| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3857 |
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| Symbol | |
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| ID | 8599686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | - |
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| Start bp | 4099139 |
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| End bp | 4105555 |
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| Gene Length | 6417 bp |
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| Protein Length | 2138 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003310622 |
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| Protein GI | 269122445 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ATGCAGGTAT TATATTATAT ATTATTCTTA TTCAGTTTAC ATGCAGTCAG
AGTATAGCTG ATGCAGATAA AAAAAATTAC GAAAATAAAT ATAAATTAGT GGAACAGCTG
CTGAAGGAAA AACAGAAGGA ACTTGAAGAT CTCTACAAAC AGGGGGATTT TATAGTAAAG
CCTGAGTATC TTTCATATCA GGTGTTTTTT TCTGCATTCT ATGAAAACAG CAAAAGTGGG
AAATCCTCTT ATGGGAAAGA TTTTGAAAAT CCGGCAGTAC CTATACCGGT TAATTTTGGC
ATACTTATAC CCATGAAAGA GATAAAACCT GAAATTCAGG AAATTATACC AAATAATTAT
AATTTTGCTT TTGCAGATCC CGAATCAATA AAGATCGGAT CTCTTGAACT GCTTACGGTG
AAAACCATGG AGATACCCAA TTTTGACGTA GAAATACCAA ATATACAATA TCCTGTATCT
TTTGGAACTA TAGAGCCTAT AACTGTGAAT GTAAGTACCA ATACAAACGG ATATACTAAT
TCAGCGAATA ACCAGAATTT GAACACAAAT ACCCAGACAC CGGCAAATAC TTTTTTGGCA
AACGGAAGCT CACAGACCGG AATTATTCAG ATAATAGGGG TAGAAGGGAC AAATGTTACA
GATCCTTTAG GCGGAACAGG AAGTGTTACA TATGTAATAG CTGCTGATAT GGAAAGTCAG
AGAACAGGCG GAAGAATTAT TACAATGGAG TCTCATAGAG GCTATTCAGG AACTACAGGT
GCTACTTCTG CAACCGGTGA TCTTAATGAA GCATTATTTT TAACAACAAC TGGAAATTTA
TATATTAATT CCGGAAATTC AATAGGGGTA GAACTGGAAA GAGGTTATTC AGACGCTAGG
AATGATGCCC TCTACATAAA TAAGGGGCTG ATAGAGTCAG GAGCAGCATA CGGCAAGGTC
ATAGGGATTG ATTTTCAGGG GGAAACATTA GGATCCGAAG AAGGACCGAT AATAGCCGAG
AACAGAGGAA TAATAAGAAT GAACGGCGAT GACAGTATAG GGATAAATTC TGTGAGAACT
CCTAATGCTA CCGGGACTGA TTTGGATATA GGGATAAAAA ATACAGGTCT GATAGAAATA
AATGGAGATA ACAGCTACGG TATATTTATA GGAGGGAAGG ATCTCAGGGG AAACTGCAAC
