Gene Sterm_3436 details

Gene Information

• Locus tag: Sterm_3436
• ID: 8598887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3628396
• End bp: 3634740
• Gene Length: 6345 bp
• Protein Length: 2114 aa
• Translation table: 11
• GC content: 37%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003310206
• Protein GI: 269122029

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.292491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAACA AGAATAAATT GTTATTATTT TTAGCATTGA ATGCAGCGTC GTCTTTTGTA 
AGTGCAAAAG AAATAGGCTA TGATAAAATG TATGATAAAA TAACAAAAAA TATTACAACT 
GGAAAATCAA ATAATGATTC ATATAAACTA ATAGAGCGAA TACTCGTTCA GAGAAACAGA 
GAATTAAAAG ACTTATATGC ACAGGGAGAC TACATAGTAA AGCCCGAATA TTTAGAATGG 
CAGATTTTTG CAACAGGCTT TTATGCTGAA AGAGGGAATG GAGATAATAC AAGCGGGAAT 
GCAAGATATA ATTCAAAGAC TGAAGGATAC TTTGATGAAA ACGGAAAATA TGTGTCATCA 
TCTTCAGGGA AGCCGTATAA AGATAAACAG GAACCTAAAA CAATAGAATT AGGGATAAGT 
ATACCGTTAA AAGGAATAAA CAGAGAGGGA CTGCAGGTAA ATATAAATCC AAATGTAACT 
AAGCCGTTAA TTTCAGCTAT ACAGGGAATG AATCCGGTAA ATTCATTAGA TGTTCCTGTA 
TTGGAATTAT TCGAGTTTAA TCCGCTAAAG CCTGAAATAA TTCCGCTGAC TCCGGCTGCA 
GTATCTATAA CACCTCCTAA TCTGGCTGTA TATAATCACG GACAACCGGA TCTGGTATAT 
GGAAGAGATA CTAATCTGCC TGCCGGTACA TATAAAACAA GCGATCCTCT TAACCTAATC 
AGCGGGGATG GAGTAGTAGA TGCTATTATA GATTATAGCG GTGCCAGCGG AGTCAGAACT 
TCAGACGCAG CTTCAACAAT GATAGTTGAT ATAGCCGGAA AAAAAGCAGT TTCAATAGAT 
GGAAGTACAG TAGATTTTTA TGGTAACGGT ACAATGGAAT TAAATGCAAT AAATACTGCC 
GGAATAGCTA TGGAGAGTAA TCCGAGCAGC AGCCCGAAGG CTACAAATGT CGGAACAATT 
AATGGAAATA ATAATAGTCA GGCAGCATTA ATTTTTATAA ATGAACAATC TTATAGTGCT 
GATTCATATG CTTTGACAAA TAATGGAACT GTAATCATGA ATGGGAATAG TTCACTGGGA 
ATGGCAATAA ACAGTGCAGC AGGAGGCCAT TTAGTAACTG CTGTAAATAA TAAAAATATT 
ACAATGAACG GAAGCGGAAG TTATGGTTTG GTTATAATGG CCGGATCAAA TCTAAGAGCT 
GGTTCGTTAA TCGAAAATTC TTCAACAGGT AATATAACTA TAAAAGAAGA AAATTCCGGC 
GGTTTAGTTG TTTTATCAGG AGGGGTAAAT GCTAAAAATG ACGGAGTGAT TGATTTAACT 
TCAACTGCTA AAAATTCGTT TGGTATTTAT GCTACTTCGG CTAATACAAA TGCGATAGCA 
