| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3726 |
|---|
| Symbol | |
|---|
| ID | 8599172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3962435 |
|---|
| End bp | 3963454 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003310491 |
|---|
| Protein GI | 269122314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000157755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTCTTTT ACTATTACTC TTAGCAGTTA ATTATAACAG CTTTGCCGTT
TCCAAAGAGG ACAAGGAAAG AGAGAGCTCT TATCTTTTGC AAATAAAAAA TGAAAATGAC
AGTGATGCTA TGTTTGATCT CGGACTATTA TATGATGAGC AGGAAAAATA TGATCTTGCG
GAAAAGTATT ATCTTATGGC CGTGAAATAT AATAACGGCA GTGCCATGAC CAATCTCGGG
CTGATATATG AAAATCAAAA AAAATATGAT CTCGCAGAAA AATATTATCT CATGGCTGTA
GAAGAAGAAT CGGATACCGG TATGTATAAT CTGGGCTTAC TGTATGATAA TCAAAAAAAA
TATACCCTTG CGGAAAAGTA TTACCTTATG GCTATTCAGA AGAATTACAG CGATGCCATG
TATAATTTGG CACTGTTATA TGACAATCAG GAGAAATTCA GCCTTGCAGA AAAATACTAT
CTCATGGCGA TAAAAGAAAA TGACAGTGAT GCGATGTATA ATTTAGCCCT TATATACGAT
AATCAGAAAA AATATCCTCT TGCAGAAAAG TATTATCTCA TGGCTGTTGA AGCCAATGAC
AGTGATGCTA CATTTAATCT GGCGTTACTG TATGACAATC AAAAGAAATA TAATCTCGCA
GAAAAGTATT ATCTTATAGC TGTAAAAGAT AACAGTACCA AGGCTATGTA CAATTTAGGA
ATACTATATA AAATTCAGAA AAAATTCTCC CTTGCAGAAA AATATTACCT TATGGCTATA
AAAAATAACA GCAGTGATGC TATGTTTAAT CTGGGATTAT TATATGACGA GCAGGGAAAA
TACGATCTAG CGGAGAAATA TTATCTTATG GGCGTAAAAC ATAATGACAG CGATTCTATG
TATAATTTGG GAGTTCTGTA TTATAATCAG GAAAAATACC AGACTGCAAA AAATTACTTT
TTAATGGCAG AAAAATTTGG AAATAAAGAA GCAGCAAAAA TATTAAGAGA AAATTTTTAA
|
|---|
| Protein sequence | MKKIILLLLL LAVNYNSFAV SKEDKERESS YLLQIKNEND SDAMFDLGLL YDEQEKYDLA
EKYYLMAVKY NNGSAMTNLG LIYENQKKYD LAEKYYLMAV EEESDTGMYN LGLLYDNQKK
YTLAEKYYLM AIQKNYSDAM YNLALLYDNQ EKFSLAEKYY LMAIKENDSD AMYNLALIYD
NQKKYPLAEK YYLMAVEAND SDATFNLALL YDNQKKYNLA EKYYLIAVKD NSTKAMYNLG
ILYKIQKKFS LAEKYYLMAI KNNSSDAMFN LGLLYDEQGK YDLAEKYYLM GVKHNDSDSM
YNLGVLYYNQ EKYQTAKNYF LMAEKFGNKE AAKILRENF
|
|---|
| |