Gene Sterm_3371 details

Gene Information

• Locus tag: Sterm_3371
• ID: 8598822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3553723
• End bp: 3560460
• Gene Length: 6738 bp
• Protein Length: 2245 aa
• Translation table: 11
• GC content: 37%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003310141
• Protein GI: 269121964

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.638586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG GAAAGAAACT ATTAGTATTA TTTCTGGCAT TGAATGCGGT GATGGCGGCT 
TACGCCAAAG GAGAGAAAGC TCCTGTATCA TCACGTTATG ACAGAATGTA TAATAATATT 
GTAAGAAACA TAGAACAGGG AAAACCAAAC GAAAAAAATT ACCAACTAAT AGAACGAATA 
CTCAAACAAA GAAATAAAGA ATTAAAAGAT TTACATATAC AGGGCGATTA CATAGTAAAA 
CCCGAATATC TTGAATGGCA GGTATTTTTT ACGGGATACT ATGATGAGCA CGGAAAAGGC 
GTGGATAATA GTGAAGAAAA CGCAAAATAT CATTCACAGG TAACAGGATA TTATGATGAA 
GAAGGCAATT ATGTAACAAC AAGCAGTGTA AAAGGCGGAA TTGCAGGAAA AGGATATCAG 
GCTTTACAAA AACCAAAGGA TATAAATCTG GGAGTAAGCA TTCCTTTGAA GGGACTCACA 
AGAGAGCCGG TTAATCTGGC ATTGTCAGAG GTTCCGGAGC TGAGCTTCAA TCCGACATTC 
GCAGCTCCAA GTGATCCTAC TAAAGTAATT ACAGCAAATG TAAATGTAGA TACATTTTCC 
ATTAATATTC CTGACATAAC TATTCCGGAT GTGCCAGTAA TCAGCACATT TGCTGTAACT 
GTACCATCAA CAGGAAATGG TGACGACAGC TTTAACAGTC TGGGGAATGC GAGTACATCA 
GACCCTGGAG GAATAACATC ATTTGTAGGA AATTATAATT TTTCAGAGGG TGAATTATCA 
GGAGTATGGA ATAGTCAGTA TATTACTTCA TACTCATATG ATAATCTTAC TGGAACATCT 
AACTGGGCTT CAGGTTCCAA TTCAATGACA AATGCAGGCA GTCTTGGATC GATAACTGTA 
TCTGGTTCTG TACCGGCTTT ATATGAGATA ACAGGTGCTG ATCGTGCAGT ATTCGGAAAG 
AATTTTACCA TATCGATGAC AAGTAATGTG AGCGATACTT ATACAGGAGT TCTTCCTCAC 
CTTATTCAAT ATGACCCTCA TGGATCAAGA ACTACTTATC ACAATTATGA TTATGATTAT 
TACGGGAATG CATTAACAAG CTGGGGAACC TATGACAAAT ACGGAGAATT ATTAAATCAG 
GGAACTATTA AAGGAAATGG AAATTCACTG CTTCTAATTT CATTACAGAT GCACAGCGGA 
AGTTTCAGTC CTACAGTAAG AAATGAAGGA AGTATATTAG GGTTATATGA TAGTAATTAT 
ACAGACGGAG GAAGAAGACA CGTAGCTTTT TCATTTACGG TAAGCGGTTC TACAGCAGCC 
AGAAGACTGG AGTTCTATAA TGCATCGAAC GGACTTGTGG AATTGCAGAC TAAGGAAAGT 
ATAGGATTTA ACTATGCGAA TACAAGTGCT GCGCATCTTT CTATATATAA TGAAGGAGAT 
GTTGTTCTGT ATGGTAGAAA CAGTGTAGGA GTAAAAACAG CAGGAGCAGG AGCAAATACT 