AAGGATACCG GCTGCCCTGC CAGACCGGCA AATATTACAT CTGATGTAAT GTACGAAAAT
CTTCTGGTTC AAAACGGGAC TATAAACATT AACGGAGAAA ACGGAGTGGG AGTGGTTTTA
AAAGATACTG ACAGCCTTTA TAATGTAAAG ATATTAAATA ATGCAGTATT AAATGAGGCT
GCCGGAGTAA TAAACATAAA TAACAAAAAT TCTGTGGGAA TATATGCAGA TGGAATATAT
GATAACTCCA ATGTTTTCCA CGGAGAAGAA ACAAACTATT ATAATAACGG GACAATCAGT
CTGAACTCAC TGGACGGGAT AGGAATACGG GTTGATTACA GCGGTGTAGA GAATACCGGA
ACAGTAAGGC TGCTTTCCGG AGCAGTGAAT TCTATAGGAA TGGCGGGAAC CGATCAGACT
ACCATTCCGA AAAACAGCGG ACTTATAGAA ATATTGAACG GCGGAAGTGA AAACATAGGA
ATCTTTGTAA ATGAAGGAAA TGCAGTAAAT CTTGAGAATG GTATAATAAA AGTGGGAGCG
GGTAATTCTT CAGGGATTCT TGCCTATAAC GGAACAGGGG AAAATAAAGG TGGTATTTTT
GTAAGCAGTA ATGATTCTGC CGGAATAATA GCTGATAATT CTACAATTAA TGTAAACGGA
GGGCTTATAG AAAACAACGG TAATAATATG GCAATATTCG GAACAGACAG TTCGGTTATA
AATTTGAATG CAGGACTTAT TAATACACTC GGGCAGGGAG TTTCACTGTA TCTGAATAAA
GGAACAGCCG TAAATCTGAA AAACGGATTC ACAATTAATG TAAATAATGA AAGCTTTATG
CTGTACAGCA AGGATTCTTC CGGATCGTAC TCATCTGTGT TAAATACTGA CGGTATTTCC
GCGGCAAATA TAAAAAACGG CGGATTTGGC TTTTATTATG ATAAAAATAC AGGCACAGAC
GCGGAGAATT TTTTGAGAAA TACAGTGTCA GGTACTGGTA TATTAAATTT AAACATGGAA
AAGGAAGCAG TGCTGATATT TCTTGATGAA ACAACAGTAA GTCCGCAGTA TCTGAGTAAT
TTGGATATTA ATTTATCAAA TATAGGAAAT GCTTTAAAAA TAAACGGTTC TGGTTATTAT
AACTACGGCT TTAATAAAGT GGGTCTTATA GTAGATAAAA ATATAAATCT GGATAATCCT
GATGATACTT ATCTGAAAAA TATATATTCG TCATCTGATA TAGATGTAAA TACAGGAATT
GACATAACAG GAAGCAAAAG CGGGCAGATT TTTATAATAC AGGCTAACTA TGACGGAAGT
CCGGGAAGAA ATGCAGTAAT AATAAATAAT AACGGGAATA TAACACTTTC CGGAAATAAT
TCGGCAGGTA TTCTGGCAGA TTTCGGGGAA ATATATAATA ATGCCGGCGG AGCGGTAAAT
ATTCTCGGAA GTAATTCAAA AGCGCTGGTG TCATTAAACG GGACAGCTGT TTTTAATGAT
GGTGTTATAA ATATCGGCGG TGCAGATTCA GCGGGAATAT ACGGATCAAA TAATTTTGTC
GGAGTATCGG CGGTGTATGG AAATGAAAAA ATAGAAATAC ATAACAGCGG TGTAATACAA
AGTGTAAGCG ATCAGGATAA TATTTACGGG ATATATTCTA TAAATGAAAA GGTACCTGTC
ACTGATGCAA GAGTCACTTT AACAGGAAGT TCCCGCATTT TGCTGAAAAA TTCAGAAAAT
TCTGTGGGAA TATTTTTGGA AAACAGTACA TTGAACGGAA GCGGAATAGT AGAGGTCGGT
AATGAGGGAA TAGGGTTGTA CGGGCATAAT TCCGTTATTA ATCTTAACAG TTTTACAATG
