| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3710 |
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| Symbol | |
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| ID | 8599156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | - |
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| Start bp | 3937678 |
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| End bp | 3944490 |
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| Gene Length | 6813 bp |
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| Protein Length | 2270 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003310475 |
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| Protein GI | 269122298 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.799117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA ATAAGAAATT ATTAGTATCA TTTCTAGCAC TGAATGCGAT ACTAACATCT
TATGCACAGG CAGAAACAGT ACAATCGGCA AGATATGAGC GAATGTATAA CGGAATAGTA
AAGAATCTGG AAAAAGGCAG TTCAAATGAA AAAACCTACC AAACAATAGA GAAAATATTA
AATCAGAAAA ATAAGGAATT AAAAGATTTG TATCTACAGG GAGATTATAT AGTAAAGCCT
GAATATCTGG AATGGCAGGT ATTTTTTACA GGGTTTTATG AAGAATATAA TGAAGGAGTG
GATAATTCCA AGGAGAATGC AAAATATCAC TCAAAGGTAA CTGGATATTA TGATGATAAC
GGAAATTATG TTGTAACAAG CGGTATGATA GGCGGACTGG AAGGGAAACC ACATAAACCA
CTGCAGCAGC CGAAAGAAAT AAATCTTGGA GTTAGTATTC CAATAAAAGG AATGACAAGA
GAGCCACTTA ACTTATCTTT GAGTCCAGCA GGAGAAATTG TTATTAATCC AAATACACAA
AATATTACTC CACCAACATT TTCATACAAT GGGAGTATAA ATATTAATGA ATTTAGTATA
AATTTACCCA GCGTAGATCC ACCAACAATA AATCCAGTTT CAATAATACC GTTTTCAGTT
CCTGATACTG GAAATACTGA TGAACAATGG GTACTAAATT GGAGTGGGTC AGGACATCAA
ATAGGCTCAG GGTCTTATCA GAATGCTATA ATAGCACAAC AAGATCTGAG CGGAGGTACT
TTAAATATTG AAAATAATGG TGGTACATAT ACTGCTGATA TTGCTAATAC TACTATTGTT
GGAAAAAAGG GATCAACAAA TACAAGCACA GCAAACGGGG TACTCAATGG TCAGTGGTTG
AATTTAAACC AAGCATATAT ATTGAAAATA GTAGGTGGAG TAACAAGTAA TATAGATAAT
ATGGAGATAG TTTATCAGGG AAATGCAGGA TCAACACTTA CAAAACCATT ATTCTTTACA
GATGCACATA ATAATGGGAA TAGAGCCTCT ATCTGGTCAA TTGGAAATGC TACGAATATA
ACATTAAAAG GTGAAAATAT CTTGTTGTAT TCTGTGCAGT CACACGGAAG TGCTACAGAT
TCAGGGCTAG AAAATTCAGG AACCATAGTA GCAGATAATC TGTTATCAAA TTCACATGAC
AGAATAATTT TTAATACTTC GTATGATAAT ACAATTAATA ATAACAGATA TTTTTATATG
