| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3465 |
|---|
| Symbol | |
|---|
| ID | 8598916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3669708 |
|---|
| End bp | 3671174 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | hydrogenase large subunit domain protein |
|---|
| Protein accession | YP_003310235 |
|---|
| Protein GI | 269122058 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAA TTAAAGATGC TGATCAGATA AAAAATGAAG TCTTACAGAA AACAGCAGAA
TACGCTTTTA AAAATATACT GGCAGAAAAA GCAGAAGATA TACCGTTTGA AATAATATCC
GGAATAAAGC CTCAATTCAG ATGCTGTGTT TACAGGGAAA GAGAAATCAT AAGACAAAGA
GTCAGACTGT CAATGGGGCA GCTTCCGAGA GATGCGGTAT ATACAGAATT AGAGCCTACC
CAGGTAGTAC ATGTAATACC CTGTGCATGT GAAGGATGCC CGATTGTTAG ATTTACAGTT
ACAGATAACT GCCAAAACTG TTTAACAAAG AAGTGTATCA AATCTTGCGC ATTTGGAGCT
ATTTCAGCTA CCAAAAAAGG TGCATATATA GATAAACAGT TATGTAAAAA ATGCGGTAAA
TGTGTGGCAA GCTGCCCTTA TCATGCGATA GTAGATATAG AAAGACCGTG TAAAAAGTCG
TGTCCTGTGG ATGCAATAGA AATAGACGAA AACGATATAG CAATAATAGA CAGCACAAAA
TGTATTAATT GCGGACTCTG CATAAATAAC TGCCCTTTCG GAGCCATTTC CGATGTTTCC
ATGATGACAA ATGTTATTAA TACTTTACTT ACTAATGATA ATGTTTATGC TATGATAGCT
CCGGCAATAG AAGGCCAGTT CGGACCTGAT GCATCGATAG GGGTAATAAA AAACTGGATT
AAAAAGCTGG GCTTTAAGGA TGTATATGAA GTAGCCTTAG GAGCTGATGC AGTAGCATAC
AGAGAAGCAG AGGAATTATC GGAAAATTTT AAAAACGGGA AAAAAATGAC TTCATCATGC
TGTCCCAGTT TTGTAAATTT AATATCTAAA TATTATGGTA ATTTAGTCGA AAATATATCG
ACAACAATTT CTCCAATGGT TGCTACAGCA CGCCTGATAA GAGAAAAGGA TCCTGAAGCT
GTCACAGTAT TTATAGGTCC CTGCGTTACC AAAAAAAATG AAGCATTGAG CCTGTATATA
AAAGAAGTTA ACTATGTTAT TACTTTTGAG GAGCTGGCAG CTATGTTTGC AGGGAAAAAT
ATAGACTTAT CTGCCGGTGA ATGTGATGAA AATTCGGCAA CCAGCTATGG AAAAGGCTTT
GCCAAATCAG GCGGAGTTGC TGCTGCGGTG TTAAAAGTAC TGGAAGAAAA AGGAATAAAC
GAGGACATAA AAATATTAAA CTGCAACGGA ATCGATGAAT GTAAAAAAGC ATTGCTGATG
TTAAAAGCCG GAAGACTGAA AGAAGACTTC ATAGAAGGCA TGTCCTGTGT TCACGGATGC
TTAGGAGGTC CTGTAAATCT AAAAGCTGTA AATGAATCCA GAAAAACATT TGATAAATAT
CAAAAAAATC AAAATGATAA TATCTTAAAA AACAATGTCT CAAAAAAATT GGACACAATA
GATATTCATA AGGTATCTAA AACTTAA
|
|---|
| Protein sequence | MDEIKDADQI KNEVLQKTAE YAFKNILAEK AEDIPFEIIS GIKPQFRCCV YREREIIRQR
VRLSMGQLPR DAVYTELEPT QVVHVIPCAC EGCPIVRFTV TDNCQNCLTK KCIKSCAFGA
ISATKKGAYI DKQLCKKCGK CVASCPYHAI VDIERPCKKS CPVDAIEIDE NDIAIIDSTK
CINCGLCINN CPFGAISDVS MMTNVINTLL TNDNVYAMIA PAIEGQFGPD ASIGVIKNWI
KKLGFKDVYE VALGADAVAY REAEELSENF KNGKKMTSSC CPSFVNLISK YYGNLVENIS
TTISPMVATA RLIREKDPEA VTVFIGPCVT KKNEALSLYI KEVNYVITFE ELAAMFAGKN
IDLSAGECDE NSATSYGKGF AKSGGVAAAV LKVLEEKGIN EDIKILNCNG IDECKKALLM
LKAGRLKEDF IEGMSCVHGC LGGPVNLKAV NESRKTFDKY QKNQNDNILK NNVSKKLDTI
DIHKVSKT
|
|---|
| |