Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3437 |
Symbol | |
ID | 8598888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3635426 |
End bp | 3642391 |
Gene Length | 6966 bp |
Protein Length | 2321 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310207 |
Protein GI | 269122030 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA ATAAAAAATT ATTAATATCT TTTTTAGCGT TACATGCAAT AGTGGCATCT TATGGAGAAG CCGCCACTGC CAAGTATGAA AGAATGTACA GCAGTATTAT AAAAAATATA GAACAGGGAA AATCCAACGA AAACAACTAC CGGATAGTCG AACAGGTACT AAAGAAAAGA AATAATGAAT TAAAGGATTT GTATCTGCAG AGTGACTATA TTGTAAAACC TGAATATCTC GAATGGCAGG TATTTTTTAC AGGTCTTTAT ACTGAAAAAA CGAGAGGGGA CAACACTCTT GAAAATGCCC GTTATTATTC AGTTTCCCAG ACTTACAGCG GGAAAAAAAC TTATAACGAG GATGCATATA ATAAATTATA CTCAGACCTT GCTGCCACAG GTCTTTTAAG TGATGTTCAG CTTAGTGCAA TAATGGCGGG ACATTATAAT GTAATAAACA GCCTCGGAGT GAGCGAGCAA AAAGTAATCA GGGAAATGCT TTATTCAGGA CTGGACAGTA TAAATAAAAC TGACGGGTTC AAGATATACA AGCATCCTCA AAATCCAAAA GAAATAGATC TGGGGATTAA CATACCTCCC AAGATAATAA ACAGACAGCC GTTAAATCCG ACACCGGGAA TTCCGGCACC GCCTAATGTA CAGGCACCGT CATTCGTCCC TACTGCACCG CTTACACCGA CAGTTCCTTC ACTTACAATA AAAGCATTTA ATCCGGTAAG TCCTCAGGTA GATACACCGG TACTGGCCGT TGCACCTATT TTTAACATAA AACTCAGTTC TTATTGTAAT AATATGACCT CATGCGGTGT GGGAATAGAC GGAGCTGCTT ATAATCCGGC TATAGGAACA GCACGTTCGT ACAGCGGCGG AGCTATATCA GGTATAGCAG ACGGAACTTC ATCTTTAAGA TATTCATGGA GTGCATATAG TTCTACTTTA TTACGGGCAT ATTTTGATTT GACAGGCGGC GGAGGTATCG TGTCTAATTT TTCCGATAAC CTGACAATTG ATTCAATAAA TCCGCTTAGT GCTGCACAAA AGACTGCTGA AGGCGGCAGA ACATGGAATA CACAGGATTT TCTGGTCGGA GGATCAAGAA TAGCAACTGT AGATAATGTA GGAACCGGTA CGGAACTAAA CAGTACGGGT ACAATAAATC TTGTAGGTCC ATTGGTTGTG GCCTTTGAAA TGCAGACAGA CAGTATCGGG AATGGTACTG TAACATTAAG AAATTCAGGG ACTATAACAG ATTTAGGCGA AACTACATCA ACAGCACTGG ACGGAGTACT TGCCAAAGGA ACACAAACAA GCCTTATAAC TTCACCGTCA GCAGGAAACG AAACTATTAC TGTAAAACGT ACAGCTGAAG GGTATACGGG ATATAAGGTA GGATTGATCT TAACTGCAGA AGATAATACA GCCGGACGTT TTTACAATTT ATTTAATAAT GGGACAATCA CATTTAAAGG AGAAAAATCT ATAGGAATAC AGATTTTTGC ACCTAATTTC GGCAATACGG AAGTGGCAGC AGTAAATACC GGGACTATTA CAATGGGAGG TATAGAAAGT TACGGGATGA AGCTTTCCTC TATTTTAAGA AATACTACAA