLFVSDLD GTLIHEPKTG IEPNERNVNA IRLLHENDIE FAVATGRFDY HILEIEGYIE 
SQNYRIGLNG GTIYAKDNTL IRENAFTYEE AEKLKNDIEK NYMKELNYLV LQTVEAKRYI
KYPNFWKKAV NFYGYQRRFN AISYSGDLIK ELAGRNEKIM KVLIATDSEN KYILQEKLRE
RHSEAEITIS GPVSIEIVPK GNTKGNAMRV VMEKKKLKEN EVAFIGDSYN DISGFEACKY
SFAMSHADDF IKSRAAFVVD TVADAVDTVI KINRENGL