TTAGCTTCTT CAAAACTGGT TTTAAAAACT CCAATAAGAA TAAACGGAGA TTCCAGTATA 
GGTGTAGAGC TTGCCCAGGT AATGGACAGC GGATACGGGA ACCTCACAGC CGGACAGTAT 
GATCCTCAGT CAGCTGAAAT AAGAGTGACT ATAGGGGATG AAAAAAATAA GTATGCCGGA 
AATGCAGCGG GAAATGATGA AAATTTTGTA GAGGGAGCAA TAGGGTTATA TGTAAATCAT 
GCTTCATTAA ATTATAGAAT AAAAGAATAT GAATTACAAT TCGGAGATTA TGCTAAAAAC 
AGTTCACTGG CTTATATAAG TAAAGGATCA TTGACTCTTG ACAATGAAAA ATATTCGGTA 
ATTAACATAG ATAAAGGTGT AGATAACACA GGAATAATAG TAGACGGAAC AAGCTCGACT 
TTAAATCTGT ATCCTCATAT GACAGTAGGA AGTACAGCAG TACCTGTAGA CGGAACTATC 
GCACTGATAG CTAAATCAGG CGGAAAAATA AATCTTTTGG GATCAAACAA TATAGAAACA 
AACGGAAAAG AATCTCATGC TGTAGTTCTG ACAGATACAG GAACAACGCT GACAGGAACT 
TCGGGAGGAG ACCATAGCTT CAAAACAGCG GGAGAAGGCA GTGCAACGCT TTATGTAAAA 
GGCGGTTCAA TTTTGAATCT TGGAACAAGC AATAATGTAG ATGTTTATGC TTTGGGAAAT 
AAATCAATAG GTGTTTATAA TGACAACGGA ACGATCACGC TGGGAACAAC AGGCGGAACA 
TATGAAGTAG GAACAAACGG AGTACTTCTG TATAATTCAG GAGGAGGAAC AATAAATACA 
CCCGGAACAA GCTTTACTGT CGGTGACGGT TCAATATTTT CGATAGCTAA AGATTCAGGG 
ACAAAAACTA ATTTTACATC AGGAAGTACT TTAAATCTGC TGTCAGGATC AACAGGATTC 
ATAGTAGACG GTTCAATGGG AATTCCGAGT TACTTTAGTG CATACTATTC AGGGTTAAAC 
ACTAATATGG ATGTAATACT TTCACAGGAT GCCACATTAA TGGCACTGCA AAATGCAAAT 
TCGACTTTGT CATCATTAAG CTTCGGATCA ATAGGTTCTA TGTTTAAGAG CATTACTCTG 
AATGGAGGAA ATATAGCGTC CCTTTTAGAA GGAACATTAA CTGTAGACCA AAATGTAAAT 
CTGAATGATT CTACAGATGC ATATAATACA ATTGAAAAAT CTTTGATAGG TATTACAAAC 
AATGCTGTAA TTTCTGGAAG TCTGGCTAAT CAGGTAGCTA TAGCAGATAA TTTTTCTTCT 
GTAAATTCTG TAACATACAA TAACATGATA AATAACGGAA CAGTAAGTCT GACAGGTGAC 
GGTTCGGTTG CAATATATGC CAATAACGGA AATATAACTA ATAGTAGTGC TGTTTCAGCT 
ACAGGGAAAG AGAGTTTTGG TATATATGGC GAAAATGGAA CTGTATCAAC AAATACAGGA 
ACTATAACTA TCGGTGATCA GGGAGTAGGT ATTTACGGAG TAAGTTATCA GGATCCGTCA 
AATCCGGGAG CTAACGGAGG CGGATTAATA AATATTACGA ATTCCGGAAG TATTACAGGA 
ACAGGCGGTT CAGGAACAAT AGGAATATAT TCCAATACAA ACAGAACCGG CGGAACAAAA 
GGAGATGCCG TAGTAACACT AAGCGGAGGA ACAATAAATC TTGGTAATGT AACAGAAGCA 
ATAGGTGTTT ATGTAAATAA AGGAACAGTA AATGATACAG GTTCTACAAT AACTGTGGGT 
AAAAATGGAA TAGGAATATA CGCAAAAGAC AGTGATCTGA ATCTAAGCGG AACAAATATA 