AATAATGGAA ACATTAATAT TGCAGGAGAA AATTCCATAG GTTTGAGATC AGAAGGCGGA 
ACTTTAGTTA GTGGTACAAA TGGTGTAGTA GATATTACAG GCGGTTCAGG AAATATCGGG 
ATGTATGCTT CCAGTGGGAG TGTTACAAAT AACGGAGAAA TAAAAATAAC AGGCGGAACT 
CAGAATAAAG CTTTCTTTAT TACAGGTGCA GGAAGTACAG GGACAAGTAC TAATAAGGTG 
GATATTAATG CAGATGAGTC ATATGGTGTA ATAGTAACAA ACGGAGGACA ATACACAGGG 
AGCGGGACAT TCTCGATTTC AGGAGATAAC TCATATGGAT TTGTAGCCAA AGGCGGTACT 
ATAAATGGTG GAAGTTCGCT TACCGCTGAT CTTACAGGAG AAAAATCGGT GGCTGTTTAT 
GCAGGAGACA GTACTACTGC AAGTTTAGTT ACACTAACAG GCGGAACAAT TAATGTCAAG 
GACGGCGGAG TTAACTTTGG AGCCGGACAG AACGGTACTC TTAATTTAAA TAATATGAAT 
TTTACTGTTG GAAGTCAGAG TTTAGGATTT TTTACACAGG ACAACGGAAA TATAATTATT 
CAAAATTCAA CAGGAACAAT TAAAGGCGGA ACTACATCAG CAGACAGAGG AACTGCATTT 
TCAGTAAAAG GAAGCGGTAT AGGAGTAACA GAAGTAAATT CAATAGCTGA TTTGAGTACA 
TTGTTAACGG CCTCGGGGAT AAATCCTACC AATTTGACGT TAACTATGGA GTCAGATTCA 
AGATTATTGT CACTCTCTGA AGCTTCAGTA AAATTAAGTG TAATAAGCAG TATAAATTCG 
TCTCCTATTT CATTGCCAGG AGTAACAATA AACGGGAATG ACTATAAGAC AATGCTGGTA 
TATAAGGGTC TTTTGAATAT AGATGAAGAA GTCAATTTAG ATGATCCTAT GTCTGATTAT 
TCCAGAGTTG AGATGGCAAA CAGTACCATA TTAAACAACA ATGTAATAAA AGGAGCGGGC 
AATTCACAGC AGGGAATGGC ACAGGCAAAT GGTGTCGGTC TGCCAAAATC AGTTGTAACA 
TTGACAAATA ACGGAACAAT TAATCTTGGA GGACAGGAAT CTGTGGGAAT TTATGCAGAT 
TACGGAATCA TAAATAATAA TAATACAATA GATACACAAG GAAATAAATC TTTTGGAATA 
TTCGGAGTAA ACGGAACAGA AATAACAACT GCTGCAGGAA GTACAATAAA AGCAGGAAAC 
AACGGAGCCG GAATAGTAGC ACAGAGCTAT ATTATAGATA AGCTGACAGG TTTAATAGTA 
AGTAACGGTT ACGGAGACGG AACATTTGAG GTAGATCACA GCGGTGTAAT TACTATGTTA 
GGGACTGACT CATTCGGAAT TTTTGCAGAT AATAATGATA CAAATTCTTT GACTAATATA 
GCAGCTAGAA AAGTAACATT AAATGCCGGT TCGATGATAG ATATGAGCGG AACAGCATCA 
AAAGGAACAG CACTATATAT AAATAAAGGA ACTTTGACTA CTTCCGGAGA CATGAAAGTA 
GGAAATGAAG GTGTGGGAAT CTATGCCAAT GACAGTAATG TATCTCTAAA CGGAGGAACA 
ATAGATATTA TCGGCTCAGA TTCTACGGGA ATATATCTGG ACGGAACTAC AACATTAACT 
GCAACAGGCG GTACAATAAA TGTAAAAGGC GATAATGCAA CAGTGTTTTT CGTAAATTCA 
CTGGCAACAG CAGCAGGACT GGATAATGTA ACGGTAAATG CGGATCCGGG TCTGAAAATA 