ACAAATAATT CTAGCGGACT AATTGAACTT GATGGATTGA GAGATTTACT TGTAGCAGTT
AATGTTCCTG GAAATATTAA TGGAGGAACA TACTTTACTA ATGATGGGGA GATATTACTA
AATGGTGTAG AGTCTAAAGG AGCTATATTG AATCCGAATG CTCCGAATGG AACTTTTAAT
GCACAGATAA ATAATAATCC TGGTGGAACG AAATTGACAT TTAATAATCC ATTGAAACTA
AGAGGAGACG GCTCTATAGG TTTAGCTTTT TTAAGGGAAA TAAATCTTGG ATTGTCAAAG
CTTAATCTTG TAATAGGTGA TGATAGAAAT AAAGGGTATG ATGCTTCAAC TTATACAACA
ACAAAAAATC TTGCATCAAC TGGGAATTTA GCTGGTAATG ATTCTGCCCT TGTAGAGGAT
GCAATAGGAA TATATTATAA TGTGACACAA AATATAAGCA CTTTTACTAA TGCTGAAAGA
ACATTGGAGA ATTATGATAT AACATTTGGA GATTATGCTA AACATAGTAC ATTAGTGAGA
ATAGACAAAG GAGACTTAAT ATTAGGTAAC AGTAATATAT CAACAATAAA TATAGGTGGG
GATTCGGGTA ATTTTGGTTT TGTAGTAACA GGATCTAATT CATCACTAGA GGTACGACCA
GATATACAAG TAGGAACTTC TCTGAAAAAT TCAGATAATT CAATAGCAGC ATATGCTGGG
AATAATGGAG AGATAACATT CAGTGGAACA ACAGTAAATA CATATGGAAT AGGAGCACAT
GCTTTTTTTG CGGAAACAGG TGGTACTATA AAAAATAATG CGACCATTTT AAACAGAGTA
AATGTAACTA CAGTTAGAGA TGAAACAGCA ACATTATTTG CAGATGGAGG AAGTATAATA
TTTAATAATG GTGGTGATTA TAAAGCATTG GGGGATAAAT CACTAACAGT ATATGCAGAT
AATGGAGGAA TAGTTACCTT AAGATCAGGA GTTGGAACTA ATAATTATGA AGTAAATACA
AATGGAGTAT TGTTTTACAA AGATAATTTA GGAGAAATTA ATATAGACGC TACAGGAGGC
AAAGCAATAA TGAGCGTCGG AGATGGTTCA GTATTTGCAA TTTCAAATGG TGGAACAAAC
AAAATTAATT TTTTAGGAAC GGCAGGGGAT TTAGAGGTAA CATTAAAAAA TGGATCAACA
GGATTTATAT TTGATTCTCT TGGTAGTCCA TTGTCGATAG CTGGGATAAA TTCTGCGCTT
GCAAATAATT TTTCAGGATT GACTAATTTA GATATGACAC TAGATGCAGG ATCAAGATTA
TTTGTAGTAG AAAATTATGG GACATCAGAT TTTAGTGCAG TTTCTAGCAT AAGTTTGGGT
ACAGGAATAT TTAATAATGT ATTCGATAAT GGTGGAAAAG GGATGTTTCT ATGGAAGGGT
GTATTAAAAT TAGATGGAAT TGGAACTGTA AATTTAGACA ATGCTTCCGA CCCGTACTTT
AATGTAGAAA AGTCTGTGTC TGGTGTAGAA GTTGATACAG GTTATGTAGT AAATGGTACA
AAAGATAATC AAATTGGTTT TGCTGATATA AATCCATATT CTACAGTATA TGTGAAAATG
ACTAATAATG GAATAATCAG TTTAACTGGA AAAAATACAA TAGGATTTTA TACTGATAAT
GGGGAAATTA ATAATAATAG TACATTAAAT ATAACAGGCC AAGGTGGATT AGCCATTTTT
GGAGAAAATG ATACAAAAAT AAAAAATACA GGAACAATAA CAATAGGTGA TGCAGGAATA
GGTATTTATG GAATTTCTTA TCAAACACCT TCTTCTGCCC AGACATACGG TAATGGAAAA
ATAGATATTG AGAATAATGG TACAATAATT GCAGGTGTTG GATCTAAAGC AATTGGAGTA
TATGCTAATA ATAATAAGAC AGGAGGGATA CTAGGAGATG CACAAATAAA ACTTTTATCA
