Gene Sterm_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3841 
Symbol 
ID8599287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4075860 
End bp4076711 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content31% 
IMG OID 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003310606 
Protein GI269122429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.412935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGA TTATCAAATT AAGAGAAGCT AAGAATTTTA CGCCCAATGA AATAGGGGCG 
GCAAAATATA TAATTTCACA TTCTGATGAA GTAATAAGGC TTTCCTGTAC TGAACTGGCA
AAGAAAACAT ATACGAGTCC AGCTACGATA ATCAGATTAT GTAAAAAGAT AGGGATCGGC
GGATATCAGG AATTCAAGGT AATATTAGCC ACAGAAATAA ATTTTTTCAT AAAAAACAGT
ATGGAAATAA ATAAAAATAA TGAAATAGAC AAAAAAGACT CTATAAGTGA TATTATAGAT
AAAATCAGCT CTTTGAGTAT AGATTCCCTG AAAGAAACTA AAATTCTCAC AGATAAAAAT
GTGGTAAAAT CAGTGATAGA TATGATTAAT AATGCTGAAA TTCTGGATTT GTACGGTTCA
GGGGCATCAC ATTTCGTAGC CTTGGATGCA AATTACAAAT TTATGAGAAT AGGAAAAGTA
ACAGCAACAT ATGCACTTTA TGACCAGCAG TATGTACAGG CAAAAAATTC CAATGAAAAC
CATGCTGCTA TTATATTTTC CTATTCCGGT GAAACTGCTG AAATGATAGA AATAGCAAAA
ATTCTTACTG AAAATAAAGC TAAAATTATA ACAATCACTA AAAATTCAGA TAATACCCTT
GAAAAATTTG CTGATAAGTC GCTTTATGTA ACCGCAAAAG AAAATTTATA CAGAAGTGCT
GCTATATATT CAAGAATATC CATGCTGAAT GTTATTGATA TATTGTATAC AGCATATTTT
AACCTGATTT ATGAAAAAGC ACTGGAAGCA TTGGGAAAAA CAAGGATATC TAAAACGGAA
GTAAAATTAT AA
 
Protein sequence
MSLIIKLREA KNFTPNEIGA AKYIISHSDE VIRLSCTELA KKTYTSPATI IRLCKKIGIG 
GYQEFKVILA TEINFFIKNS MEINKNNEID KKDSISDIID KISSLSIDSL KETKILTDKN
VVKSVIDMIN NAEILDLYGS GASHFVALDA NYKFMRIGKV TATYALYDQQ YVQAKNSNEN
HAAIIFSYSG ETAEMIEIAK ILTENKAKII TITKNSDNTL EKFADKSLYV TAKENLYRSA
AIYSRISMLN VIDILYTAYF NLIYEKALEA LGKTRISKTE VKL