AATCTTTCCG GAAATAATGC ACTGGGTTTT TATTTGCGGG GAAATACAGT ATTTAATGCA
GCAGGCGGAC TTAATACAAT AAATATAAAC GGAACAAATA ATATACTTTA TTATTTTACA
AGTGATTTCA ACGGTTTATT CAATCAGGAT TTCATTGTAA ACTCAACCCC CGGTTCCACA
TATATGCTGG GTGTAATAAA AGACATGTCT TATTTATATA ATGGAACAGC GGATTTGGGA
GAAGGCGGGA TATTCGTCTA CGGGACAGAT TCCTCGGTGA CACTGGGAGT GAACGGACAT
TTGGAATCGC AGTATGACAA TGTGATCGGG ATTTATTTGG ACGGAGTATA TGCAACGGCA
CCTTATGAAG CTTTGAATAC CGGGAGTATA AATCTGGAGG GGAATAATTC GGCAGGAATC
TATCTGGAAG GGGGAGCAAG GGCATTAAAT GATTCAAACG GAGTAATAAG TACTGGAACA
GGTTCTGCAG CAATATACGG CAATTTTGCA GGGAATATTG AGAATTCGGG AGAAATATAT
ATAAAGGATA ATTCTTCGGG AATTTATACC GAAAACAGCG GTTTTACAGA AAATAACAAA
TTGATAAGCG GAAACGGAAA TAAAGAAACA GGGATATATT CGGTAAATTC CGCAGGAGTG
CTAAATTCAT CAAGCGGAGA AATAAGACTT ACAGGAGACG GGAATGTGGG AATATACAAT
ATTTCCAGTA CAAATACGCA AAATGACAAT ATGATTTTCC TTGTGAGCAG CGGAAACAGT
AAAACACCCG GAATAGGAAT ATATTCAGAC GGAAGTATAT CCAATACAGG AAATATAAAT
GTATATGACG GATCAGTCGG AATATATGCA TTTAACGGTA ATTTGGTTCA CAGCGGTATT
ATTTCTTCTG GGGCTGGAGG AATAGGAATA TATGCTGACA ATGAAACTGT TTCATTAAAT
ATATCCTCTG ATATAAAAAT CGGAAATAAT GCAGTCGGAG TGTACGGGAA GAATAATACG
GCAATCACAG CCAACGGAAG TCTGAATATC GGGACAGACA GCTTTGGATA TGTTTTGGAA
TCCGGTACGA AGCTGTATAA CAGCAGTAAT ATGACACTGA GTGACAGAAG TGTCTTTGCA
TATTCGGACA GTGCAGCAGA AATAATTAAT AATACCGGTG CGGATATATT TATGGACGGG
CAGGAGAATA CAGCTTTTTA TATGGTGAAC GGCGGTAAAA TTACAAATAA TGCCGATATT
ACAGGTGTTT TTGGTACATC AAATGTGGGG ATATATAATA ACGGCGGGAG TATAGAAAAT
AACGGCAATA TAAAAACAGG AGATTCTGCT CTGAAATACA ATGCTGACGG TCAGACGGAC
TATAACGGCA GCAGCTACAG TATAGGGATA TATGGTGAAA ATAATATTTC TTTTATAAAT
ACAGGAAAGA TAGAAACAGG GGAAAACGGA GTCGGGATAT ATGTAAAAAG ATATAAAGGA
GCTATTCCGG CAGAGAATAC CGGAAATATA ATTTCGGGTG GAAACGGAGC GATAGGAATA
TTTGCAGAAA ACAGTACAGT ATTGAATAAT GGTGTAATTA CAATGAACGG AAATAATGCA
TCCGGAATGT ATGCCAATAT AAATGCCGTC ATAATAAATA ACGGGATAAT CAATATAAAT
GGCAGTAATT CCGCAGCAAT GACAGCAAGC ACAGCTTCAA GGGCAGTAAA TAACGGGATA
ATAAATTTGA ACGGAAAAAA CGGAATAGGG GGACTTTATT ACGGAAATTC CTCTTTTGAA
AATAACGGAA CAATAAACAT AAATAACACA GGTCTTGAAG AAGATGAAAA AAATATAATT
