Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3354 |
Symbol | |
ID | 8598806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3529163 |
End bp | 3535813 |
Gene Length | 6651 bp |
Protein Length | 2216 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310125 |
Protein GI | 269121948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGCA ATAAGAGAAT GTGCATGTTT TTAGCTTTAG GTTCTATAGC AAGTATTTAT GCAGATAATA ACAATAATAT CTCTAAAAGT AAATATGAAA GACTTTATAA TAATATAACC AAAAATATGG GAAGTAAAAC AGCAGATGAA AATTATAGAC TTTTAGAAAA AATATTAAAT AAAAGAAATA AAGAGTTAAA TGATTTGTAT ATGCAAAGTG ATTATATTGT AAAACCTGAA TATTTAGAAT GGCAGATATT TTTTAGCGGG TTCTATAATA GCAATCACAG AGGCGGATCG AAAGAAACAG TGTCAAGTCT GGAAAAAGGA ACGGCAAAAT CTGTAGATCT GGGAATGTAT ATACCGGTAA AGGGAATTAC AAGGGAAGAT ATAAAATTAA ATATCAGTTC AGTGGATGCG CCGACAGTAA ATGTAAATAT GTCACCTGTA GCAGCTCCTC AGATAACAGC ACCGGTTTTT ACAGTGGGAG ATTTTAGTTT TCCCGCAGCA CCAAATGTGG TAGTACCGTA TTTTGGAGTA CAGAATTCAT ATCAGGGAAA ATCTATAGGA GGAATAACAA CTCTGGTTCG TTATAATACT TCCGGAAACA GAGCTTATGA AAATCTGAAT GTAGAATCAC CTACGGGAAC TACGCTGAAC ATGGACGGAA CAACAAATAA CATATCAGTA ACGGGAGCAG CTTCGTATAA TAATGGTTCG TATACAGGGA CAACAGCTGC TTCTTATACT CATACCGGTT ATAGTACAGG ATTTGCAGTA CATAATATAT CAAATAACGG TAATTTTGAA GTAAAAGGCA ACTGGGATCT GATTATGACT AACGGAGCAA GTTATAATAA CTGGGGCTTT TTAAGCTATA GACCATACTA TGCAACATCA GACAGCAGGC TTGTATTTTC AGGAAACTTA AATTTGCAGG CAGATGATAC TACATCTTCG TTTTCATCAA CAGGACTTGT CGGATTAAGT CTTAATCTGA CAAATTCAAA TCCGAACTCT GGTGCAAAAG CAGTTCTTGA AAATACGGGA ACAATAACAA TAAAAAATGG AACACAATCC GGACAAAGCG GGATAGCAAT GCAGCTGGAC AGGGGAACTG CATCATCTTC AATGGCAGGA GAGCTGATCA ATTCAGGGAA TATCATAATA GAACTGAATA CAGGAAACGT ATCGGGATCA ACAGGAGGAG TAGGAGTATT TGTTGCAGTA GACCCGTACA CAAGGCCTAT TCTGATAAAG CCCGGTAATA TAAGTGTTAC CGGAGAAGGA AACCGGGCTG TGGAAATCGG AGCTTCAGTA TATGGAAGTA ATGATTATGT AAATTCAACA ATAGAAATAG ATGGATCAAA CGGGAAAATA ATACTGGAAG GTACCAAAAA TGTCGGGTTA TATGTTCAAA GAGGTTTGAG TACCACAGGA AACAATATTT TAGATAATGT AAAAAATATG GATATATATA TAAACGGAAC AAATACACCG GCAGTATCAA GAGAAACACA GTCTGCAACG TTAAAAACAA TGGATATGAT