ACAATGTTTT TGAAAACAGA GGAATAATAA ACATAAACGG AGGAGACGGA GTAGTAGACT CAGTTTCGTC AGGAATGGCA GTATTGGAAG AAAATGCAGC AGGAATAAGA GCATATACCG GTCTGGTAAA AAATACATCA TTAGGGACGA TAAATGTTTC CGGAAGCAGG GGAAATACAG GTATGTACCT GAAAATAAAA GCTCCGGACG ATATAACCAA TGAAGGAATA ATAAATGTTT CAGGAGTGAA AAATGCCGGA ATAAGAGTGG ACTATGGTTC GGTAGGGGCT CTTACAGGAA GTCCCGCAGC TTATAACAAA ACCGGATCAG CTGAAATTAA TGTTACAGGA TCTGAAAACT TTGGAATGAT AGCTGTGGAT AGCAACGGAA CAAACGGTGC CGTGGCAGAA AACAATGCTT TGATTGAAAT AAAAGATAAT GATGCAACTC CCGGCTCATA TATAGAAAAG TCGGTTGGTA TGCTTGCCGT AAAAAGCAAT GAGGCTTTCG GAGGATTTAT AAATAATACG GGAACAATAA AAATAAATAA TGATGTAAAA GCTTCACAGG GAATGGCAAT ACTTGCCGAT GCAAGCGGGG CTAACTCCGG GAATATTCTG ATATCCAAGG TTTCGGCAGC TGATCTAAGC GAAAGCTCTG TTGGTGTTTA TAATGAAGGA ACCTTTAATA TGACAGCAGG TCTTATAGAT GTTTCAGTAA ATAAAGGGAT AGGAGTATAT GCTAAAAATA GTTCGGCAGT TACTACAATT TCCGGAGGAA CCATTAGAGT GGCTGATGGT GCAATAGGAC TTTATGCAGA TGATAAAGGA AATCTGGGAA ATGGTGCAAC AATAAATCTC TCGGGAACTG CAAAGCTGGA AGTAAACAGC AGCGGTCTTA TGTTATATAA TTACTCAGGT ACAAGCGGAA ACCCCGTAGG TAAATTTAAT GTAGGAGCTG TAATACAGGC AGATATAAAT GCAGGAGGTA CAGCTTTTTA CTTCAAAGGA ATACCGTCTG GAATCAATAC CTTCTTAAGC AACATGATAA TAGGTCCGGG ATCATTAAAT ATAAAACTGA CAGATTCCAC TTCAAGTCTT TTTGTTCTTG ACAATCCCGG AGGGGTAATA AACTTGAGTG ATACTACTTC GGCGGGAATA ATTGGGAGTC TGCCTTCCAA TGTTACAATA GATGCTTCAA GTGATCCCAA CTATAAGCCG TATTCTGTAT TTAAAGGCGG ATTAAATATA GATATGGACG TAAATATTGA TAACAGCACA GATGCATATA ACAGATCAGA ATTTTTATCT TCAAAAGTAA CACTGCAGGC TGGAAAAACA ATGACAAGTG TTACAGCAGG CAAATATGCA ATAGGACAGG AGAATTACGC AGGGACTTTG GGAAGAAATG AGATTTCCAT AGTGGTAAAT AACGGCGGTG TCATTAATAT GACAGGTTCC GGTTCGGCAG GAATAATTGC CAATTACGGA GAGATAATAA ATAACGGGCT GATTTCTGCT ACAGGGACAA ATTCTATAGG AATAGTATCT TATAACGGAT CATTTGCACA AAATAACAAT ACAGTGACAG TAGGAGAAGG CGGTACCGGA ATTTACGGAG AAAATAAACG AAATGCCAGC TACGGTAACG CAAAAATAGA GATAGAAAAT AAAGGATTAA TAAATACAAC TGCGACAGCC GGTGCAACAA GCTATGGAAT CTATGCACTA AATAATGATG TTTCATTAAC AAGGGCAGAT TCTACGATTA AATTATTTGC AGGCTCAGAA ATAAATATGT CGGCTCAGGA CGGCGGCGTG GGAGTTAGTG CATTTAAATC TACACTGACA AATGACGGAA AAATAACTGT GGGGAAAAAT GGTATAGCAG TATATGCAGA TGACTCTGAA ATAAATATAA ACAGCGGGGA AATAAATCTG AACGGAGATA