AATCTTTATG GAGATAATGC ATTGGGGATG TATCTTGAAG GAGATACAAA TCTGTTAACA 
GGAACAGGAA ATATAGATAT AAACGGACAA AATGTAACAT TATTCTATAT GAATACAATC 
CCGGGAGCAA CAATAAATAA TAATTTTACT GTAAGCTCAT CAGCAGGTTC TACATATACA 
TTAGGAAGCA TGAAAGGCGG TTCACTGGAA TATACAGGTA ATGCAGGACT TGCATCTGAC 
GGAACACTTG TGGTAGGGGA AAATTCTGCA GTGTATCTGA ACGGTTCTGT AATAACAGCA 
GCACCAGGTG CAGTGAATGT AGCAGCTATC GCACTGGATA AGCAATATTC GGGAACAGTT 
CCGGTAGGAA TGACAGCAGG AACAGATGGT GAAAATAACG GAACTATAAT ATTAGGAGAC 
AGCTCAGCAG GTATATACGG GAAAAACGGT TCAAGAATAA GTAACAAAGG TTCTATAACT 
GTAGGAACAG GCTCGGCAGG ACTTATGACT TCGGGAAGCG GATCTTTCGT GTTAAACAGC 
GGTTCTATAA CTGTAGGTTC AGGTTCGCAC GGAATATATC TGAAAGATGG AGCAGGTATT 
GATAATATGG GTTCTGGAAT TATCAGCGGA ACAGGAGCAG GCTCAATAGG ATTATTTTCG 
AATAATAATA CGGGTACTGT AAATAACAGC GGAATTATAG ATCTTACCGG GGATAAATCT 
ATAGGTATTT ATACTATAGG AACAAGCAGT CAGGCTATAA ATAATACAGG TACGGTAAAA 
GTAGGAGATT CGTCAAATAT TTCCGATCCG AGTATAGCTG TATACAGTAA TACTGCTGGA 
AATACAGTAA CGAATTCGGG GACAGTAACA GCAGGAACAG GTTCAATAGG TATTTACAGC 
AATAGCGGAA CAGTTATTAA TAATAATACG TCAAATATAG GAAATTCAGG AATAGGTATA 
TATTCTACAA ACGGAATCGT AAATCTAAAT GCAGGATCAG TAATGAACAT GGGAACTGAC 
GGGGCAGTAG CAGTATACGG AGTATCTTCG GCAGTAAATA ATTCAGCTGA TTTGAATACA 
GGAAATGGAA ATTACGGATT TATATTAAAA GGCGGTTCAT TGGTAAATAA TGCCGGAACT 
AACAGTACAG TAGGAACTGA CTCAGTATAT ATGTACAGTA CAGAAGGTGC AGTAATTACT 
AATAATGGTA ATGTAACAAT GACAGGTTCT GACAATGTCG GATTCTATAT GGCACAGGAT 
CCTGCAAGCG GAGCGGGAGG AGCTGTTATG GCAAATAACG GTATCATCTC CGGAACAGCA 
GGAAATAATA ATGTAGGTAT TTATAATTAC GGCGGAACAG TAGACAACTA CGGTACAGTA 
TCTGTAGGTA ATTCAGATAT TCTGTTTGTT TCAGGAACAA CAGATGTAGA TGTGGAGAAT 
AGTAAATATT CAGTAGGAAT ATATGGAGAA AATGCAGCAA TTGTAAACCA TGCAGGAGCT 
AATGTGTCAG CAGGCTACGG TGGATACGGA ATAGTGGCTA AAGGCGGAAC AGCAAATAAC 
TTTGGTACTG TGACAACAAA TGGTGATTAT TCTACTGGTA TGTATACAGA AGGCGGAGTA 
ATTACAAATG AATCAACAGG AATTATAAAT GTAACAGGCA ATAATGCAAT AGGAATGGCA 
GGAAAAGGTG AAGGCTCTGA AATAATAAAC CATGGTACTA TAAATATAAC AGGTAACGGA 
GCTATAGGAA TGTACGGAAA CCTTGGGACA ATAATCACTA ACACAGGTAC TATAAATATA 
ACAGGTGACG GACAGTTATT TGTATCATCA GACCCTACAA ATTCACTGCA TAATGTAAAT 
