Gene Sterm_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3440 
Symbol 
ID8598891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3643672 
End bp3644466 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content40% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003310210 
Protein GI269122033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000288198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAG GTTTGAAAAA GAAAAAAGCT CTGGTAACCG GTTCGACAAA AGGAATAGGG 
AAAGCTATTG CCGCAGAACT AGCACGTGAG GGTGCCGATG TTGTTATCAA CGGACGTAAT
ATAACAGAAG TGAACCAGAT CGTCGAGAAT CTGCAAAATC AATTTCCCGA TGTCTCAATA
ACAGGTGCAG CAGCTGATCT GGCAAAAGAA GCAGAGAGAT TCTTTTTATT TGAACAGGTT
CCCGAGATTG ATATTTTAAT AAACAATATG GGAATATTTC AGCCTATGAA ATACTGGGAT
ATTACAGATG ATATATGGAA TAAATTCTTT GATACAAATG TCCTGTCAGG GAATGCCTTA
GCGAAGTTTT ATATGCCGAA GATGCTGGAA AATAATTTTG GCAGAGTTAT ATTTATAGCA
AGCGAGGAGG CTGTTATGCC GTCCGGAGAA ATGGCGCAGT ACAGTATGAC AAAGACTATG
AATCTGTCAT TGGCAAAAAG TCTTTCCAAG CTTACAAAAG GGACAAATGT TACAGTTAAT
ACAATTATGC CGGGTTCGAC TTTAACAGAA GGAGTAGAGG ATATGATACG AAAAATGTAT
CAAAACAGTA CAATTCCGGA ATCTGAATGG GAGTCTGACT TTATGAAGAA TCACAGACCG
CTTTCTCAGA TTCAGCGCCT TATCCGCCCG GAAGAAATCG GAAGATTTGC AGCGTATATA
TCCAGTCCTT TTGCATCTTC TTTCTCCGGC GCCGCATTAA GGCTAGACGG AGGTTTGGTT
CCTACTATTT TTTAA
 
Protein sequence
MELGLKKKKA LVTGSTKGIG KAIAAELARE GADVVINGRN ITEVNQIVEN LQNQFPDVSI 
TGAAADLAKE AERFFLFEQV PEIDILINNM GIFQPMKYWD ITDDIWNKFF DTNVLSGNAL
AKFYMPKMLE NNFGRVIFIA SEEAVMPSGE MAQYSMTKTM NLSLAKSLSK LTKGTNVTVN
TIMPGSTLTE GVEDMIRKMY QNSTIPESEW ESDFMKNHRP LSQIQRLIRP EEIGRFAAYI
SSPFASSFSG AALRLDGGLV PTIF