ACACTGGCTA ATGTAAAAAA TAATAATTTT ACATATAACG GAGCATTAAA TAATGCAGGA 
AAAGATTCAG TATTAATAGC AGGAGATAAT TCAACGATAG TATTTGGTAC AGGAGCTGTA 
ATAAATTCTA CATCAGAGAA TGTCGCAGGA ATGTCAGCCA AAGGCGGAAG TGCTGTAAAT 
AAAGGCACAC TGACTTTAAC AGGAACGAAT TCAATAGGAA TCTATGCTGA AAATGCCGGC 
TCATCAAATG AAGGAAATAT AATTCTGGGA TCAAGCGGAG TAGGTATATA TAATGAGAAC 
GGAACAGCAA GTAATATATC CGGTAAAATA GAAATGGGTA ATAACGGGGT AGGAATATTT 
GGTTCTGACT CTGCAGCTAT AAATAATGAT GCATTGATAA GCAGTATCGG AAATTCGGCA 
ATAGGTATCT ATGCAGATGG AAATACAGCA GGAACAACAA TAACAAATGA TTATTTAGGG 
AAGATAGATA TATCAGGAGA AAATGCAATA GGAATTTATA CTGCAGGGAC AACAGCAAAA 
ACTGTGATAA ATAACGGAGA AATAAAAGTA GGAAATTCAT CTGATGCAAG TAATCCAAGT 
ATAGGAATAT ATAATAATAT TTTAGGAAGT ACAATCCAAA ATAATGGTGT TCTGACTTTA 
GGAACGAATT CCCTCGGAAT ATTTGATAAA GGCGGATCAG TAACAGAAAA TGGTACATTA 
AATGTAGGAA GCATGGGTAC CGGAATACTC TCAGAAAACG GAACTGTTAA TATAACAACA 
TCTTCGGTAA TGAATATAAC CGGAACAGAT GCAATAGGAG TTTATGGGAA AAATAATGCA 
GCTGTAACAA ATGCTTCATC TGGAATAACA TTAGGCGATG GAAGTTACGG ATTTGTACTG 
GAAACAGGAT CTGGTCTCAC AAATACAGGA TCAATAACAT TGGGAGACAG CAGTATCTTT 
GTTTACGGAA ACGGAGCAGG AATAATAACA AGCTCAAATA CAGCATCAAT AACAGCTTCA 
GGATCTGAAA ATGTAGTATT TTATACTGTA AACGGCGGAA CAATAAAGAA TGATTCATCA 
ATAACAGCTG ATACAGGAAT AGGAAATATA GGTATTTATA ATAACGGAGG AAGCATAGAA 
AACAATGGTA ATATTTCATT GGGAGATTCA CTGCTGTTTA AAAATAACGG AGTAATAGAC 
CCTGATCAGA GTAAATATTC CGTGGGAATA TATGCTGAAG GCTCGACGGT ATTAAATACA 
GGGAATATAT CTTTAGGAGC AGATGCAGTA GGAATATATG TGAAAGATAA TACAGTCATG 
GCTGTGAATC ATGGGAATAT AACTGCCGGA ACTTCATCAG CACCAAAGGC CGGAGCAATA 
GGAATATTCG CAGAGGGCGG AGCAGGAATA GAAAACTTCG GGAATATAAC ATTATATGGT 
GATAATTCTA TAGGTATTGC CGGAAAAAAT GCCGCAAATA TCATAAATCA CGGAATAATA 
ACTGTATCAG GAAATGAAGC AGTGGGAATT TACGGAACTT TGAATACATC AGTAGAGAAT 
AAAGGAACAA TAAATATATC AGGTACTGAC AGTGTTGGAA TAATGGCTCC AAACGGGAAG 
ATAATAAATG AAGGAACTAT TAATTATACT AACGGAGCCT TTGCAGTAAA AGAGCAGGAC 
AGCTATCCTC TCCCAGAGCT TGTAAATATG GGGTTAATTA CAGTTGACGG TCATTTTAGC 