ATTAAATGAT ACTGTAATAA AAAAAGTAGA ATTCGGAGCA GACTCCAAGC AAAGTTCTAT AGTAAAAGTG AGTTATGGAA AAGTAACGCT GGACAGCAGT CTTATTAATT CCATAGTCCC TATTAATGCA GGAACTCAAA ATTCTATAGT GTCAGGTTCA TATGGAACAG TAATAAAAAA TTATATGCCT ATTACAATAA ATCCGGGGGC AATAGCAATG ACCGGAATAA TAACTAACGG GACCTTTGAA AATTACGGGG ATATCGTAAA TAATTCTTCT TCATTTACAA CTCAGTGGGG AAGTAATTAC GGGAGTCTGG GTCTTGTAGT CAGCGGAATG GTAGCGGGTG AATATGGTTT AAATAAAGGT AATATTGAAA TGAACGGTAA TTATGCCACT GCTGTTTATA ATAACGGATT AAGTCTGACA TCTGAAAACA GCTATATAGA GGTGAACGGT AAACAACCGA CAGCGGTCTA CAGCGGATCG GGTTCTTTAT ATGTAAACGG GGCATATCAG AATACTTCGT CAGAAACAAA TATTACTACA GACAGACTTG AAGTAAATGG CGACGGGGGA GCAGCTTTAT TTTCAAAAGG CGGGAATATT ACCCTGCAGT CCCAAACTCC AGGACAGGCT ATGGAATTAA CAGTAAACGG AAAGGACAGC TTTGCATTCT TTTTTCAAAA AGATAACTAT ACCACTCTGA CAGGGAAAAC AGTAATTAAT GGTGATGTAA ATGCAAACTT GAAAAACGGG GCAATAGGAT ATTATTATGA AGGCAGCGGA ATATCAAATA CTGTTGATCT TCAGGGATAT GTAAACAGCG TAACTGATGC TTCAAACGGG AAGCTTACTA TAAATACAGA TTCAGACAGC TTTAATATAG CAGTAAAAAA TGCAAAGGTA AATTTAAGTG ATCTGAAGGA TCTGTCAGGA AATTCTTCAA TAGAGTTTAT CGGTTCAGGG AAATCCAAGC TGACTTCATC ACTGCTGGTA ATAGATACAG ATTCCAATAT AGATAAAAAC AATAATACAG GAGATAAAAC ATACAGAAAT ACTGAAATAG GAAAATCCGG AGTATCTGTA AACCAAGGTG TGACAATAAG CGGAACTGAA GATAATCTGG TAGCAATAGG ACAGAGCTAT AAGGCGAATG AGTATAACAG AATAAACAGC GAAAATAACG GGATAATTAC TCTTAGCGGA AATAAATCTA TAGGTATTTA TACTCAAAGA GCAGGGCAGA CTAATACAGG CGCTCTAAAT TTGAACGGTG AAAGCAGTAT AGGGATGTAT ACTACTGCCG GAACTGTCAG AAACAGCAGT GAGATAAATA TTGGAAATAA CGGTGTGGGA ATTTATGCGG AAACTTATCC GGAACCAAAT GATTACACAA CTTCTTATGC AAGTTTTGAT GTATATAATT CCGGGAAAAT AACTGCATCT TCAGGTAAAA AGGCCATAGG AATTTATGTA AATGAAAATT CAAGCGGAGG ATATTACGGA CAGGGAACTC TGTATCTCGA AGACGGGAGT GATATTGATG TAAGCGCTTC AAAAGGCGGT GTAGGAATAT ACTCCAATAA ATCTTATGTT TCAGGTAACG GACTTAATAA AATAACAGCA GGGGAAAACG GAACAGGAAT ATATATTAAA GATAATACTG TATCCCTTAG TAATCTGGAG CTAAATCTGA AGGGAGATAA TTCTGTGGGT ATATATACTG ACGGAACTTC ATCTTTCTCA GGAACAGGAA CGGTAAATGT AGACGGGAAA GGAATAGTAA TATTTAACGT AGCCGGTTCA GGATATTTTA ATCAGAGTTT TTCCGTTAAT TCTACGGTTG ATTCACAGTA