Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3440 |
Symbol | |
ID | 8598891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3643672 |
End bp | 3644466 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003310210 |
Protein GI | 269122033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000288198 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAG GTTTGAAAAA GAAAAAAGCT CTGGTAACCG GTTCGACAAA AGGAATAGGG AAAGCTATTG CCGCAGAACT AGCACGTGAG GGTGCCGATG TTGTTATCAA CGGACGTAAT ATAACAGAAG TGAACCAGAT CGTCGAGAAT CTGCAAAATC AATTTCCCGA TGTCTCAATA ACAGGTGCAG CAGCTGATCT GGCAAAAGAA GCAGAGAGAT TCTTTTTATT TGAACAGGTT CCCGAGATTG ATATTTTAAT AAACAATATG GGAATATTTC AGCCTATGAA ATACTGGGAT ATTACAGATG ATATATGGAA TAAATTCTTT GATACAAATG TCCTGTCAGG GAATGCCTTA GCGAAGTTTT ATATGCCGAA GATGCTGGAA AATAATTTTG GCAGAGTTAT ATTTATAGCA AGCGAGGAGG CTGTTATGCC GTCCGGAGAA ATGGCGCAGT ACAGTATGAC AAAGACTATG AATCTGTCAT TGGCAAAAAG TCTTTCCAAG CTTACAAAAG GGACAAATGT TACAGTTAAT ACAATTATGC CGGGTTCGAC TTTAACAGAA GGAGTAGAGG ATATGATACG AAAAATGTAT CAAAACAGTA CAATTCCGGA ATCTGAATGG GAGTCTGACT TTATGAAGAA TCACAGACCG CTTTCTCAGA TTCAGCGCCT TATCCGCCCG GAAGAAATCG GAAGATTTGC AGCGTATATA TCCAGTCCTT TTGCATCTTC TTTCTCCGGC GCCGCATTAA GGCTAGACGG AGGTTTGGTT CCTACTATTT TTTAA
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Protein sequence | MELGLKKKKA LVTGSTKGIG KAIAAELARE GADVVINGRN ITEVNQIVEN LQNQFPDVSI TGAAADLAKE AERFFLFEQV PEIDILINNM GIFQPMKYWD ITDDIWNKFF DTNVLSGNAL AKFYMPKMLE NNFGRVIFIA SEEAVMPSGE MAQYSMTKTM NLSLAKSLSK LTKGTNVTVN TIMPGSTLTE GVEDMIRKMY QNSTIPESEW ESDFMKNHRP LSQIQRLIRP EEIGRFAAYI SSPFASSFSG AALRLDGGLV PTIF
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