GGAATTGTAG ATGTTTCCGC TTCAGATAGT GGAATAGGAG TTTATGTAAA TAAAGGAACT
GTAACTGATT TAGGCTCTAC AATAACCGTA GGTAAAAACG GAGTAGCCTT TTATGCTAAA
GATAGTCATG TAACTTTGAC AGGAACTACG ATAAATTTAT TTGGAGATAA TTCATTAGGA
ATTTACCTTG ATGGAGTAAC AAACTTTAAT GGTAGTGGTG ATATAAATAT AAATGGTAAA
AATATAGTAT TATTTAATAT GAATTCAAGT GGAATAATTT CTAATAACTT TAATGTAACG
GGAATAGCTC CAGGTTCTAC TTATACGATA GGGAATATAG TAAATGGATC ATTTAATTAC
ACAGGATCAA GTATACTTTC ATCAAATGGA GTATTAGTAT CGGGTCAATA TTCATCAGTA
TTTCTAAACG GGTCAACAAT AACAGTAAAT CCGGGTTCTA CGAATGTAGC AGCAATAGCT
CTTGATGGAC AGGCTGGAAC TTTTGTTGCA GGAATGTCGG CTAACACAGA TGGTGAAAAT
AACGGGACAA TAATTTTGGA AAATGTATCA GTAGGATTAT ATGGTAAGAA TGGTGCAAGA
CTGAAAAATA CAGGGGGAAC AATAACAGTA GGAGATCAGT CAGCTGGAAT AATGACATCA
GGAGCAGGAA GTACAGCAGT GAATACTGGG ATAATAACTG TAGGATCTGG TTCACAGGGA
ATTACGCTAA AAGACGGAGC AGATATTATA AATGATACAG GTGCTGGTAT ATTTAGCTCT
GGAATTAATT CAGTAGGAAT ATATGCAGAT AATGTGACAG CTCCTATAAT AAACAATGGA
ACGATACAGC TTCTGGGGGA TAAGTCAATA GGAATATTCA CTAAAGGTGC GAGCGTAAAA
GCAATAAATA ATACCGGATT AATAGAGGTA GGGAATTCGA GCAGCATAAA TGATCCGAGC
ATAGGAATAT TCAGTGAAAA TGCAGGAGAT GTGATAACAA ATACAAATAC AATAAAATCT
GGAATAAATT CAATAGGAAT ATACAGCGCA GGAGGAACAG TAATCCAAAA CGGAGTATCT
GATATAGGAA ATACAGGAGT AGGAATATAC TCTACAAATG GAACAGTAAA TGTAGGGGGG
ACTTCGGTAT TTAATTTTGG AACTGACAAT GCAGTAGGAG TATATGCGAT AAATTCTGCA
GTAACAAATA ATGCGACAAT GAATATAGGA AGCGGAAATT ATGGTTTTGT TCTTACAAAT
GGTACATTTA CAGGAGGAAC GGGCAGTGTA ACTATGGGAA GTGACTCGGT TTATGTTTAT
AGATCTGGTT TGGGAACAAT TACAAATGGT TCTACAGTGA CAATGAGCGG TTCAGATAAC
ATAGGTTTCT ATATAGTAGA TGGCGGAGAA ATTGTAAATA ATGCCAATAT AACAGGAACA
ATAGGAAATA ATAACGTTGG TATTTATAAT GTAGGGGGAA AAATTGATAA TACTGGAACA
ATTGCAGTAG GAGCTTCAGA CCTTATAATT CTTACTGATT CAGATGGTGT AAAATCCGTG
GATGTTCAAA ACAGTAAATA TGCTGTAGGA GTTTACGGGG AAAATTCTGT TATTACAAAT
CAATCATTAG GGAATATTTC AATTGGTTAT GGTTCAATAG GAGTAGTTGC TAAAAAAGGA
AGTGCTGTAA ATGACGGAGC AATTACAGGA ACCGGGGATA GAATGATGGG AATGTATTCT
GAAGGGGCTA CTGTAACTAA TAATGGAACT ATAACATTAG TTGGAGATGA TGTTATAGGA
ATGGCAGGTA ATGGAAAAGG TTCTGTATTA ATAAACAGTT CAACAGGAGT TATAAATGTA
AGCGGTCAAA ATGCAATAGG AATGTATGGA AATCTTAAAT CAGAAATAAT AAATGCAGGT
ACGATAATAG CTAATGGACC GGGAGCTCAG GGAATAGTGC TGTCACAGGG TTCTACTTTA
