Gene Sterm_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3872 
Symbol 
ID8599318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp4117666 
End bp4118388 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID 
ProductGlucosamine-6-phosphate deaminase 
Protein accessionYP_003310637 
Protein GI269122460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA TAACAAAAAA GGACTATGAT GAGCTGTCTA AAGCCGTGGG AGATTTTGTA 
ATTGATTATG TAGGTAAAAA GCCTGACAGT CTGATCTGTT TCGCCGGCGG GGATACCCCT 
CTCGGGCTTT TGAAATATCT GGTGGAAGCT GTAAATGAAA ACAAAGTTGA CCTTAGTAAA 
TGCAGATTTG TAGGTCTTGA TGAATGGGTA GGATTGGGAA GAGATGTAAA GGGAAGCTGT 
CAGGAAATGC TGTATAATAA TTTCTATGAT CTTATTCCTG TTCCAAAAGA ACAGGTATGC 
TTTTTTGACG GACTGGCAAA AGATCTGAAT GAGGAATGCA GAAGAGTAGA TTCTTTTATA 
TCTGATAATG GTAACCTTGA TCTCATTGTT CTTGGTATCG GTATGAACGG GCATATCGGC 
TTTAATGAAC CTAATGTCCC TGCAGATACT TACTGTCACA TTGTAGATCT GGATCCTATT 
ACAAAAGAGG TTTCCGTAAA ATATTTTGAT ACTGCACTTG ATGTAAAGCA GGGATTATCT 
TTGGGAATGA AAACAATACT TGAAGCTGAT ACTATTATTT TAATGGCTGA TTCTGAAAGA 
AAGGCTGATA TTGTTTATAA AACAGTTCAT TCGGAAAAAA CTCCGGAAAT TCCTTCTACT 
ATGGTAAAAG ATGCACAAAA AGTTTATTTC TTTATTGATG AAGCAGCAGG AAAATTACTG 
TAG
 
Protein sequence
MELITKKDYD ELSKAVGDFV IDYVGKKPDS LICFAGGDTP LGLLKYLVEA VNENKVDLSK 
CRFVGLDEWV GLGRDVKGSC QEMLYNNFYD LIPVPKEQVC FFDGLAKDLN EECRRVDSFI 
SDNGNLDLIV LGIGMNGHIG FNEPNVPADT YCHIVDLDPI TKEVSVKYFD TALDVKQGLS 
LGMKTILEAD TIILMADSER KADIVYKTVH SEKTPEIPST MVKDAQKVYF FIDEAAGKLL