Gene Sterm_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3941 
Symbol 
ID8599386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4186061 
End bp4186891 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content34% 
IMG OID 
ProductCof-like hydrolase 
Protein accessionYP_003310705 
Protein GI269122528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00611746 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TATTTATCTC TGATCTGGAT GGAACATTAA TATATAAGGC AAGAAATCAT 
GTGCGGCCGA ATCAGGCAAA TGAAAAAGCC CTGAATGAAC TGAAAAATAA TAATATCAAA
CTTGCAGTAG CAACAGGACG TCTGGAAAAA TCCATATACG AAGTAGAACG AAATCTAAAA
ATTCCTTTAT ATAAAATAAG TGTAAATGGT GCTGTTGTAT CAGATATAAA TAATAAATTA
ATACATGAGA GCTTTTTGAA AAAGAGTGCA GTACGGGAAA TAATAAAAAA ACTGGAAAAG
AAATATATGA AGGATATTTA TTTTTATGTA CTGGTAACTG ACAAGTCCAA TAATTATTTC
AGACCTGCGG CCTTTGTGAG CAGATTTGTG AATTTCCTGT ATAAAAAAAG GTTTAATACA
AAATATCTGA CCAGAGGACA TTTGAGACTT TTATTATCAG ATAGTGAAAA AGTACTGAAA
ATAAATATTG GAACAGGGAA AGAGAAAAAA TACAGCCTGC TGGAAGAGAT GCAGAAGGAA
TTTTTTGAAA GCGAGATATT TATAACAGGC AGCAGAAGCG TGGAGGTAGG GCCTGAAAAT
AATTCCAAGG GAAGTGCGGT AATAAAGCTT CTTGAATATC TGGATATAAG CCCTGATGAA
GCAGCATACA TAGGTGATTC ATATAATGAT CTGCCCGGCT TTAAAGTGTG TAAATACAGC
TTTGCTATGG CACATGCAGA AGAAAGTATA AAGGAACAGG CAGCTTTTGT GGTAAAAAGC
GTGGCTGAAG CAACAGATAA AGTAATGGAG ATTAACAGAA AAAGTGAATG A
 
Protein sequence
MIKIFISDLD GTLIYKARNH VRPNQANEKA LNELKNNNIK LAVATGRLEK SIYEVERNLK 
IPLYKISVNG AVVSDINNKL IHESFLKKSA VREIIKKLEK KYMKDIYFYV LVTDKSNNYF
RPAAFVSRFV NFLYKKRFNT KYLTRGHLRL LLSDSEKVLK INIGTGKEKK YSLLEEMQKE
FFESEIFITG SRSVEVGPEN NSKGSAVIKL LEYLDISPDE AAYIGDSYND LPGFKVCKYS
FAMAHAEESI KEQAAFVVKS VAEATDKVME INRKSE