Gene Sterm_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3416 
Symbol 
ID8598867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3608254 
End bp3609117 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content36% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003310186 
Protein GI269122009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.21064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATG AAAATTATAT GGAAATTACA CTGGATAATT CTGAAGTAAA AAAATGGAAA 
TTAAGTGTAA AGACAAACTA TGAAAAGATT TTATTTTATA TTGTGACAGG TTTATTTTTA
ATCTATACAA TATTTCCTGT AATATCAGTA GTACTGTTTT CAGTTTCGGG AAAATGGAAT
ATGACATTGC TTCCGGAAGT ATGGTCGCTT AATGCATACA GGGAGTTATT CATGAATTCT
CTGTTTTGGT CATCATTCGC CCGAAGCTTT CTGGTCTCAT TTCTTGTAGT TTTAATGGAT
ATTCTGATAA TAACAGCAGC TTTATTAGGT GTGGAGCTTT CCGGAAATAA AAAAATGATG
ACGCTGCTGG AAACAATTTC TATAATACCG GTAGCTCTTC CTGGAGTGGT TCTGGCCTTA
TCCACGGTAA CATTTTATGG AGAGGCTTTC CCGCTTTTGC TGGGAAGTCC GGTACTGCTG
ATTTTCAGTG AAGCTGTTTT TGCTTTTCCG TTTATGCTCT GGTCTTTGAA AAATACTTTT
ATGAGTATTA ATGCCGGAGT TCTTTATGAC GCTTCATGTA CACTGGGAGT ACCCACATGG
AAATTTATTC TGAAAATACT GGTTCCTTCT TTGAAAAAAG GAATGCTTAC AGGAGGAATT
ATGGTGTTTA CCACTACATT TAATAATTTT GCTCTGGCAC AGCTGATAGT AGGATCAGGC
TGGGAAACAT ATCAGGTATT TCTGAATAAA TTAATGAGAA TCGACGGTCA TATGGCAAGT
GCCATGGTTC TTACAGGTAC TGCAATGACA TTTATACTTG TGGCAGTATG CTCACTTACA
GGAAAGATAT TAAAAAATCA GTGA
 
Protein sequence
MENENYMEIT LDNSEVKKWK LSVKTNYEKI LFYIVTGLFL IYTIFPVISV VLFSVSGKWN 
MTLLPEVWSL NAYRELFMNS LFWSSFARSF LVSFLVVLMD ILIITAALLG VELSGNKKMM
TLLETISIIP VALPGVVLAL STVTFYGEAF PLLLGSPVLL IFSEAVFAFP FMLWSLKNTF
MSINAGVLYD ASCTLGVPTW KFILKILVPS LKKGMLTGGI MVFTTTFNNF ALAQLIVGSG
WETYQVFLNK LMRIDGHMAS AMVLTGTAMT FILVAVCSLT GKILKNQ