Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3710 |
Symbol | |
ID | 8599156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3937678 |
End bp | 3944490 |
Gene Length | 6813 bp |
Protein Length | 2270 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310475 |
Protein GI | 269122298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.799117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA ATAAGAAATT ATTAGTATCA TTTCTAGCAC TGAATGCGAT ACTAACATCT TATGCACAGG CAGAAACAGT ACAATCGGCA AGATATGAGC GAATGTATAA CGGAATAGTA AAGAATCTGG AAAAAGGCAG TTCAAATGAA AAAACCTACC AAACAATAGA GAAAATATTA AATCAGAAAA ATAAGGAATT AAAAGATTTG TATCTACAGG GAGATTATAT AGTAAAGCCT GAATATCTGG AATGGCAGGT ATTTTTTACA GGGTTTTATG AAGAATATAA TGAAGGAGTG GATAATTCCA AGGAGAATGC AAAATATCAC TCAAAGGTAA CTGGATATTA TGATGATAAC GGAAATTATG TTGTAACAAG CGGTATGATA GGCGGACTGG AAGGGAAACC ACATAAACCA CTGCAGCAGC CGAAAGAAAT AAATCTTGGA GTTAGTATTC CAATAAAAGG AATGACAAGA GAGCCACTTA ACTTATCTTT GAGTCCAGCA GGAGAAATTG TTATTAATCC AAATACACAA AATATTACTC CACCAACATT TTCATACAAT GGGAGTATAA ATATTAATGA ATTTAGTATA AATTTACCCA GCGTAGATCC ACCAACAATA AATCCAGTTT CAATAATACC GTTTTCAGTT CCTGATACTG GAAATACTGA TGAACAATGG GTACTAAATT GGAGTGGGTC AGGACATCAA ATAGGCTCAG GGTCTTATCA GAATGCTATA ATAGCACAAC AAGATCTGAG CGGAGGTACT TTAAATATTG AAAATAATGG TGGTACATAT ACTGCTGATA TTGCTAATAC TACTATTGTT GGAAAAAAGG GATCAACAAA TACAAGCACA GCAAACGGGG TACTCAATGG TCAGTGGTTG AATTTAAACC AAGCATATAT ATTGAAAATA GTAGGTGGAG TAACAAGTAA TATAGATAAT ATGGAGATAG TTTATCAGGG AAATGCAGGA TCAACACTTA CAAAACCATT ATTCTTTACA GATGCACATA ATAATGGGAA TAGAGCCTCT ATCTGGTCAA TTGGAAATGC TACGAATATA ACATTAAAAG GTGAAAATAT CTTGTTGTAT TCTGTGCAGT CACACGGAAG TGCTACAGAT TCAGGGCTAG AAAATTCAGG AACCATAGTA GCAGATAATC TGTTATCAAA TTCACATGAC AGAATAATTT TTAATACTTC GTATGATAAT ACAATTAATA ATAACAGATA TTTTTATATG ACAAATAATT CTAGCGGACT AATTGAACTT GATGGATTGA GAGATTTACT TGTAGCAGTT AATGTTCCTG GAAATATTAA TGGAGGAACA TACTTTACTA ATGATGGGGA GATATTACTA AATGGTGTAG AGTCTAAAGG AGCTATATTG AATCCGAATG CTCCGAATGG AACTTTTAAT GCACAGATAA ATAATAATCC TGGTGGAACG AAATTGACAT TTAATAATCC ATTGAAACTA AGAGGAGACG GCTCTATAGG TTTAGCTTTT TTAAGGGAAA TAAATCTTGG