GATAATACAG TATCCGGAAC AATGATAGTA AATTCTATTA CATCTGGAAA TTATGGTTCA
TCTGTTGGGA CTACATATCC GACACCTTCA ATAATAAATT CAGGGGTAAT AAAGGTATCG
GAAAAATTTG AAACTGACGG AATAAATGTA GTGATAAAAG TAGATCCAAG TACAGTAACA
GTACCGACAG CTTCGGAAGT AACAACCGGA GGATATGATC CTATAGCACA CGGGGCGGAT
TATCTGATAT CCAATGCGAC AAGTATAGAA GCACCATCAT TTAATATAAC AAATCCATTA
CAGATAACTG GAAATTTTGC AGAAGGAACA AATGTGAAGA AGTATAAACT GGAGGATGTA
ATAATACCAG GATCAGGAAA TGGAATAGAT GCAGGATTAG TTCCGGTAGT AAGTAAATCA
CTAACATGGA GAGCGACACC TGTAGTGAAT AATTCTGGAA ATGTAGATAT CTGGATGGAG
AAAATAGACT ATGACGAATT CACAGATGGT TTATGGTATG AAGATTTTGG ACGTGCATTG
GATGATAAAT ACTTTAATGC TCAGGGAGAT GCCTTAAAGA TTTATGATAA AATAGATGTA
ATAGAAACAG AATCTGATTT CAGACATGTA ATGGCAAGTC TTGCAGGAAA TGTATATGCT
AATATAAACC AGAGAGAATA CGACATAGCA AAGGCATTTG AAGAATCACT GCACTTATTG
CAGGATTCAA CAAACAATAC AAAAGAAAAT GTAAAAATAA GTGTAATAGC TGGAAAAGGT
AAAAATAAAG AAGAAACAGA CGGTGTAACA GGGTATGACT ATACAACAAC AGGAGTACTG
GCTTTAAGAG AAGTGGAAAG AACATATAAG CATACATTTG GTTATTCATT AGGATATGTT
CATACAGGCT TTGAATTCAA AGACGGAAAT GAAAGTGAAG AATGGGTAGA TACAATCCAG
CTGGGAGTAC ATAACAAGTA TAGATCAAAT GGATGGAAAA TAGTAAATGA CCTGACAGGA
AGAGCAAGTA TCCATAATGT GGACAGAAAT ATAGACTGGC CTTCACCGTT AGAAAGATCA
GAAATGAACG GAACATATGA AACATACAGT ATAACAAGTG ACAATATACT AGGGAAAGAA
TTCGGATTAG GGAAAAAAGC AAGTATAATG CCATATGGAG CATTCAGAGC AATGTATGTG
ACAAGACCTA CATTTAATGA AAGCGGACTG GAAGCCCTTG AGGTGGAAGG AAATGATGCA
TGGAGTGCGA AGCCTAGAGC TGGGGTAGAG CTGAAAGGAG CAATACCTTT AGGAGCTAAG
ACAGCATGGC AGCTGAAAGG AACACTTGAC CTTGCATACG AATATGAGCT TGCAGACCTT
AATGAAAGAG AAAAGGCAAG ACTGATAGCC ATAGAAGACG GCTATCATAA ATTGTCGAAG
CCGGAAGATG AAAAAGGAAC ATTCAGAACA AGAGCGGCAA TAGGAGTAGA GGTAGAAGAC
AGATACGGAA TATTCCTGAC AGGAGAATAC TCAACAGGAA ATGATAAGGA AAATGATTAC
AGAGCAGGAG TAACTTTAAA GGCAGTATTT TAA
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| Protein sequence | MKRNKKLLVS FLALNAILTS YAQAETVQSA RYERMYNGIV KNLEKGSSNE KTYQTIEKIL
NQKNKELKDL YLQGDYIVKP EYLEWQVFFT GFYEEYNEGV DNSKENAKYH SKVTGYYDDN
GNYVVTSGMI GGLEGKPHKP LQQPKEINLG VSIPIKGMTR EPLNLSLSPA GEIVINPNTQ
NITPPTFSYN GSININEFSI NLPSVDPPTI NPVSIIPFSV PDTGNTDEQW VLNWSGSGHQ
IGSGSYQNAI IAQQDLSGGT LNIENNGGTY TADIANTTIV GKKGSTNTST ANGVLNGQWL
NLNQAYILKI VGGVTSNIDN MEIVYQGNAG STLTKPLFFT DAHNNGNRAS IWSIGNATNI
