Gene Sterm_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3417 
Symbol 
ID8598868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3609117 
End bp3609935 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content38% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003310187 
Protein GI269122010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA GGAGAAAAGG AATAATTTTG ACTGTTCCGT ATATTGTACT GTCATTGTTT 
TTTCTGATTC TGCCATTAGT CGGTCTTATA TTTAAGAGCT TTAGTCAGGG ACTGGGTTCA
TGGATAAGAG TATTGTCAAA TCCTTTGTAT ATAGAGGGAT TAAAGAACAG CATGATATTG
TCAGTCTGGG TAACGGCAGA GTCCGCGGCG GCAGGAAGTA TAATAGCGGT ATTATGGTAT
AAAAGGCTGG CAAAGCACAG CTGGTTCCTT TCATTTTTGA ATTATTCCGC AAATAACGGC
GGGATAGGGC TTGCCTTTGC ATTACTCGCT ACACTGGGGA CAAATGGATT TTTGACAATT
ATTCTGAGAA GGATAGGGAT TCGCATATAT CCAAATTTTG ATATAGTCTC ATTAACAGGA
ATTCACTTTG CATATCTGAG TTTTTTAGTA CCGTATATGA CAATTTTATT TCTTCCGGCA
GTGGGTTCCT TAAAGCCGGA ATGGTGGAGT GCAGCATGTA CTCTGGGAGC CGGAAAGAAA
AGATATATAC TGAAAATAGC CGGACCTGTT CTTTTTCCGT CTTTTATGGC ATCTACAACA
CTGGTATTTC TTACATCTCT GGGAACATAT GCTACAGCAC AGGCTATTTC TTCAGACAGA
ATAAATCTGA TAACCATACA GATAGGATAT CTGATGCAGA TGTCGCTGTT CAGGCAGGTA
GATGCCTATA CGATTTCAAT ACTTTTATTT CTCATAATGA TGATATTTAT AGTTATATAT
AAAAAAACAA ATGAAAAAGC CGGCAGGTGG TTAAGATAA
 
Protein sequence
MNKRRKGIIL TVPYIVLSLF FLILPLVGLI FKSFSQGLGS WIRVLSNPLY IEGLKNSMIL 
SVWVTAESAA AGSIIAVLWY KRLAKHSWFL SFLNYSANNG GIGLAFALLA TLGTNGFLTI
ILRRIGIRIY PNFDIVSLTG IHFAYLSFLV PYMTILFLPA VGSLKPEWWS AACTLGAGKK
RYILKIAGPV LFPSFMASTT LVFLTSLGTY ATAQAISSDR INLITIQIGY LMQMSLFRQV
DAYTISILLF LIMMIFIVIY KKTNEKAGRW LR