TCAGGAACAG CCGGTGTAAA TGGCATATTC GATAATACAA TACAGTCAGT GGGAAGTACA 
CATACACTAC CGTCATTAAT AAATGCGGGA ATAATAAAAA CTAACGGAGT ACTGGCACTA 
GATGGAATAC AGGTACTGAT AAAGCCGGAT CCTTCATCAG TACAGCCTTC TGGAAACCCT 
GACTATGACT TTGCATTATC GGGAACATCA ATAATAGCAG ATGAAATATC AACATCTAAG 
CCTATTGTAA TACTTCCGGG ATTCTCAGAC GGTACAATTG CCAATGTTTA TAAACTGGAA 
GGTGTAATTC AGGCAACATC AGGAAAGTAT GATTTTATAA GCGGATCATT ATTATGGGAG 
GCAACACCTC AGGCTACAGG AAATGGTTCA GATGTATATA TGTCAAGAAA GGCATTTACA 
GAATTTACAG ACGGATTATG GTTTGAAGAT TTCGGGACTT CATTGGAAAA TAATTATCTG 
AGTGCTTCCG GTGACGGAGT GGAAATATAT AATAAAACTG CATATATTCC AAATGAAGAG 
AATTTCAGAC ATATAATGGC AAGTCTTGCA GGAAATGTAT ATGCTAATAT TAATCAAAGA 
GAAAACGATA TAGCAGGAGC ATTTGAAAAT TCGCTGCACT TATTGCAGGA TTCGACAAAT 
AATACAAAAG AAAATGTAAA AATAAGTATT ATAGGCGGAA AAGGGAAGAA TAAAGAAGAA 
ACAGACGGAG TAACAGGTTA TAATTATACT ACAACAGGAG TACTTGCCCT GCGTGAGGTA 
GAAAGAACCT ACAGACATAC ATTCGGATAT TCGCTTGGAT ATTTACATTC AGGATTTGAA 
TTCAACGACG GAAACAGTAG TGAGGAATGG GTAGATACAG TACAGCTAGG TGTACATAAT 
AAGTATAAAG TTAATGACTG GGAAATGAGA AATGATCTTA CAGGAAGAGT AAGCATGCAT 
AATGTGGACA GAAATATAGA CTGGCCTTCT CCGCATGGAA GATCGGAAAT GAACGGAACA 
TATGAAACTT ATAGTGTAAC AAGTGACAAT ATTATTGGTA AAGAATTTAA AATAAGCAAA 
GATGCCAGCA TAATGCCATA TGGAGCATTC AAGGCAATGT ATGTTACAAG ACCGACATTT 
AGTGAGAGCG GATTAGAAAG ACTTGAAGTG GAAGGAAATG ACGCTTGGAG TGCAAAGCCA 
AGAGCAGGAG TGGAACTAAA AGGAGCACTG CCGCTTGGAA AAAATACCGG GGTAAAACTA 
AAAGGTACAT TGGATGTAGC ATATGAATAT GAACTTGCAG ATTTAAATGA AAGAGAAAGA 
GCAAAATTAA TAGCGGTGGA AAATGATTAT CATAATTTAT CAAAACCGCA GGACGAAAAA 
GGAACAATTA GAACAAAGGC GGCAATAGGG GTAGAAGTAG AAGATAAATA TGGAATATTT 
ATTACAGGGG AATATTTTAC AGGTGATAAT AAAGAAAATG ATTACAGAGC AGGTGTAACA 
TTAAAGGCAG TATTTTAG 

 

Protein sequence

MKKGKKLLVL FLALNAVMAA YAKGEKAPVS SRYDRMYNNI VRNIEQGKPN EKNYQLIERI 
LKQRNKELKD LHIQGDYIVK PEYLEWQVFF TGYYDEHGKG VDNSEENAKY HSQVTGYYDE 
EGNYVTTSSV KGGIAGKGYQ ALQKPKDINL GVSIPLKGLT REPVNLALSE VPELSFNPTF 
AAPSDPTKVI TANVNVDTFS INIPDITIPD VPVISTFAVT VPSTGNGDDS FNSLGNASTS 
DPGGITSFVG NYNFSEGELS GVWNSQYITS YSYDNLTGTS NWASGSNSMT NAGSLGSITV 
SGSVPALYEI TGADRAVFGK NFTISMTSNV SDTYTGVLPH LIQYDPHGSR TTYHNYDYDY 