TATAGTACAG AATATAAAAG ACAGAACCAT GTTTTATGAT TCGTATGCTT CTTTGGGAGC CGGAGGAACA TTTACTTCCG GAATTAATTC GGCAGTATTG CTCGGAAGTA ATTCATATTT AGATGCGGCA GGAGATAATA TGGTGGGGAT AGCCCTTACA GGTGCTTATT CAGGCGGGCT TCCCGTAACT ATAAATGGTG AAGCTGTAAA TCATGAAGCA ACTAATAAAG GAGTAATAAA TTTCGGCGGC AGCAAATCAA CAGCAATTTA TGTAACAAAT GGTGCTAAGG CAAAAAATGA AGGTTCTGTA TATATGGGGA ATTCTTCTGT GGGATTGTAT GGGAGCGGTG CAGGTACCAG CATTGAAAAT TCCGGATATA TAGGAATCGG AGCGGGATCA TCAGGGCTTT ATATAAAAGA TGGCAGCGCT GTCTCGAATT CGGGTGTAAT TAATAGTACA GGCGAAAAGG CTGTAGGTAT TTATATCGAC GGAACAGCTG ATATTACAGG AGAAAATAAC GGAACTATAA AATTAACAGG TGATAAATCT GTAGGAGTAT ATATTACATC TGGAGGTATA AAAACCTTTA ATAATAATAA TTCTGTAGAA TTAGGCGGTT CAGTGAGCGC GGCTGATCCG AGTATAGGGA TATTCAATAA TAATTCTCAG GGAACGGTTA ATAATTCCAC TGACATGATA CTGGGTGAAA AATCTATAGG TATCTATAAT AAAGGCGGTA TAATAAATCA TACAGCCGGA GATATAAAAA TTGCTCCGGC AGGTACCGGG ATATATATGA ATGCCGGGAA TCTGAATCTT ACAGGCGGGA AATTGTTATT AAGCGGTGAA AAAACAGTAG GAATTTATGC GACAAACGGT GCCGTAACTG ATAATAATGC TGAGATAAGT GTAAGCAGCG GCAGTTATGG TGCAGTGTTA AGCGGGAATG CAGTCTATAC CGGAAGAAAT ATATCTCATT TGGAAGATAC GGGTGTTTTG ATTTATTCTG ACGGTAAAAC AACTGTTATT AATGAAACAG GGGCGGACCT GAATATGTCA GGTTCTGACT CAATAGGCTT TTACATGATA AATGGCGGGG ATATAACAAA TAAAGCCGCA ATAAATGGTG ACAACGGAAC TGCAAATATG GGAATATATA ATAAAGAAGG CAGTATAAAT AACAGCGGTG ATATAAAAAT CGGTAATTCT GTTATAACAG ATCCGGATAA TCCTTTTGCT AATAAGTACG CAGTGGGAGT CTACGGAGAA AATGTACAGA ATATGCAAAA CAGCGGAAAT ATATCTATTG GTTCCGATGC AGTAGGTTTT TACTCGATAA ATAATATAAA TGAATCTCTG AATACTGGAA ATATAACATC TGTGTCAGAA AAAGCAGTGG GGATATACAT AGAGCAGGGA GCAGTAAGAA ATGAAGGCAA TATTACATTA TCGGGAGACG GAAGTATCGG AATAGCCGGA ACAAGAAATA CTGAGATTAC AAATGCAGGA ATTATAACAA TGAATGGTAA CGACAGTATG GGTATTTATG CTAATGCCAA TTCGAAGGTA ATAAATGAAA GTACGGGAAA GATATATATA AACGGAAATA ACAGTACAGG AATACAGCTT TCAGGAGGTT CAATACTTGA AAATCACGGA CTGATAGAAA TAGCTTCCGG AACAATAGGT TCTGTACAGG TAGTAACCGG AGAAGCGGCA TATACTCCTC CAAGTATAAT AAACGCAGGA ATTATAAAGG TGGATGAAAA ATTCGAGCTG AACGGCTTTG ATCTTATTAT AAAGCCTGAT CCGTCAAGCT TTAGAGTACC TACAGCAGAA GAGGTTGCTC TAAATGGTTA