Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3787 |
Symbol | |
ID | 8599233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 4025499 |
End bp | 4026764 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | L-rhamnose isomerase |
Protein accession | YP_003310552 |
Protein GI | 269122375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAATA AGGAAAATAT TATAAAAAGC TATGAGCTTG CAAAAGAACA ATACGGAAAA ATAGGTGTGG ATACAGATGA AATATTAAAA AGACTGGATG AAATAATGAT TTCTGTTCAT TGCTGGCAGG GAGACGATGT GCAGGGGTTT GAAAATCCGG AGGGAGCATT AACCGGCGGA ATTCAGGCTA CAGGGAATTA TCCCGGAAAG GCAAGAAGCG CCGACGAACT GAGACAGGAT CTGGAAATGG TATTTAAGCT TGTACCCGGA AAACATAAGG TAAATCTTCA TGCGATATAC GGAGAGTTTG GAGGAGAAAA AACAGGAAGA GACGAGATAA AGCCCGAACA CTTTAGGAAT TGGGTAGAAT GGGCAAAAAA AATGAATCTT GGTCTTGATT TTAACCCGAC ATTATTCTCA CATCCCCTTG CAGAAGAAGC GACTTTATCA CATCCTGACA AAAAAATAAG GGATTATTGG ATAAAGCACT GCAAAGCTTC GAGAAAAATA GGGGAGTATT TCGGAAAGGA GCTTGGTATT CCGTGTGTAA CTAATATATG GATTCCCGAC GGATATAAGG ATATACCCGT AGACAGATAT ATGCCGAGAA AACGTCTGAA AGAATCACTT GATGAAATTA TGAAAGAAAA AATCAACCCT GAATATAATC TTGATGCAGT GGAATCAAAG GTATTCGGTC TGGGGCTGGA ATCTTACACT GTGGGATCAC ATGAATTTTA TATGGGTTAT GCTGTGGAAA ATAAAACACT TTTGTGTCTT GATGCAGGAC ATTTTCATCC TACGGAAGTA ATATCGGATA AGATACCGTC AGTGCTCTTA TTTCTTGATC AGATACTGCT TCATGTAAGC AGACCGGTAA AATGGGACAG TGATCATGTT GTTATTCTGG ATGACGAGCT GAGAGCAATA GCAAATCAGA TTATAAGATA TGATTTTGAT AAAAGAGTGC ATATAGGGAT AGATTTCTTT GATGCAAGTA TAAACAGAAT AGCAGCATGG GCAATAGGAG TAAGAAACAC AAGAAAGGCA TTAATGCTTG CTCTTTTGGA GCCAGTGGAA AAATTAAAGG AAACAGAGCT TTCGGGAGAT TTCACAAGCA GACTTGCACT TCTTGAAGAA TATAAAATGT ATCCTGCCGG AGCAGTATGG GATTATTACT GCAGTGTAAA GAATATCCCA GCAGGGGAAG CATGGCTTGA GATTGTAAAG GAATATGAAA GAAATGAATT AAGCAAAAGA AGCTGA
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Protein sequence | MQNKENIIKS YELAKEQYGK IGVDTDEILK RLDEIMISVH CWQGDDVQGF ENPEGALTGG IQATGNYPGK ARSADELRQD LEMVFKLVPG KHKVNLHAIY GEFGGEKTGR DEIKPEHFRN WVEWAKKMNL GLDFNPTLFS HPLAEEATLS HPDKKIRDYW IKHCKASRKI GEYFGKELGI PCVTNIWIPD GYKDIPVDRY MPRKRLKESL DEIMKEKINP EYNLDAVESK VFGLGLESYT VGSHEFYMGY AVENKTLLCL DAGHFHPTEV ISDKIPSVLL FLDQILLHVS RPVKWDSDHV VILDDELRAI ANQIIRYDFD KRVHIGIDFF DASINRIAAW AIGVRNTRKA LMLALLEPVE KLKETELSGD FTSRLALLEE YKMYPAGAVW DYYCSVKNIP AGEAWLEIVK EYERNELSKR S
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