| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3388 |
|---|
| Symbol | |
|---|
| ID | 8598839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3573898 |
|---|
| End bp | 3574644 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003310158 |
|---|
| Protein GI | 269121981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000207946 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC AAAGAATAGA GGTGATATTA AGCAAGGTAA AGGAAAAAGG TATAGTATCG
ACTCTGGAAT TAACAGAAGA ACTGAATGTA ACTGAAATGA CAATAAGGCG TGATCTAAAA
TACCTTGAAG ATAAAAAACT GCTTATCAGA ATTCACGGAG GAGCAAAAAG TATAAAGAAA
ATTCAGCAGG AAAAACTTTA TGATGACAGA AAAGTAAAGT ATATGAAAGA AAAAGAGCAT
ATTGCCAAAA TAGCAGCTTC TTATATACAG GACGGTGAAA CGGTATTTAT AGCACCGGGA
ACAACAACAG AAAGAATTCC TGAATTTATA AAAGCAAAAA ATGTAACAGT GGTAACTAAT
TCTTATTCTG TAATGGTAAA GTACTCGCAT CTGGACTTAG ACTTCATTGT AACAGGGGGA
AGGCTGAGAA GAAAAACAGA AGCAATTATT CCTGATTATT TTCTGGATTC TATAAGTAAG
ATAAATGTGG ATAAATGTTT TATAGGAGCA AACGGAGTAA GCGGAAACAA AGTAACAATA
TCCAATTATG ACGAGGGTCT GATACAGCAG ATAGTGCTGG AAAATGCAAA AGAAAGATTC
CTGCTTCTGG ACAGTTCAAA GTTTAACAGA GAAGCTTTTT ATTCGTTTTT TAAGGTGGAA
GATCTTGACG GAATAATAAC AGACGGGAAT TTGAAGCCGG ATATAATGAA AGACTACAAA
AAAATAACAA AAATAATAAA TATATAG
|
|---|
| Protein sequence | MKDQRIEVIL SKVKEKGIVS TLELTEELNV TEMTIRRDLK YLEDKKLLIR IHGGAKSIKK
IQQEKLYDDR KVKYMKEKEH IAKIAASYIQ DGETVFIAPG TTTERIPEFI KAKNVTVVTN
SYSVMVKYSH LDLDFIVTGG RLRRKTEAII PDYFLDSISK INVDKCFIGA NGVSGNKVTI
SNYDEGLIQQ IVLENAKERF LLLDSSKFNR EAFYSFFKVE DLDGIITDGN LKPDIMKDYK
KITKIINI
|
|---|
| |