ATGCAGTAGG TTTTTATCTT ACAAACAGCC AGTTTAACGG AAATTCAGGG ACAATAAATA TAACCGGAAA AAATGTCGTA CTGTTTAATC TTGTAAATTC ATCATTTACA AATAATCTGG CAGTAAATGC TGCTCCGGGT TCTACATACG TAGTAGGAAA TCTTTCAAAT GCAGTCTATA CTCATTCAGG GACAAATACA CTGCTTTCAA ACAGTGTTCT TCTAAATGGA AATAATTCGG CAATGCTGAT AGACAGTACT TCAAATATTA GCTCTTCTTC CACAGGAGTC GTAGTAATGC TTCTGGACGG AAGATACGGA CTGCCCTTTC CTGCGGGCTA CTCAGCAGAT GGAGAAAATG CAGGAACGAT AGTATTAGGA AATGATTCAG CGGCTGTCTA CGGTAAAAAT GGAACAAGGC TGAAAAACAG CGGAAATATT ACACTTGGAT CAAATTCCGT AGGAGTTTAT AACGTCGGAG TTAATTCTGA AACGGAAAAT ATCGGGATAA TAACTTTAGG TAATAATTCT ACAGGACTTT ATCAGAATAA TGGAACAAAC ATTATAAATA ACGGTACTAT AAACGGAACA GGAACAGGTG CTGTAGGAAT GTATACCGAT AGTAATACAG GGATAATTAA TAATACAGCT CTGATAGATC TGCAGGGCGA TAAATCAATA GGAATTTATG CAATGGGCAG CACACAGAAT ATTATTAACT CAGGAACTAT AAAACTGGGG AATTCTTCTC TGATGAACGA TCCAAGTATA GGAATATACA CTAATAATAT AACTGATACA ATTATTAATA CAGGAAACAT AGAAGCTGGT TCAAGATCAC TCGGTATTTA CAGTCTGGGA ACTCAGGTCG ACCATGTATC CGGAACTATA AAGGCGGGTA GTGAGGGAAC AGGAATATAT AAGGATACAG GATTATTAAG AATTCATTCA GGTGCAGTAA TAGAAGCGCT TGCCGGAGAA GCAGCCGGAT TATACGGTAT AAACGGAGCC GGAATTACTG CGGACAGCGG GGCAATATTT AATATAGGTT ACGGAAGCTA TGGAATAATT GCGGAATCGG GGGCTACTCT TCTGAATTCG GCAGCAATAA CTTTAGGAGA CAACAGTATA TTTACTTACG GAAATAATTC AGGCGGAATA GTAAATAACG GTGCTGTAAA TATTACCGGT TCAGATAATA CAGTCTTTTA TATGGTAAAA GGCGGAAGTA TAATAAATAA TGCCAATATT ACAGGTACTG CGGGAACCGG AAATATAGGT ATTTATAACA GAGGCGTTTA TACTACAGAA GTACTTCAGG CAGACGGAAC TATGAAGCTG GAAGGGCTTA TAACTGAAGG GTATATAGAA AATAACGCAG ATATAACCTT GGGAGATTCA TTTCTTGTTA CTGATGCATA CGGTGTAAAA ACGGGATATT CGGTTGGTAT GTACGGTGAA GGATCAAGCG TGGTTAATAA TGGAGGAAGA ACTATAACTG TAGGAAAAGA GGGCGTGGGT ATATTTGCCA GTGATGCGGG AACTACCTCA TATAACTACG GGAATATAAT AGGTAATGGA GACAGAGCAA TAGGAATGTT TGCTGATAAT ACAAGAATAG AGAACCACGG ACTGATACAG ATGACAGGAG ACGGAGTTAT AGGTATGGCG GGAAGAAACG GAGCATATAT CTATAATGCG TCTACAGGTG TGATACAGGT AACAGGAAAA GACGTAACCG GGATTTATCT GTCGGGAGCA GCAACAAAGG TAGAAAATAA AGGTCATATC ATAATTACCA ATACAGGAGA TCCGTCAGAT GATACAGGGG TCGGAATAAG ATATACATCT GATTTTGATG AAGCAACAGG TTTGGTAGGC GGACTGGGAA ATATTACAGG TACAGGATAC ATAAATAACG GATATACAAC AGCGGGATAT