ATTGTCAAAG CTTAATCTTG TAATAGGTGA TGATAGAAAT AAAGGGTATG ATGCTTCAAC TTATACAACA ACAAAAAATC TTGCATCAAC TGGGAATTTA GCTGGTAATG ATTCTGCCCT TGTAGAGGAT GCAATAGGAA TATATTATAA TGTGACACAA AATATAAGCA CTTTTACTAA TGCTGAAAGA ACATTGGAGA ATTATGATAT AACATTTGGA GATTATGCTA AACATAGTAC ATTAGTGAGA ATAGACAAAG GAGACTTAAT ATTAGGTAAC AGTAATATAT CAACAATAAA TATAGGTGGG GATTCGGGTA ATTTTGGTTT TGTAGTAACA GGATCTAATT CATCACTAGA GGTACGACCA GATATACAAG TAGGAACTTC TCTGAAAAAT TCAGATAATT CAATAGCAGC ATATGCTGGG AATAATGGAG AGATAACATT CAGTGGAACA ACAGTAAATA CATATGGAAT AGGAGCACAT GCTTTTTTTG CGGAAACAGG TGGTACTATA AAAAATAATG CGACCATTTT AAACAGAGTA AATGTAACTA CAGTTAGAGA TGAAACAGCA ACATTATTTG CAGATGGAGG AAGTATAATA TTTAATAATG GTGGTGATTA TAAAGCATTG GGGGATAAAT CACTAACAGT ATATGCAGAT AATGGAGGAA TAGTTACCTT AAGATCAGGA GTTGGAACTA ATAATTATGA AGTAAATACA AATGGAGTAT TGTTTTACAA AGATAATTTA GGAGAAATTA ATATAGACGC TACAGGAGGC AAAGCAATAA TGAGCGTCGG AGATGGTTCA GTATTTGCAA TTTCAAATGG TGGAACAAAC AAAATTAATT TTTTAGGAAC GGCAGGGGAT TTAGAGGTAA CATTAAAAAA TGGATCAACA GGATTTATAT TTGATTCTCT TGGTAGTCCA TTGTCGATAG CTGGGATAAA TTCTGCGCTT GCAAATAATT TTTCAGGATT GACTAATTTA GATATGACAC TAGATGCAGG ATCAAGATTA TTTGTAGTAG AAAATTATGG GACATCAGAT TTTAGTGCAG TTTCTAGCAT AAGTTTGGGT ACAGGAATAT TTAATAATGT ATTCGATAAT GGTGGAAAAG GGATGTTTCT ATGGAAGGGT GTATTAAAAT TAGATGGAAT TGGAACTGTA AATTTAGACA ATGCTTCCGA CCCGTACTTT AATGTAGAAA AGTCTGTGTC TGGTGTAGAA GTTGATACAG GTTATGTAGT AAATGGTACA AAAGATAATC AAATTGGTTT TGCTGATATA AATCCATATT CTACAGTATA TGTGAAAATG ACTAATAATG GAATAATCAG TTTAACTGGA AAAAATACAA TAGGATTTTA TACTGATAAT GGGGAAATTA ATAATAATAG TACATTAAAT ATAACAGGCC AAGGTGGATT AGCCATTTTT GGAGAAAATG ATACAAAAAT AAAAAATACA GGAACAATAA CAATAGGTGA TGCAGGAATA GGTATTTATG GAATTTCTTA TCAAACACCT TCTTCTGCCC AGACATACGG TAATGGAAAA ATAGATATTG AGAATAATGG TACAATAATT GCAGGTGTTG GATCTAAAGC AATTGGAGTA TATGCTAATA ATAATAAGAC AGGAGGGATA CTAGGAGATG CACAAATAAA ACTTTTATCA GGAATTGTAG ATGTTTCCGC TTCAGATAGT GGAATAGGAG TTTATGTAAA TAAAGGAACT GTAACTGATT TAGGCTCTAC AATAACCGTA GGTAAAAACG GAGTAGCCTT TTATGCTAAA GATAGTCATG TAACTTTGAC AGGAACTACG ATAAATTTAT TTGGAGATAA TTCATTAGGA ATTTACCTTG ATGGAGTAAC AAACTTTAAT GGTAGTGGTG