| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3734 |
|---|
| Symbol | |
|---|
| ID | 8599180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3970685 |
|---|
| End bp | 3971617 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | Ribosylpyrimidine nucleosidase |
|---|
| Protein accession | YP_003310499 |
|---|
| Protein GI | 269122322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA GAAAAATTAT TATAGATTGT GACCCGGGAC ATGATGATGC TATTGCTCTT
ATGATGGCGT ACAACAATCC AAAACTTGAT CTGCTGGGTA TTACTATTGT GGCGGGGAAT
CAGACTCTCG AAAAAACCCG TCAAAATGGT CTGAATGTAT GTCAGGCACT CAATATTAAA
GTACCGGTAT ATGCCGGAAT GTCACTTCCC ATGGTACGGG AGCAGGTAGT TGCCGCAAAT
GTCCACGGGG AAACAGGTCT GGATGGTCCT GTTTTTGAAC CACTTAAAAT AAAAGCTGAA
GAAAAACATG CTATTACATA TATAATTGAA ACACTTATGA CATCGGATAA TGATATTACT
CTTGTGCCGA TTGGCCCATT AAGCAATATT GCCATGGCTA TGCGTATTGA ACCGCGTATC
ATACCTAAAA TCAAGGAAAT TGTGCTAATG GGAGGAGCCT ATGCAATCGG GAATTTTACT
CCGTCTGCTG AATTTAATTT TTTTGCTGAT CCGGAAGCTG CTCATGTAGT TTTTACTTCT
GGTGTGCCTA TTGTAATGAT GGGATTGGAT TTAACAAACC AGACTGTGTG TACCGAAGAA
GTAATAAAAC GTATGGAAGC TATAGGAAAT AAAGCATCAG CTTTATTCTG CGATATTATG
CGTTTCGTAT TAAAAACACA AAATGAAGAA TTTGGTCTTT CGGGCGGTCC TTTGCATGAC
GCTACCTGTA TTGCATATTT GACAGATCCT TCTTTATTTA TACTGGAGTC AATGTATACA
GCAATAGATA TAAAAAGTGA ATTATGCTAT GGGCGTACAG TCTGCGATGT TCTTGATGTT
CTGAAAAAAC CGCATAATTC TAAAGTAGGA ATGAAAATCG ATGTAGATGA ATTCTGGAAT
ATGGTAGAGA GAAGTATAAA AAGCTATCAG TAA
|
|---|
| Protein sequence | MEKRKIIIDC DPGHDDAIAL MMAYNNPKLD LLGITIVAGN QTLEKTRQNG LNVCQALNIK
VPVYAGMSLP MVREQVVAAN VHGETGLDGP VFEPLKIKAE EKHAITYIIE TLMTSDNDIT
LVPIGPLSNI AMAMRIEPRI IPKIKEIVLM GGAYAIGNFT PSAEFNFFAD PEAAHVVFTS
GVPIVMMGLD LTNQTVCTEE VIKRMEAIGN KASALFCDIM RFVLKTQNEE FGLSGGPLHD
ATCIAYLTDP SLFILESMYT AIDIKSELCY GRTVCDVLDV LKKPHNSKVG MKIDVDEFWN
MVERSIKSYQ
|
|---|
| |