AATGAGGGAA TGGAGATATC ATTAAAGCCG GATTTGAATA CACTTGCTCC ATCGACACAG 
CCTGATGTAG ATTTTGTACT AAACAGCGGA ACAATATCTG CAAATAGTAT GACAATAACA 
GATACGGTAA AAATACTTCC TGATTTTTCA CAGGGAACAA ATGCTAATGT TTATAAACTG 
GAAAATGTAT TCATGACAAG CACGGGACAG ATCATTTCTT CTAACGGGAA GATACCGATG 
GTAAGTAAAT CACTGACATG GGAAGCAACG CCGAAAGTAA ATGATGACGG AAATGTGGAT 
ATTTATATGC ATAAATTAGC TTATAAGGAT TTTTCGGACG GACTGTGGTA TGAGGAGTTT 
GCACAGGCAC TGGATGAAAA ATATGCAGGT TCAGCGGGAG AAGCCGGAAG TATATTTGAT 
AAAATTGACT TGATAGAGGA AGAAAGCGAT TTTAGACATG TAATGGCAAG TCTTGCAGGG 
AATGTTTATG CTAATATGAA TCAGAGAACA GATGATATAG CAAGAGCTTT TGACAGTTCA 
TTAATGTTAA TGGAAAATTC AAAAAACAAT ACAAAAGAAA ATGTGAAAAT AAATGTAATA 
GCGGGCAGAG GAAGAACAAA AGAAGATACA GACGGAGTAG TCGGCTATGA TTATACAACA 
ACAGGAGTTC TGGCATTAAG AGAAGTAGAA AGAACTTACA GACATACATT CGGATATTCA 
CTTGGATATC TGCATACAGG TTTTGAATTT AAAGACGGAA ATGAAAGTGA AGAATGGGTA 
AATACAGTTC AGCTGGGATT ACACAATAAA TATGATGCCA ATGACTGGAT TTTGAAAAAT 
AACTTAATCG GAAGAGTGAG CATACATAAT ATAGACAGAA ACATAGACTG GCCTTCGCCT 
ACAGGAAGAT CAGAAATGAA CGGAACATAT GAAACATATT CATTATCTTC TGATAATACA 
TTCGGAAAAG AGCTGGCTTT AGGAAAAAAT ACAAGTCTGA CACCATATGG AGGAATAAAA 
GCAACATATA TTACAAGACC AACATTTAGT GAAAGCGGTC TGGAATCATT ACAGGTAGAA 
GGAAATGATG CATGGAGTGT AAAACCCAGA GCAGGTATTG AGCTGAAAGG ATCACTGCCT 
TTAGGTTCTG CAGGCGGATG GCAGGTGAAA GGAGCTTTGG ATCTGGCATA TGAGTATGAA 
CTGGCAGATC TGAACGAAAG AGAAAGTGCA AGATTAACAA AGATAGAAAG TAATTATCAT 
GATTTATCAA AGCCTGAGGA TGAAAAAGGT ATGTTCAGAA CAAGAGCAGT ATTTGGAATA 
GAAGCAGAGG ACAGATACGG TATATTTATG ACAGGGGAAT ATGGTATAGG AAATAGTGAA 
AAAGATGAAT ACAGAGTAGG AGTAACATTA AAAGCAGTAT TTTAA 

 

Protein sequence

MKNKNKLLLF LALNAASSFV SAKEIGYDKM YDKITKNITT GKSNNDSYKL IERILVQRNR 
ELKDLYAQGD YIVKPEYLEW QIFATGFYAE RGNGDNTSGN ARYNSKTEGY FDENGKYVSS 
SSGKPYKDKQ EPKTIELGIS IPLKGINREG LQVNINPNVT KPLISAIQGM NPVNSLDVPV 
LELFEFNPLK PEIIPLTPAA VSITPPNLAV YNHGQPDLVY GRDTNLPAGT YKTSDPLNLI 
SGDGVVDAII DYSGASGVRT SDAASTMIVD IAGKKAVSID GSTVDFYGNG TMELNAINTA 
GIAMESNPSS SPKATNVGTI NGNNNSQAAL IFINEQSYSA DSYALTNNGT VIMNGNSSLG 