YGNALTSWGT YDKYGELLNQ GTIKGNGNSL LLISLQMHSG SFSPTVRNEG SILGLYDSNY 
TDGGRRHVAF SFTVSGSTAA RRLEFYNASN GLVELQTKES IGFNYANTSA AHLSIYNEGD 
VVLYGRNSVG VKTAGAGANT LASSKLVLKT PIRINGDSSI GVELAQVMDS GYGNLTAGQY 
DPQSAEIRVT IGDEKNKYAG NAAGNDENFV EGAIGLYVNH ASLNYRIKEY ELQFGDYAKN 
SSLAYISKGS LTLDNEKYSV INIDKGVDNT GIIVDGTSST LNLYPHMTVG STAVPVDGTI 
ALIAKSGGKI NLLGSNNIET NGKESHAVVL TDTGTTLTGT SGGDHSFKTA GEGSATLYVK 
GGSILNLGTS NNVDVYALGN KSIGVYNDNG TITLGTTGGT YEVGTNGVLL YNSGGGTINT 
PGTSFTVGDG SIFSIAKDSG TKTNFTSGST LNLLSGSTGF IVDGSMGIPS YFSAYYSGLN 
TNMDVILSQD ATLMALQNAN STLSSLSFGS IGSMFKSITL NGGNIASLLE GTLTVDQNVN 
LNDSTDAYNT IEKSLIGITN NAVISGSLAN QVAIADNFSS VNSVTYNNMI NNGTVSLTGD 
GSVAIYANNG NITNSSAVSA TGKESFGIYG ENGTVSTNTG TITIGDQGVG IYGVSYQDPS 
NPGANGGGLI NITNSGSITG TGGSGTIGIY SNTNRTGGTK GDAVVTLSGG TINLGNVTEA 
IGVYVNKGTV NDTGSTITVG KNGIGIYAKD SDLNLSGTNI NLYGDNALGM YLEGDTNLLT 
GTGNIDINGQ NVTLFYMNTI PGATINNNFT VSSSAGSTYT LGSMKGGSLE YTGNAGLASD 
GTLVVGENSA VYLNGSVITA APGAVNVAAI ALDKQYSGTV PVGMTAGTDG ENNGTIILGD 
SSAGIYGKNG SRISNKGSIT VGTGSAGLMT SGSGSFVLNS GSITVGSGSH GIYLKDGAGI 
DNMGSGIISG TGAGSIGLFS NNNTGTVNNS GIIDLTGDKS IGIYTIGTSS QAINNTGTVK 
VGDSSNISDP SIAVYSNTAG NTVTNSGTVT AGTGSIGIYS NSGTVINNNT SNIGNSGIGI 
YSTNGIVNLN AGSVMNMGTD GAVAVYGVSS AVNNSADLNT GNGNYGFILK GGSLVNNAGT 
NSTVGTDSVY MYSTEGAVIT NNGNVTMTGS DNVGFYMAQD PASGAGGAVM ANNGIISGTA 
GNNNVGIYNY GGTVDNYGTV SVGNSDILFV SGTTDVDVEN SKYSVGIYGE NAAIVNHAGA 
NVSAGYGGYG IVAKGGTANN FGTVTTNGDY STGMYTEGGV ITNESTGIIN VTGNNAIGMA 
GKGEGSEIIN HGTINITGNG AIGMYGNLGT IITNTGTINI TGDGQLFVSS DPTNSLHNVN 
SGTAGVNGIF DNTIQSVGST HTLPSLINAG IIKTNGVLAL DGIQVLIKPD PSSVQPSGNP 
DYDFALSGTS IIADEISTSK PIVILPGFSD GTIANVYKLE GVIQATSGKY DFISGSLLWE 
ATPQATGNGS DVYMSRKAFT EFTDGLWFED FGTSLENNYL SASGDGVEIY NKTAYIPNEE 
NFRHIMASLA GNVYANINQR ENDIAGAFEN SLHLLQDSTN NTKENVKISI IGGKGKNKEE 
TDGVTGYNYT TTGVLALREV ERTYRHTFGY SLGYLHSGFE FNDGNSSEEW VDTVQLGVHN 
KYKVNDWEMR NDLTGRVSMH NVDRNIDWPS PHGRSEMNGT YETYSVTSDN IIGKEFKISK 
DASIMPYGAF KAMYVTRPTF SESGLERLEV EGNDAWSAKP RAGVELKGAL PLGKNTGVKL 
KGTLDVAYEY ELADLNERER AKLIAVENDY HNLSKPQDEK GTIRTKAAIG VEVEDKYGIF 
ITGEYFTGDN KENDYRAGVT LKAVF