Gene Sterm_3940 details

Gene Information

• Locus tag: Sterm_3940
• ID: 8599385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 4183498
• End bp: 4185663
• Gene Length: 2166 bp
• Protein Length: 721 aa
• Translation table: 11
• GC content: 35%
• Product: RNA binding S1 domain protein
• Protein accession: YP_003310704
• Protein GI: 269122527

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATATTT TGAAAGCTGC TGCAAATGAA ATGGGCCTGA AAGTAGTACA GGTAGAAAGC 
ACAATGAATC TTTATGACGA AGGAGCTACT GTACCTTTTA TTGCACGTTA CAGAAAAGAA 
GTTACCGGGA ATCTTGATGA GGAGAAAATC AGAGAACTCA TAGAAAAAGT ATCATACTAC 
AGAAACCTTG AGAAAAGAAA AGAAGAAGTA CTGAGATTAA TCGAGGAACA GGGAAAACTA 
ACCGAGGAAC TGAAAACAAG CATAATAAAT GCAGTGAAGT TACAGGAAGT AGAAGATCTC 
TATCTCCCAT ACAAAAAAAA GAAAAAAACA AAAGCAGACG TAGCTGCAGA AAATGGACTG 
GAGCCCCTGT CTTTATTTTT GATGGATAAA AATGTAAATA TGGAAGCATT GAAAAAAGAG 
GCGGAAAAAT ATATAAATGA ACAGGTTCCG GGAATTGATG AAGCTATTGA GGGAGCAAAG 
CTGATTATAG CGCAGAATAT TTCCGAAAAT GCCAAATACA GAGAATCTAT ACGTGACAGA 
ATCAGCAAAT ACGGAGTGCT GACTTCAAAG GTGATAGAAA AAAACAAAGT AAATGATGTA 
AAAGGTGTCT ATCAGGATTA CTATAAATAT TCCGAACCTT TGACACGGGC AGCTTCACAC 
AGGATTCTTG CCTTAAACAG AGGTGAAAAC GAGAAAATAT TAAAAGTAGA TATAGAAATA 
GATGAAACTA CACATAAATA TATAGTAGAT AATATTTTAA GAGGATTTCA AAATAAAAAT 
CTTACGGAAT TTTTTACAGA GGTTATAGAA GATTCACTCA GCAGACTGGT TTACCCGTCT 
ATAAAAAATG AAGTAAGAAA TATATATACA GAAAAATCAG AAGTAGAAGC AATAGATATA 
TTTAAGGATA ATCTGGAAAA ATTATTATTA CAGCCTCCAC TGTATAAGAA AGCTATAATG 
GGACTGGATC CCGGCTACAG AACAGGGTGT AAGCTTGTAG TCATTAATAA AGACGGCTTC 
TATGAAAAAG ATGATGTAGT GTTTCTTGTG GAGGAGATGC ATTCTCCAAG ACAGGTAAGC 
GAAGCTAAAA AGAAAATATT ACAGTATATA GAAGATTATG ACGTGGATAT AATAGCAATA 
GGAAACGGAA CTGCTTCAAG AGAAACGGAA AGCTTTGTTG CCAAAGTGAT AAAGGAATCT 
AAAAAGAAGG TATTTTATCT TATTGTAAAT GAAGCGGGAG CTTCTGTATA TTCTGCTTCA 
AAGCTTGCAA AAGAGGAATT TCCCGATTTA GATGTAACAG CAAGAGGAGC TGTTTCGATA 
GCAAGAAGAA TTCAGGATCC TATGGCGGAG CTGGTAAAAA TAGATCCGAA GTCAATAGGC 
GTAGGAATGT ACCAGCATGA TGTAAACCAG AAGACACTGA ATGAATCGCT GGAGCAGACA 
ATAGAACATG TAGTTAACAA TGTAGGAGTA AATATAAATA CAGCTTCATG GGCACTGTTA 
AGCTATGTTT CGGGAATCAA AAAAAATGTG GCTAAAAATC TGGTAGATTA CAGACATGAA 
AACGGGGACT TTAAAAAAAG AGCAGAACTA AAGAAAGTAA AAGGTCTCGG AGCCAAAGCC 
TTTGAACAGA TGGCAGGATT TATAGTGATT CCTGACAGTG CGAATCCTTT GGACAATACG 
ATAATTCACC CTGAGTCATA TAAAATAGCT GAAAAAATAC TCGGTGAAGC AGGATGCAGC 
CTGAAAGACC TGAAGGCAGA TATAAAAGGA ACACAGGAAA AACTGGAAAA GTTAAATATC 
GAAAAAATAA TAAAGGAAAA TGAATTCGGT GAGGAAACAG CAAAAGATAT ATACAATGCT 
CTTCTAAAAG GCAGAAGAGA TCCGCGTGAA GAGTTTGAAA AGCCGTTATT AAGATCTGAT 
ATACTGAATA TGAATGATCT TGCCGACGGG ATGATTCTTG AAGGAACTGT CAGAAATGTG 
GCGAAATTCG GTGTATTTGT AGATATAGGA CTAAAAAACG ATGCTTTGAT ACACGTATCG 
GAATTATCGA ATAAATTTAT TTCAGATCCT ACAAAAGTAC TTTCTGTAGG TGAAATAATA 
AAGGTAAAAA TTCTTTCCAT AGATAAAAAC AGGGGAAGAG TAGCATTAAC AAGAAAAGGA 
TTATAG 

 

Protein sequence

MDILKAAANE MGLKVVQVES TMNLYDEGAT VPFIARYRKE VTGNLDEEKI RELIEKVSYY 
RNLEKRKEEV LRLIEEQGKL TEELKTSIIN AVKLQEVEDL YLPYKKKKKT KADVAAENGL 
EPLSLFLMDK NVNMEALKKE AEKYINEQVP GIDEAIEGAK LIIAQNISEN AKYRESIRDR 
ISKYGVLTSK VIEKNKVNDV KGVYQDYYKY SEPLTRAASH RILALNRGEN EKILKVDIEI 
DETTHKYIVD NILRGFQNKN LTEFFTEVIE DSLSRLVYPS IKNEVRNIYT EKSEVEAIDI 
FKDNLEKLLL QPPLYKKAIM GLDPGYRTGC KLVVINKDGF YEKDDVVFLV EEMHSPRQVS 
EAKKKILQYI EDYDVDIIAI GNGTASRETE SFVAKVIKES KKKVFYLIVN EAGASVYSAS 
KLAKEEFPDL DVTARGAVSI ARRIQDPMAE LVKIDPKSIG VGMYQHDVNQ KTLNESLEQT 
IEHVVNNVGV NINTASWALL SYVSGIKKNV AKNLVDYRHE NGDFKKRAEL KKVKGLGAKA 
FEQMAGFIVI PDSANPLDNT IIHPESYKIA EKILGEAGCS LKDLKADIKG TQEKLEKLNI 
EKIIKENEFG EETAKDIYNA LLKGRRDPRE EFEKPLLRSD ILNMNDLADG MILEGTVRNV 
AKFGVFVDIG LKNDALIHVS ELSNKFISDP TKVLSVGEII KVKILSIDKN RGRVALTRKG 
L