TTCGCCGGAA GATATAAACG GCGGTTTTCT TCTAAGCAAC AGTGTGAGTA TAGTGGCACC GGGATTTAAT TTTGGTGACA ATGTTGCAAA AATAGACCCG TTATTTACTC AGGGAACTAA TGCAAGGGTG TATAAATTTG AAAATGTATT TGATCCTACT ACTCCGGGCG GAGGACAAAA TACCGGAGAA GTGTCTGTAA AAAGTACTTC AGTGACATTT GATGCAATTC CGGTAACGAA TGCACAGGGG AAAATAGATA TATGGATGGA AAAGATCAAT TATGACAACT TTACACAAGG AGCATGGTAT GACGGCTTTG CCAAAAATAT AGAAAATAAA TATCTAAATG CACAGGGTGA TGCACTGAAA ATTTATGACA GGCTTGATCT TATAAAAGAT GAAAATACAT TAAGAGATAG TTTAGAGCAG CTTTCGGGAA GCATGTATGC CAATATAAAC CAAAGAGAAC AGGATATTTA CGGTGTACTA AATAATGCCT TGTTTACACT GCAGAATTCA GAGAACAACA CAAAAGAAAA TGTAAAAATA AATGTAATAG CAGGTAAAGG AAGCACTAAG GAAGATACGA GCGGAGTAGA GTCATATGAT TATAATACAG TAGGTGTACT GGCGCTTAGG GAAGTAGAAA GAACATACAG ACATACATTT GGTTATTCAC TTGGGTATAC AAGAACTGAT TTTCAGATGA AGAATACTGA TAATGAGGAT CAGGCAGATA CTATACAGCT TGGATTACAT AATAAATATA CTGTAAACGG ATGGAATTTC CGAAATGACC TGCTGGGAAG AGTGAGCTTC CATACAAATG ACAGAAGCAT TACATGGTAT GATAAAACAA AGTCAGATAT GAAATCGGAT TATAATGTAT ACGGTCTAAG CTCATTAAAT GAAATTGGAA AAGACTTTGA AATAGGGCGG AATGTAAAGA TGGTACCTTA TACAGGTCTG GAGCTGGGAT ATATGACACA TGAAAGCTTT GAGGAGAGCG GAGCTGCCGA AAGTCTGAAG GTGGAAAGCA ATGATGCTTA CAGTATAAAG CCAAGTATAG GTGTAAGACT GGAAGCGGAA AAAAGGCTCG GATCGGAGTC AAACTGGAAA ATCAAGGGTA ATATAGGAGC AGGTTATGAA TATGAGCTTG GAAATATGAA CAGACAGGAA GAAGCCGGTC TTTCAGCAAT AGAAGAAGGT CATCATAAAC TGGCACAGAC AGCTGAGGAT AAGGGGAGAT TAAAGACAAA CGGTATAATA GGGGTGGAAT TAAAAGACAG ATATGGAATA TTCCTTACAG GAGAATACGG AATAGGAAAT GAAAAGAAAG AAGATTATAA AGTAGGAGTT TCTTTTAAGG CTTCATTTTA G
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Protein sequence | MLGNKRMCMF LALGSIASIY ADNNNNISKS KYERLYNNIT KNMGSKTADE NYRLLEKILN KRNKELNDLY MQSDYIVKPE YLEWQIFFSG FYNSNHRGGS KETVSSLEKG TAKSVDLGMY IPVKGITRED IKLNISSVDA PTVNVNMSPV AAPQITAPVF TVGDFSFPAA PNVVVPYFGV QNSYQGKSIG GITTLVRYNT SGNRAYENLN VESPTGTTLN MDGTTNNISV TGAASYNNGS YTGTTAASYT HTGYSTGFAV HNISNNGNFE VKGNWDLIMT NGASYNNWGF LSYRPYYATS DSRLVFSGNL NLQADDTTSS FSSTGLVGLS LNLTNSNPNS GAKAVLENTG TITIKNGTQS GQSGIAMQLD RGTASSSMAG ELINSGNIII ELNTGNVSGS TGGVGVFVAV