TLKGENILLY SVQSHGSATD SGLENSGTIV ADNLLSNSHD RIIFNTSYDN TINNNRYFYM
TNNSSGLIEL DGLRDLLVAV NVPGNINGGT YFTNDGEILL NGVESKGAIL NPNAPNGTFN
AQINNNPGGT KLTFNNPLKL RGDGSIGLAF LREINLGLSK LNLVIGDDRN KGYDASTYTT
TKNLASTGNL AGNDSALVED AIGIYYNVTQ NISTFTNAER TLENYDITFG DYAKHSTLVR
IDKGDLILGN SNISTINIGG DSGNFGFVVT GSNSSLEVRP DIQVGTSLKN SDNSIAAYAG
NNGEITFSGT TVNTYGIGAH AFFAETGGTI KNNATILNRV NVTTVRDETA TLFADGGSII
FNNGGDYKAL GDKSLTVYAD NGGIVTLRSG VGTNNYEVNT NGVLFYKDNL GEINIDATGG
KAIMSVGDGS VFAISNGGTN KINFLGTAGD LEVTLKNGST GFIFDSLGSP LSIAGINSAL
ANNFSGLTNL DMTLDAGSRL FVVENYGTSD FSAVSSISLG TGIFNNVFDN GGKGMFLWKG
VLKLDGIGTV NLDNASDPYF NVEKSVSGVE VDTGYVVNGT KDNQIGFADI NPYSTVYVKM
TNNGIISLTG KNTIGFYTDN GEINNNSTLN ITGQGGLAIF GENDTKIKNT GTITIGDAGI
GIYGISYQTP SSAQTYGNGK IDIENNGTII AGVGSKAIGV YANNNKTGGI LGDAQIKLLS
GIVDVSASDS GIGVYVNKGT VTDLGSTITV GKNGVAFYAK DSHVTLTGTT INLFGDNSLG
IYLDGVTNFN GSGDININGK NIVLFNMNSS GIISNNFNVT GIAPGSTYTI GNIVNGSFNY
TGSSILSSNG VLVSGQYSSV FLNGSTITVN PGSTNVAAIA LDGQAGTFVA GMSANTDGEN
NGTIILENVS VGLYGKNGAR LKNTGGTITV GDQSAGIMTS GAGSTAVNTG IITVGSGSQG
ITLKDGADII NDTGAGIFSS GINSVGIYAD NVTAPIINNG TIQLLGDKSI GIFTKGASVK
AINNTGLIEV GNSSSINDPS IGIFSENAGD VITNTNTIKS GINSIGIYSA GGTVIQNGVS
DIGNTGVGIY STNGTVNVGG TSVFNFGTDN AVGVYAINSA VTNNATMNIG SGNYGFVLTN
GTFTGGTGSV TMGSDSVYVY RSGLGTITNG STVTMSGSDN IGFYIVDGGE IVNNANITGT
IGNNNVGIYN VGGKIDNTGT IAVGASDLII LTDSDGVKSV DVQNSKYAVG VYGENSVITN
QSLGNISIGY GSIGVVAKKG SAVNDGAITG TGDRMMGMYS EGATVTNNGT ITLVGDDVIG
MAGNGKGSVL INSSTGVINV SGQNAIGMYG NLKSEIINAG TIIANGPGAQ GIVLSQGSTL
DNTVSGTMIV NSITSGNYGS SVGTTYPTPS IINSGVIKVS EKFETDGINV VIKVDPSTVT
VPTASEVTTG GYDPIAHGAD YLISNATSIE APSFNITNPL QITGNFAEGT NVKKYKLEDV
IIPGSGNGID AGLVPVVSKS LTWRATPVVN NSGNVDIWME KIDYDEFTDG LWYEDFGRAL
DDKYFNAQGD ALKIYDKIDV IETESDFRHV MASLAGNVYA NINQREYDIA KAFEESLHLL
QDSTNNTKEN VKISVIAGKG KNKEETDGVT GYDYTTTGVL ALREVERTYK HTFGYSLGYV
HTGFEFKDGN ESEEWVDTIQ LGVHNKYRSN GWKIVNDLTG RASIHNVDRN IDWPSPLERS
EMNGTYETYS ITSDNILGKE FGLGKKASIM PYGAFRAMYV TRPTFNESGL EALEVEGNDA
WSAKPRAGVE LKGAIPLGAK TAWQLKGTLD LAYEYELADL NEREKARLIA IEDGYHKLSK
PEDEKGTFRT RAAIGVEVED RYGIFLTGEY STGNDKENDY RAGVTLKAVF
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