TCGCTGCCTG AATTACCTAC CCTTATAAAT TCTGGAGAAA TTACCATAGA TGTAGGAAAT AAATTTTCTT ATGATTCAAT GCGTGTAATC GTAAAATTAG ATCCTTCCAC AAATGAAGCT ACAACGAATT TTACTGATAA AATAGGATTT TCAGGTACTA CAATTCCGGA AAAACTGGAA ATAGCCGCTG ATTTCTCACA GGGAACATCA TCTGACAGAT ATGTATTTAA AAATATATTC AGAGGAATGG ACGGAACGGG AGAATATATC AGCCAGTCGC TTACATGGGA TGCAACAGGT CAGGGAATGG ATATAGTAAT GACAAGAATA GCGTATACTA AATTTACTGA CGGATTATGG TATGAGGATT TTGGAAAAGT ATTAAATGAA AAATATGCTA ACCAGACAGG AGATGCTCTG AAAATATACG ACAAAATTGA TATGATACAG ACAGAACCTA ATTTCAGACA CTCAATGGCC AGTCTTGCAG GAAATGTATA TGCTAACCTG AACCAGAGAG AAGAGGATAT GGCAAGAGTT TTGGAAAATT CACTGCATAT GCTCCAGAAT TCTGAAAATA ATACAAAAGA AAATATAAAG ATAAATGTAA TTGCTGTAAA AGGTAAAACA GAAGAGGATA CTGACGGGGT TGTGCCGTAT AAATATACTG CGACGGGAGC AATTGCACTA AGAGAAGTAG AACGTACATA CAGACACACA TTCGGATATT CACTCGGATA TCTTCATACA GGCTTTGAAT TCGAAGATCA TAATGACAGT GAGGAATGGG TAGATACAAT ACAATTAGGA TTACATAATA AATATACGCT GAACGGATGG AAGCTGATGA ATGATCTTAC AGGAAGAGTA AGCTTTCATA ATGTAGACAG AAATATAGAC TGGCCTGACC AGACATCCGG TGTGGAACGA TCTGAAATGA ACGGAAATTT TGAAACATAT TCTATTACTT CGGATAATAT TTTAGGAAAA GAAATAGCAC TTGGGAAAAG AGCAAGCATA ATGCCTTATG GCGCATTCAG AGCAATGTAT GTAACAAGAC CTTCATTTGA AGAAAGCGGT CTTGAGCGTC TGCAGGTAGA CGGAAATGAC GCATGGAGTG CAAAACCAAG AGCGGGAATA GAATTAAAGG CTTCATTGCC GTTAGGACCA AAAACTGCAT GGGAGCTAAA AGGAAGCCTT GATGCAGCAT ATGAATATGA GCTTGCAAAT CTGAACGAAA GAGAAAAAGC AAGACTCATA GCTATAGAAG ACGGATATCA TAACTTATCA AAACCGGAAG ATGAAAAAGG TTCGTTAAGA ACGAGAGCTT CAATAGGAGT AGAAGTAGTC GACCGTTACG GAATATTCTT AACAGGAGAA TATCTGATAG GAAATGATGA TCAGGAAGAA TACAGGGCAG GATTAACATT AAAGGCAGTA TTTTAA
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Protein sequence | MKRNKKLLIS FLALHAIVAS YGEAATAKYE RMYSSIIKNI EQGKSNENNY RIVEQVLKKR NNELKDLYLQ SDYIVKPEYL EWQVFFTGLY TEKTRGDNTL ENARYYSVSQ TYSGKKTYNE DAYNKLYSDL AATGLLSDVQ LSAIMAGHYN VINSLGVSEQ KVIREMLYSG LDSINKTDGF KIYKHPQNPK EIDLGINIPP KIINRQPLNP TPGIPAPPNV QAPSFVPTAP LTPTVPSLTI KAFNPVSPQV DTPVLAVAPI FNIKLSSYCN NMTSCGVGID GAAYNPAIGT ARSYSGGAIS GIADGTSSLR YSWSAYSSTL LRAYFDLTGG GGIVSNFSDN LTIDSINPLS AAQKTAEGGR TWNTQDFLVG GSRIATVDNV GTGTELNSTG TINLVGPLVV AFEMQTDSIG NGTVTLRNSG TITDLGETTS