MAINSAAGGH LVTAVNNKNI TMNGSGSYGL VIMAGSNLRA GSLIENSSTG NITIKEENSG 
GLVVLSGGVN AKNDGVIDLT STAKNSFGIY ATSANTNAIA NNGNINIAGE NSIGLRSEGG 
TLVSGTNGVV DITGGSGNIG MYASSGSVTN NGEIKITGGT QNKAFFITGA GSTGTSTNKV 
DINADESYGV IVTNGGQYTG SGTFSISGDN SYGFVAKGGT INGGSSLTAD LTGEKSVAVY 
AGDSTTASLV TLTGGTINVK DGGVNFGAGQ NGTLNLNNMN FTVGSQSLGF FTQDNGNIII 
QNSTGTIKGG TTSADRGTAF SVKGSGIGVT EVNSIADLST LLTASGINPT NLTLTMESDS 
RLLSLSEASV KLSVISSINS SPISLPGVTI NGNDYKTMLV YKGLLNIDEE VNLDDPMSDY 
SRVEMANSTI LNNNVIKGAG NSQQGMAQAN GVGLPKSVVT LTNNGTINLG GQESVGIYAD 
YGIINNNNTI DTQGNKSFGI FGVNGTEITT AAGSTIKAGN NGAGIVAQSY IIDKLTGLIV 
SNGYGDGTFE VDHSGVITML GTDSFGIFAD NNDTNSLTNI AARKVTLNAG SMIDMSGTAS 
KGTALYINKG TLTTSGDMKV GNEGVGIYAN DSNVSLNGGT IDIIGSDSTG IYLDGTTTLT 
ATGGTINVKG DNATVFFVNS LATAAGLDNV TVNADPGLKI TLANVKNNNF TYNGALNNAG 
KDSVLIAGDN STIVFGTGAV INSTSENVAG MSAKGGSAVN KGTLTLTGTN SIGIYAENAG 
SSNEGNIILG SSGVGIYNEN GTASNISGKI EMGNNGVGIF GSDSAAINND ALISSIGNSA 
IGIYADGNTA GTTITNDYLG KIDISGENAI GIYTAGTTAK TVINNGEIKV GNSSDASNPS 
IGIYNNILGS TIQNNGVLTL GTNSLGIFDK GGSVTENGTL NVGSMGTGIL SENGTVNITT 
SSVMNITGTD AIGVYGKNNA AVTNASSGIT LGDGSYGFVL ETGSGLTNTG SITLGDSSIF 
VYGNGAGIIT SSNTASITAS GSENVVFYTV NGGTIKNDSS ITADTGIGNI GIYNNGGSIE 
NNGNISLGDS LLFKNNGVID PDQSKYSVGI YAEGSTVLNT GNISLGADAV GIYVKDNTVM 
AVNHGNITAG TSSAPKAGAI GIFAEGGAGI ENFGNITLYG DNSIGIAGKN AANIINHGII 
TVSGNEAVGI YGTLNTSVEN KGTINISGTD SVGIMAPNGK IINEGTINYT NGAFAVKEQD 
SYPLPELVNM GLITVDGHFS NEGMEISLKP DLNTLAPSTQ PDVDFVLNSG TISANSMTIT 
DTVKILPDFS QGTNANVYKL ENVFMTSTGQ IISSNGKIPM VSKSLTWEAT PKVNDDGNVD 
IYMHKLAYKD FSDGLWYEEF AQALDEKYAG SAGEAGSIFD KIDLIEEESD FRHVMASLAG 
NVYANMNQRT DDIARAFDSS LMLMENSKNN TKENVKINVI AGRGRTKEDT DGVVGYDYTT 
TGVLALREVE RTYRHTFGYS LGYLHTGFEF KDGNESEEWV NTVQLGLHNK YDANDWILKN 
NLIGRVSIHN IDRNIDWPSP TGRSEMNGTY ETYSLSSDNT FGKELALGKN TSLTPYGGIK 
ATYITRPTFS ESGLESLQVE GNDAWSVKPR AGIELKGSLP LGSAGGWQVK GALDLAYEYE 
LADLNERESA RLTKIESNYH DLSKPEDEKG MFRTRAVFGI EAEDRYGIFM TGEYGIGNSE 
KDEYRVGVTL KAVF