Gene Sterm_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3487 
Symbol 
ID8598937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3691349 
End bp3692518 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content36% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003310256 
Protein GI269122079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT TAGATGGTAT TATTGTTTTA GACTTTAGTC AATATCTGGC CGGCCCTTCA 
GCGACTTTAA GATTAGCTGA TTTAGGTGCC AGAGTTATTA AAATCGAAAG AGTTAACGGC
GGAGACGGCA GCCGGTCTAT GCAGCTTAAA AATCTGACTG TTGATAATGA CAGTTTACTA
TTTCATACAA TAAACAGAAA TAAAGAAAGC TTTACCTGTG ATCTTAAAAA TAAAAATGAC
CTGAAAATGG TCAAAAGGCT TATTGCTAAA GCTGATGTCA TGGTGGAAAA TTTCAGACCG
GGAGTTATGG ACAAAATAGG TTTAGGCTAC GATATAGTGA AAGAAATTAA TCCGAAAATT
ATATACGGTA CTGTTACGGG ATACGGGTCA GAAGGTCCGT GGGCTAAAAA GCCCGGTCAG
GATTTACTTT TACAGTCTAT GTCAGGTCTA ACATGGCTGA ATGGCAACAG CGACCAGCCT
CCTATGCCGT TTGCTCTGAG TATAACCGAT ATTTATACCG GAGTCCATTT GTCAGAAGGA
ATTTTAGCCT GTTTATTCAG AAGATTTAAA ACGGGAAAAG GCGGACTGGT TCAGGTAAGC
CTGCTCGAAT CCATTCTTGA TATGCAGTTT GAAGTTATTA CAACATATCT TAATGACGGA
AAAAAGGCTC CTAAGAGATC AAGCTATAAT AATGCACATG CATATTTAAG CGCTCCTTAT
GGTATTTATG AAACATCTGA TGATTATATT GCATTAGCTA TGGGATCTGT CTTAGAGTTA
GGAGAAATTT TAGGTATTAC AGAACTGAAA CAATATAGTA ATACTGAAAG CTGGTTTGAC
AGCAGAGATG AGATAAAACA GCTAATCGGT GATAAGCTTA AAACAAACAC TGCTGAATAC
TGGCTGGATA TACTAAAAAA GTCCGGTTAT TGGTGTTCGG ATGTCCTAAA CTGGCAGCAG
CTTTTAGAAT CAGAAGGATT CAAAATTTTA GATTTTATTC AAAATATCAA AAGACCAAAT
AGTCAAGATA TTTTCACTAC CAGATGTCCG ATTAAGATAA ACGGAAAAAA TTTAAAATCT
GCTAAATGGG CACCTAAATT AGGTGAAAAT ACAGAAAGTA TTATTGAAGA ATTCAAATTA
AGAGGTGAAA TTCAAAATGA AACCACTTGA
 
Protein sequence
MNLLDGIIVL DFSQYLAGPS ATLRLADLGA RVIKIERVNG GDGSRSMQLK NLTVDNDSLL 
FHTINRNKES FTCDLKNKND LKMVKRLIAK ADVMVENFRP GVMDKIGLGY DIVKEINPKI
IYGTVTGYGS EGPWAKKPGQ DLLLQSMSGL TWLNGNSDQP PMPFALSITD IYTGVHLSEG
ILACLFRRFK TGKGGLVQVS LLESILDMQF EVITTYLNDG KKAPKRSSYN NAHAYLSAPY
GIYETSDDYI ALAMGSVLEL GEILGITELK QYSNTESWFD SRDEIKQLIG DKLKTNTAEY
WLDILKKSGY WCSDVLNWQQ LLESEGFKIL DFIQNIKRPN SQDIFTTRCP IKINGKNLKS
AKWAPKLGEN TESIIEEFKL RGEIQNETT