ATATAAATAT AAATGGTAAA AATATAGTAT TATTTAATAT GAATTCAAGT GGAATAATTT CTAATAACTT TAATGTAACG GGAATAGCTC CAGGTTCTAC TTATACGATA GGGAATATAG TAAATGGATC ATTTAATTAC ACAGGATCAA GTATACTTTC ATCAAATGGA GTATTAGTAT CGGGTCAATA TTCATCAGTA TTTCTAAACG GGTCAACAAT AACAGTAAAT CCGGGTTCTA CGAATGTAGC AGCAATAGCT CTTGATGGAC AGGCTGGAAC TTTTGTTGCA GGAATGTCGG CTAACACAGA TGGTGAAAAT AACGGGACAA TAATTTTGGA AAATGTATCA GTAGGATTAT ATGGTAAGAA TGGTGCAAGA CTGAAAAATA CAGGGGGAAC AATAACAGTA GGAGATCAGT CAGCTGGAAT AATGACATCA GGAGCAGGAA GTACAGCAGT GAATACTGGG ATAATAACTG TAGGATCTGG TTCACAGGGA ATTACGCTAA AAGACGGAGC AGATATTATA AATGATACAG GTGCTGGTAT ATTTAGCTCT GGAATTAATT CAGTAGGAAT ATATGCAGAT AATGTGACAG CTCCTATAAT AAACAATGGA ACGATACAGC TTCTGGGGGA TAAGTCAATA GGAATATTCA CTAAAGGTGC GAGCGTAAAA GCAATAAATA ATACCGGATT AATAGAGGTA GGGAATTCGA GCAGCATAAA TGATCCGAGC ATAGGAATAT TCAGTGAAAA TGCAGGAGAT GTGATAACAA ATACAAATAC AATAAAATCT GGAATAAATT CAATAGGAAT ATACAGCGCA GGAGGAACAG TAATCCAAAA CGGAGTATCT GATATAGGAA ATACAGGAGT AGGAATATAC TCTACAAATG GAACAGTAAA TGTAGGGGGG ACTTCGGTAT TTAATTTTGG AACTGACAAT GCAGTAGGAG TATATGCGAT AAATTCTGCA GTAACAAATA ATGCGACAAT GAATATAGGA AGCGGAAATT ATGGTTTTGT TCTTACAAAT GGTACATTTA CAGGAGGAAC GGGCAGTGTA ACTATGGGAA GTGACTCGGT TTATGTTTAT AGATCTGGTT TGGGAACAAT TACAAATGGT TCTACAGTGA CAATGAGCGG TTCAGATAAC ATAGGTTTCT ATATAGTAGA TGGCGGAGAA ATTGTAAATA ATGCCAATAT AACAGGAACA ATAGGAAATA ATAACGTTGG TATTTATAAT GTAGGGGGAA AAATTGATAA TACTGGAACA ATTGCAGTAG GAGCTTCAGA CCTTATAATT CTTACTGATT CAGATGGTGT AAAATCCGTG GATGTTCAAA ACAGTAAATA TGCTGTAGGA GTTTACGGGG AAAATTCTGT TATTACAAAT CAATCATTAG GGAATATTTC AATTGGTTAT GGTTCAATAG GAGTAGTTGC TAAAAAAGGA AGTGCTGTAA ATGACGGAGC AATTACAGGA ACCGGGGATA GAATGATGGG AATGTATTCT GAAGGGGCTA CTGTAACTAA TAATGGAACT ATAACATTAG TTGGAGATGA TGTTATAGGA ATGGCAGGTA ATGGAAAAGG TTCTGTATTA ATAAACAGTT CAACAGGAGT TATAAATGTA AGCGGTCAAA ATGCAATAGG AATGTATGGA AATCTTAAAT CAGAAATAAT AAATGCAGGT ACGATAATAG CTAATGGACC GGGAGCTCAG GGAATAGTGC TGTCACAGGG TTCTACTTTA GATAATACAG TATCCGGAAC AATGATAGTA AATTCTATTA CATCTGGAAA TTATGGTTCA TCTGTTGGGA CTACATATCC GACACCTTCA ATAATAAATT CAGGGGTAAT AAAGGTATCG GAAAAATTTG AAACTGACGG AATAAATGTA