TALDGVLAKG TQTSLITSPS AGNETITVKR TAEGYTGYKV GLILTAEDNT AGRFYNLFNN GTITFKGEKS IGIQIFAPNF GNTEVAAVNT GTITMGGIES YGMKLSSILR NTTNNVFENR GIININGGDG VVDSVSSGMA VLEENAAGIR AYTGLVKNTS LGTINVSGSR GNTGMYLKIK APDDITNEGI INVSGVKNAG IRVDYGSVGA LTGSPAAYNK TGSAEINVTG SENFGMIAVD SNGTNGAVAE NNALIEIKDN DATPGSYIEK SVGMLAVKSN EAFGGFINNT GTIKINNDVK ASQGMAILAD ASGANSGNIL ISKVSAADLS ESSVGVYNEG TFNMTAGLID VSVNKGIGVY AKNSSAVTTI SGGTIRVADG AIGLYADDKG NLGNGATINL SGTAKLEVNS SGLMLYNYSG TSGNPVGKFN VGAVIQADIN AGGTAFYFKG IPSGINTFLS NMIIGPGSLN IKLTDSTSSL FVLDNPGGVI NLSDTTSAGI IGSLPSNVTI DASSDPNYKP YSVFKGGLNI DMDVNIDNST DAYNRSEFLS SKVTLQAGKT MTSVTAGKYA IGQENYAGTL GRNEISIVVN NGGVINMTGS GSAGIIANYG EIINNGLISA TGTNSIGIVS YNGSFAQNNN TVTVGEGGTG IYGENKRNAS YGNAKIEIEN KGLINTTATA GATSYGIYAL NNDVSLTRAD STIKLFAGSE INMSAQDGGV GVSAFKSTLT NDGKITVGKN GIAVYADDSE ININSGEINL NGDNAVGFYL TNSQFNGNSG TINITGKNVV LFNLVNSSFT NNLAVNAAPG STYVVGNLSN AVYTHSGTNT LLSNSVLLNG NNSAMLIDST SNISSSSTGV VVMLLDGRYG LPFPAGYSAD GENAGTIVLG NDSAAVYGKN GTRLKNSGNI TLGSNSVGVY NVGVNSETEN IGIITLGNNS TGLYQNNGTN IINNGTINGT GTGAVGMYTD SNTGIINNTA LIDLQGDKSI GIYAMGSTQN IINSGTIKLG NSSLMNDPSI GIYTNNITDT IINTGNIEAG SRSLGIYSLG TQVDHVSGTI KAGSEGTGIY KDTGLLRIHS GAVIEALAGE AAGLYGINGA GITADSGAIF NIGYGSYGII AESGATLLNS AAITLGDNSI FTYGNNSGGI VNNGAVNITG SDNTVFYMVK GGSIINNANI TGTAGTGNIG IYNRGVYTTE VLQADGTMKL EGLITEGYIE NNADITLGDS FLVTDAYGVK TGYSVGMYGE GSSVVNNGGR TITVGKEGVG IFASDAGTTS YNYGNIIGNG DRAIGMFADN TRIENHGLIQ MTGDGVIGMA GRNGAYIYNA STGVIQVTGK DVTGIYLSGA ATKVENKGHI IITNTGDPSD DTGVGIRYTS DFDEATGLVG GLGNITGTGY INNGYTTAGY SLPELPTLIN SGEITIDVGN KFSYDSMRVI VKLDPSTNEA TTNFTDKIGF SGTTIPEKLE IAADFSQGTS SDRYVFKNIF RGMDGTGEYI SQSLTWDATG QGMDIVMTRI AYTKFTDGLW YEDFGKVLNE KYANQTGDAL KIYDKIDMIQ TEPNFRHSMA SLAGNVYANL NQREEDMARV LENSLHMLQN SENNTKENIK INVIAVKGKT EEDTDGVVPY KYTATGAIAL REVERTYRHT FGYSLGYLHT GFEFEDHNDS EEWVDTIQLG LHNKYTLNGW KLMNDLTGRV SFHNVDRNID WPDQTSGVER SEMNGNFETY SITSDNILGK EIALGKRASI MPYGAFRAMY VTRPSFEESG LERLQVDGND AWSAKPRAGI ELKASLPLGP KTAWELKGSL DAAYEYELAN LNEREKARLI AIEDGYHNLS KPEDEKGSLR TRASIGVEVV DRYGIFLTGE YLIGNDDQEE YRAGLTLKAV F
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