TCAAAAGAAA GTGATATACC TTTGGCAGTA CCAAGTATTG TAAACTCGGG AGTAATAAAC
GTGAATGAAA ATTTTCTGAA TGAAGGAATG AGAATAGTAA TAAAAGTAAA TCCGGAGACA
ATAAGAGATG CGGTGCTGCC TGAGGATAAC GGCGCAAAAT TTGTCTCAGA TTCAGTAAAA
TTCAAAGCAC CTTACTTTGA CGGCGACAAA AATAATCCGG TATTGATAAC GCCGGATTTT
GCCGTGGGAA CAAATGCATT GGTATATAAG CTGAAAGATG TATTTAACCC GTCTACAAAA
GACGGAGGGC CTAATTACGG TATAGTTCCT ATAGCAAGTG AGTCATTGAC TTGGAGGGCG
GTTCCGGTGA TAAATAATTC CGGAAATCTT GATATATGGA TGGAAAAAAT TGCCTATGCA
CAATTTACCG CAAAGGAATG GTATGCCCCG CTGGGTGGAG TGCTGGATAA AAAATATGAA
TTTTCAACAG GGGAATCGCT AAAAATTTTT GACAGTCTGG ATATTATAAA AACCGAAGAT
AAATTTCAAA AAATTATGGG AAATCTGTCA GGAAACATAT ATGCAAATAT GAATAAAAGA
GAAAAAAATA CGGCTGATAT ATTTCAGGAT TCGCTGGAAT TACTTCAGGG GTCTGAAAAT
AACACAAAAG AAAGTATAAA AATAAACATA ATAGCTGGAA AAACTGAAAA TACAGAGAGA
CAGAAAGGAA TCACGGGATA TGACAGTACA GCTTTCGGCG GAATTATACT GAGGGAAATA
GAAAGAACAT ATTATAATAC TGTGGGATAT TCAGCGGGAT ATCTTCATAC AGCCACTGAT
TATGCCGATT CTGATAACAG TACGGAAGAT ACTGATACAC TGCAGGCAGG GGTACATAGC
AGATATAATG TCTCGCAATG GACATTTGAA AATGATTTTA CAGGAAGAAT AAGTTTTCAT
AATGTCAAAA GAAATATAGA ATGGGAAGAC AGAAAATCAG TGATGAACGG AGAATATCAG
TCATATAGTT TCAGCAGTAT AAACAGGGCA GGTTATAAAA TAAACAAGGC AGTAATGCCG
TATGCAGGCT TTAGGGTAAT GTATGTTACA AGACCGGGAT TCGGAGAAAC AGGGACAGAA
AGACTGCAGA TAGAAGGTAA TGATGCATGG AGCGTAAAGC CCGGAGCAGG AATAGAGCTA
AAGGGCGGAA CTAAACCCGG CAAAAACGGC TGGGTACTAA AAGGGCTGCT TGATATAGCA
TATGAGTATG AACTGGCTGA ACTGAATGAC CGGGAAAGAG CTAAACTCAC AGTTATAGAA
GATAATTATC ATGATCTTGT AAAGCCTGAC AAGGAAAAAG GAGTTTTTAA ATCAAAAATA
ACTGTCGGAG CAGAAACAGG GGACAAATTC GGTATTTTTC TTACAGGTTC ATATGAGGCA
GGGGCAGGTA ATAATGAAAA TTACAGAATA GGAATAAATT TTAAGGCAGC ATTTTGA
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| Protein sequence | MKKYAGIILY IILIQFTCSQ SIADADKKNY ENKYKLVEQL LKEKQKELED LYKQGDFIVK
PEYLSYQVFF SAFYENSKSG KSSYGKDFEN PAVPIPVNFG ILIPMKEIKP EIQEIIPNNY
NFAFADPESI KIGSLELLTV KTMEIPNFDV EIPNIQYPVS FGTIEPITVN VSTNTNGYTN
SANNQNLNTN TQTPANTFLA NGSSQTGIIQ IIGVEGTNVT DPLGGTGSVT YVIAADMESQ
RTGGRIITME SHRGYSGTTG ATSATGDLNE ALFLTTTGNL YINSGNSIGV ELERGYSDAR