DPYTRPILIK PGNISVTGEG NRAVEIGASV YGSNDYVNST IEIDGSNGKI ILEGTKNVGL YVQRGLSTTG NNILDNVKNM DIYINGTNTP AVSRETQSAT LKTMDMILND TVIKKVEFGA DSKQSSIVKV SYGKVTLDSS LINSIVPINA GTQNSIVSGS YGTVIKNYMP ITINPGAIAM TGIITNGTFE NYGDIVNNSS SFTTQWGSNY GSLGLVVSGM VAGEYGLNKG NIEMNGNYAT AVYNNGLSLT SENSYIEVNG KQPTAVYSGS GSLYVNGAYQ NTSSETNITT DRLEVNGDGG AALFSKGGNI TLQSQTPGQA MELTVNGKDS FAFFFQKDNY TTLTGKTVIN GDVNANLKNG AIGYYYEGSG ISNTVDLQGY VNSVTDASNG KLTINTDSDS FNIAVKNAKV NLSDLKDLSG NSSIEFIGSG KSKLTSSLLV IDTDSNIDKN NNTGDKTYRN TEIGKSGVSV NQGVTISGTE DNLVAIGQSY KANEYNRINS ENNGIITLSG NKSIGIYTQR AGQTNTGALN LNGESSIGMY TTAGTVRNSS EINIGNNGVG IYAETYPEPN DYTTSYASFD VYNSGKITAS SGKKAIGIYV NENSSGGYYG QGTLYLEDGS DIDVSASKGG VGIYSNKSYV SGNGLNKITA GENGTGIYIK DNTVSLSNLE LNLKGDNSVG IYTDGTSSFS GTGTVNVDGK GIVIFNVAGS GYFNQSFSVN STVDSQYIVQ NIKDRTMFYD SYASLGAGGT FTSGINSAVL LGSNSYLDAA GDNMVGIALT GAYSGGLPVT INGEAVNHEA TNKGVINFGG SKSTAIYVTN GAKAKNEGSV YMGNSSVGLY GSGAGTSIEN SGYIGIGAGS SGLYIKDGSA VSNSGVINST GEKAVGIYID GTADITGENN GTIKLTGDKS VGVYITSGGI KTFNNNNSVE LGGSVSAADP SIGIFNNNSQ GTVNNSTDMI LGEKSIGIYN KGGIINHTAG DIKIAPAGTG IYMNAGNLNL TGGKLLLSGE KTVGIYATNG AVTDNNAEIS VSSGSYGAVL SGNAVYTGRN ISHLEDTGVL IYSDGKTTVI NETGADLNMS GSDSIGFYMI NGGDITNKAA INGDNGTANM GIYNKEGSIN NSGDIKIGNS VITDPDNPFA NKYAVGVYGE NVQNMQNSGN ISIGSDAVGF YSINNINESL NTGNITSVSE KAVGIYIEQG AVRNEGNITL SGDGSIGIAG TRNTEITNAG IITMNGNDSM GIYANANSKV INESTGKIYI NGNNSTGIQL SGGSILENHG LIEIASGTIG SVQVVTGEAA YTPPSIINAG IIKVDEKFEL NGFDLIIKPD PSSFRVPTAE EVALNGYSPE DINGGFLLSN SVSIVAPGFN FGDNVAKIDP LFTQGTNARV YKFENVFDPT TPGGGQNTGE VSVKSTSVTF DAIPVTNAQG KIDIWMEKIN YDNFTQGAWY DGFAKNIENK YLNAQGDALK IYDRLDLIKD ENTLRDSLEQ LSGSMYANIN QREQDIYGVL NNALFTLQNS ENNTKENVKI NVIAGKGSTK EDTSGVESYD YNTVGVLALR EVERTYRHTF GYSLGYTRTD FQMKNTDNED QADTIQLGLH NKYTVNGWNF RNDLLGRVSF HTNDRSITWY DKTKSDMKSD YNVYGLSSLN EIGKDFEIGR NVKMVPYTGL ELGYMTHESF EESGAAESLK VESNDAYSIK PSIGVRLEAE KRLGSESNWK IKGNIGAGYE YELGNMNRQE EAGLSAIEEG HHKLAQTAED KGRLKTNGII GVELKDRYGI FLTGEYGIGN EKKEDYKVGV SFKASF
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