GTGATAAAAG TAGATCCAAG TACAGTAACA GTACCGACAG CTTCGGAAGT AACAACCGGA GGATATGATC CTATAGCACA CGGGGCGGAT TATCTGATAT CCAATGCGAC AAGTATAGAA GCACCATCAT TTAATATAAC AAATCCATTA CAGATAACTG GAAATTTTGC AGAAGGAACA AATGTGAAGA AGTATAAACT GGAGGATGTA ATAATACCAG GATCAGGAAA TGGAATAGAT GCAGGATTAG TTCCGGTAGT AAGTAAATCA CTAACATGGA GAGCGACACC TGTAGTGAAT AATTCTGGAA ATGTAGATAT CTGGATGGAG AAAATAGACT ATGACGAATT CACAGATGGT TTATGGTATG AAGATTTTGG ACGTGCATTG GATGATAAAT ACTTTAATGC TCAGGGAGAT GCCTTAAAGA TTTATGATAA AATAGATGTA ATAGAAACAG AATCTGATTT CAGACATGTA ATGGCAAGTC TTGCAGGAAA TGTATATGCT AATATAAACC AGAGAGAATA CGACATAGCA AAGGCATTTG AAGAATCACT GCACTTATTG CAGGATTCAA CAAACAATAC AAAAGAAAAT GTAAAAATAA GTGTAATAGC TGGAAAAGGT AAAAATAAAG AAGAAACAGA CGGTGTAACA GGGTATGACT ATACAACAAC AGGAGTACTG GCTTTAAGAG AAGTGGAAAG AACATATAAG CATACATTTG GTTATTCATT AGGATATGTT CATACAGGCT TTGAATTCAA AGACGGAAAT GAAAGTGAAG AATGGGTAGA TACAATCCAG CTGGGAGTAC ATAACAAGTA TAGATCAAAT GGATGGAAAA TAGTAAATGA CCTGACAGGA AGAGCAAGTA TCCATAATGT GGACAGAAAT ATAGACTGGC CTTCACCGTT AGAAAGATCA GAAATGAACG GAACATATGA AACATACAGT ATAACAAGTG ACAATATACT AGGGAAAGAA TTCGGATTAG GGAAAAAAGC AAGTATAATG CCATATGGAG CATTCAGAGC AATGTATGTG ACAAGACCTA CATTTAATGA AAGCGGACTG GAAGCCCTTG AGGTGGAAGG AAATGATGCA TGGAGTGCGA AGCCTAGAGC TGGGGTAGAG CTGAAAGGAG CAATACCTTT AGGAGCTAAG ACAGCATGGC AGCTGAAAGG AACACTTGAC CTTGCATACG AATATGAGCT TGCAGACCTT AATGAAAGAG AAAAGGCAAG ACTGATAGCC ATAGAAGACG GCTATCATAA ATTGTCGAAG CCGGAAGATG AAAAAGGAAC ATTCAGAACA AGAGCGGCAA TAGGAGTAGA GGTAGAAGAC AGATACGGAA TATTCCTGAC AGGAGAATAC TCAACAGGAA ATGATAAGGA AAATGATTAC AGAGCAGGAG TAACTTTAAA GGCAGTATTT TAA
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Protein sequence | MKRNKKLLVS FLALNAILTS YAQAETVQSA RYERMYNGIV KNLEKGSSNE KTYQTIEKIL NQKNKELKDL YLQGDYIVKP EYLEWQVFFT GFYEEYNEGV DNSKENAKYH SKVTGYYDDN GNYVVTSGMI GGLEGKPHKP LQQPKEINLG VSIPIKGMTR EPLNLSLSPA GEIVINPNTQ NITPPTFSYN GSININEFSI NLPSVDPPTI NPVSIIPFSV PDTGNTDEQW VLNWSGSGHQ IGSGSYQNAI IAQQDLSGGT LNIENNGGTY TADIANTTIV GKKGSTNTST ANGVLNGQWL NLNQAYILKI VGGVTSNIDN MEIVYQGNAG STLTKPLFFT DAHNNGNRAS IWSIGNATNI TLKGENILLY SVQSHGSATD SGLENSGTIV ADNLLSNSHD RIIFNTSYDN