Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3841 |
Symbol | |
ID | 8599287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 4075860 |
End bp | 4076711 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003310606 |
Protein GI | 269122429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.412935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTGA TTATCAAATT AAGAGAAGCT AAGAATTTTA CGCCCAATGA AATAGGGGCG GCAAAATATA TAATTTCACA TTCTGATGAA GTAATAAGGC TTTCCTGTAC TGAACTGGCA AAGAAAACAT ATACGAGTCC AGCTACGATA ATCAGATTAT GTAAAAAGAT AGGGATCGGC GGATATCAGG AATTCAAGGT AATATTAGCC ACAGAAATAA ATTTTTTCAT AAAAAACAGT ATGGAAATAA ATAAAAATAA TGAAATAGAC AAAAAAGACT CTATAAGTGA TATTATAGAT AAAATCAGCT CTTTGAGTAT AGATTCCCTG AAAGAAACTA AAATTCTCAC AGATAAAAAT GTGGTAAAAT CAGTGATAGA TATGATTAAT AATGCTGAAA TTCTGGATTT GTACGGTTCA GGGGCATCAC ATTTCGTAGC CTTGGATGCA AATTACAAAT TTATGAGAAT AGGAAAAGTA ACAGCAACAT ATGCACTTTA TGACCAGCAG TATGTACAGG CAAAAAATTC CAATGAAAAC CATGCTGCTA TTATATTTTC CTATTCCGGT GAAACTGCTG AAATGATAGA AATAGCAAAA ATTCTTACTG AAAATAAAGC TAAAATTATA ACAATCACTA AAAATTCAGA TAATACCCTT GAAAAATTTG CTGATAAGTC GCTTTATGTA ACCGCAAAAG AAAATTTATA CAGAAGTGCT GCTATATATT CAAGAATATC CATGCTGAAT GTTATTGATA TATTGTATAC AGCATATTTT AACCTGATTT ATGAAAAAGC ACTGGAAGCA TTGGGAAAAA CAAGGATATC TAAAACGGAA GTAAAATTAT AA
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Protein sequence | MSLIIKLREA KNFTPNEIGA AKYIISHSDE VIRLSCTELA KKTYTSPATI IRLCKKIGIG GYQEFKVILA TEINFFIKNS MEINKNNEID KKDSISDIID KISSLSIDSL KETKILTDKN VVKSVIDMIN NAEILDLYGS GASHFVALDA NYKFMRIGKV TATYALYDQQ YVQAKNSNEN HAAIIFSYSG ETAEMIEIAK ILTENKAKII TITKNSDNTL EKFADKSLYV TAKENLYRSA AIYSRISMLN VIDILYTAYF NLIYEKALEA LGKTRISKTE VKL
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