NDALYINKGL IESGAAYGKV IGIDFQGETL GSEEGPIIAE NRGIIRMNGD DSIGINSVRT
PNATGTDLDI GIKNTGLIEI NGDNSYGIFI GGKDLRGNCN KDTGCPARPA NITSDVMYEN
LLVQNGTINI NGENGVGVVL KDTDSLYNVK ILNNAVLNEA AGVININNKN SVGIYADGIY
DNSNVFHGEE TNYYNNGTIS LNSLDGIGIR VDYSGVENTG TVRLLSGAVN SIGMAGTDQT
TIPKNSGLIE ILNGGSENIG IFVNEGNAVN LENGIIKVGA GNSSGILAYN GTGENKGGIF
VSSNDSAGII ADNSTINVNG GLIENNGNNM AIFGTDSSVI NLNAGLINTL GQGVSLYLNK
GTAVNLKNGF TINVNNESFM LYSKDSSGSY SSVLNTDGIS AANIKNGGFG FYYDKNTGTD
AENFLRNTVS GTGILNLNME KEAVLIFLDE TTVSPQYLSN LDINLSNIGN ALKINGSGYY
NYGFNKVGLI VDKNINLDNP DDTYLKNIYS SSDIDVNTGI DITGSKSGQI FIIQANYDGS
PGRNAVIINN NGNITLSGNN SAGILADFGE IYNNAGGAVN ILGSNSKALV SLNGTAVFND
GVINIGGADS AGIYGSNNFV GVSAVYGNEK IEIHNSGVIQ SVSDQDNIYG IYSINEKVPV
TDARVTLTGS SRILLKNSEN SVGIFLENST LNGSGIVEVG NEGIGLYGHN SVINLNSFTM
NLSGNNALGF YLRGNTVFNA AGGLNTININ GTNNILYYFT SDFNGLFNQD FIVNSTPGST
YMLGVIKDMS YLYNGTADLG EGGIFVYGTD SSVTLGVNGH LESQYDNVIG IYLDGVYATA
PYEALNTGSI NLEGNNSAGI YLEGGARALN DSNGVISTGT GSAAIYGNFA GNIENSGEIY
IKDNSSGIYT ENSGFTENNK LISGNGNKET GIYSVNSAGV LNSSSGEIRL TGDGNVGIYN
ISSTNTQNDN MIFLVSSGNS KTPGIGIYSD GSISNTGNIN VYDGSVGIYA FNGNLVHSGI
ISSGAGGIGI YADNETVSLN ISSDIKIGNN AVGVYGKNNT AITANGSLNI GTDSFGYVLE
SGTKLYNSSN MTLSDRSVFA YSDSAAEIIN NTGADIFMDG QENTAFYMVN GGKITNNADI
TGVFGTSNVG IYNNGGSIEN NGNIKTGDSA LKYNADGQTD YNGSSYSIGI YGENNISFIN
TGKIETGENG VGIYVKRYKG AIPAENTGNI ISGGNGAIGI FAENSTVLNN GVITMNGNNA
SGMYANINAV IINNGIININ GSNSAAMTAS TASRAVNNGI INLNGKNGIG GLYYGNSSFE
NNGTININNT GLEEDEKNII SKESDIPLAV PSIVNSGVIN VNENFLNEGM RIVIKVNPET
IRDAVLPEDN GAKFVSDSVK FKAPYFDGDK NNPVLITPDF AVGTNALVYK LKDVFNPSTK
DGGPNYGIVP IASESLTWRA VPVINNSGNL DIWMEKIAYA QFTAKEWYAP LGGVLDKKYE
FSTGESLKIF DSLDIIKTED KFQKIMGNLS GNIYANMNKR EKNTADIFQD SLELLQGSEN
NTKESIKINI IAGKTENTER QKGITGYDST AFGGIILREI ERTYYNTVGY SAGYLHTATD
YADSDNSTED TDTLQAGVHS RYNVSQWTFE NDFTGRISFH NVKRNIEWED RKSVMNGEYQ
SYSFSSINRA GYKINKAVMP YAGFRVMYVT RPGFGETGTE RLQIEGNDAW SVKPGAGIEL
KGGTKPGKNG WVLKGLLDIA YEYELAELND RERAKLTVIE DNYHDLVKPD KEKGVFKSKI
TVGAETGDKF GIFLTGSYEA GAGNNENYRI GINFKAAF
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