TINNNRYFYM TNNSSGLIEL DGLRDLLVAV NVPGNINGGT YFTNDGEILL NGVESKGAIL NPNAPNGTFN AQINNNPGGT KLTFNNPLKL RGDGSIGLAF LREINLGLSK LNLVIGDDRN KGYDASTYTT TKNLASTGNL AGNDSALVED AIGIYYNVTQ NISTFTNAER TLENYDITFG DYAKHSTLVR IDKGDLILGN SNISTINIGG DSGNFGFVVT GSNSSLEVRP DIQVGTSLKN SDNSIAAYAG NNGEITFSGT TVNTYGIGAH AFFAETGGTI KNNATILNRV NVTTVRDETA TLFADGGSII FNNGGDYKAL GDKSLTVYAD NGGIVTLRSG VGTNNYEVNT NGVLFYKDNL GEINIDATGG KAIMSVGDGS VFAISNGGTN KINFLGTAGD LEVTLKNGST GFIFDSLGSP LSIAGINSAL ANNFSGLTNL DMTLDAGSRL FVVENYGTSD FSAVSSISLG TGIFNNVFDN GGKGMFLWKG VLKLDGIGTV NLDNASDPYF NVEKSVSGVE VDTGYVVNGT KDNQIGFADI NPYSTVYVKM TNNGIISLTG KNTIGFYTDN GEINNNSTLN ITGQGGLAIF GENDTKIKNT GTITIGDAGI GIYGISYQTP SSAQTYGNGK IDIENNGTII AGVGSKAIGV YANNNKTGGI LGDAQIKLLS GIVDVSASDS GIGVYVNKGT VTDLGSTITV GKNGVAFYAK DSHVTLTGTT INLFGDNSLG IYLDGVTNFN GSGDININGK NIVLFNMNSS GIISNNFNVT GIAPGSTYTI GNIVNGSFNY TGSSILSSNG VLVSGQYSSV FLNGSTITVN PGSTNVAAIA LDGQAGTFVA GMSANTDGEN NGTIILENVS VGLYGKNGAR LKNTGGTITV GDQSAGIMTS GAGSTAVNTG IITVGSGSQG ITLKDGADII NDTGAGIFSS GINSVGIYAD NVTAPIINNG TIQLLGDKSI GIFTKGASVK AINNTGLIEV GNSSSINDPS IGIFSENAGD VITNTNTIKS GINSIGIYSA GGTVIQNGVS DIGNTGVGIY STNGTVNVGG TSVFNFGTDN AVGVYAINSA VTNNATMNIG SGNYGFVLTN GTFTGGTGSV TMGSDSVYVY RSGLGTITNG STVTMSGSDN IGFYIVDGGE IVNNANITGT IGNNNVGIYN VGGKIDNTGT IAVGASDLII LTDSDGVKSV DVQNSKYAVG VYGENSVITN QSLGNISIGY GSIGVVAKKG SAVNDGAITG TGDRMMGMYS EGATVTNNGT ITLVGDDVIG MAGNGKGSVL INSSTGVINV SGQNAIGMYG NLKSEIINAG TIIANGPGAQ GIVLSQGSTL DNTVSGTMIV NSITSGNYGS SVGTTYPTPS IINSGVIKVS EKFETDGINV VIKVDPSTVT VPTASEVTTG GYDPIAHGAD YLISNATSIE APSFNITNPL QITGNFAEGT NVKKYKLEDV IIPGSGNGID AGLVPVVSKS LTWRATPVVN NSGNVDIWME KIDYDEFTDG LWYEDFGRAL DDKYFNAQGD ALKIYDKIDV IETESDFRHV MASLAGNVYA NINQREYDIA KAFEESLHLL QDSTNNTKEN VKISVIAGKG KNKEETDGVT GYDYTTTGVL ALREVERTYK HTFGYSLGYV HTGFEFKDGN ESEEWVDTIQ LGVHNKYRSN GWKIVNDLTG RASIHNVDRN IDWPSPLERS EMNGTYETYS ITSDNILGKE FGLGKKASIM PYGAFRAMYV TRPTFNESGL EALEVEGNDA WSAKPRAGVE LKGAIPLGAK TAWQLKGTLD LAYEYELADL NEREKARLIA IEDGYHKLSK PEDEKGTFRT RAAIGVEVED RYGIFLTGEY STGNDKENDY RAGVTLKAVF
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