| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3351 |
|---|
| Symbol | |
|---|
| ID | 8598803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3525891 |
|---|
| End bp | 3527681 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | Beta-lactamase |
|---|
| Protein accession | YP_003310122 |
|---|
| Protein GI | 269121945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGGA CGAATTTTAT CTGTTTTTTG ATGAATTCTT TTACAATATC TGTTTTTATT
TTAGTTATTC TGGGAATAAA AGGTATATTT AAAAAACATA TTACTGCAAA ATGGCAGAAT
AATACTGATT TTTTATTTCT GTTAATATTA GCTGTACCTT TTATACCAAG CAGAATTTTT
GATTACAGAG TTTTGAATAA TTTTACGTTT CATAAGCTGA ATGCAGGTCA GATTACAGAA
ATCGGAATGG CGGGAAACGA CAGAAGCGGG ACTTTAGTAC ATGCTGCTGA CTGGATTCAG
GATTTTGGCG TATCTGCCAA TCATTCAATG CCTGAATATA TTGTCTTATT TTTGATAGGA
GTATGGGCTG CCGGAATTTT CATATTTTTA TTTCTCATAA TTATGGGCAG TTTTAGACTT
GGAAAAATCG GAAAATCACT AATTTTTGTG AGAGATAAGA AAATAAACGA TCTTTATGCG
GAATGCTGCA ATATACTTAA AATAAGCAAG AAACCTGTGA TGGGGACGTC TTCTCTTACC
CGGGTTCCGG TAACAATGGG AGTCTTTCGG TCATATATCG TACTTCCTGA AAAAATATCC
GAGCAGTTCA GCTCAAAAGA GATAAAATAT ATTTTTTTAC ATGAACTGAA TCATTATAAA
AGCAGGGACG TTTTGATTAA CTGGATAATG CTGTTTTTTC AGGTTATTTA CTGGTTTAAT
CCGCTGATAT GGCTGATTTT TAAGCAGATA CGCATTGACA GAGAAATAGC TTGCGATGCT
GCAGTGCTGA AAGTGCTTGA TGAAACCTCT TTTCATGATT ACGGATATAC TATTATAAAT
TTTATAACAA AATTATCTGA AACTCCTCAC ATGTTTATGA CAGCAAGTTT GGGAGGAACT
AAAAAAGAAC TCAAAAAGCG AATAAAAAAA ATAGCGGTTT ATACCAGAGA AACAATCAGC
ATGAAAATAA AGAGTTTTTT TGTTTTTACG GGACTGAGTG TTTTTTTGCT GAGTCAGATT
CCGGCTGTAA CACAGATGGC TTATACTGAA AAGTATGATT TTCGGGGAAA AAATATTGTT
TATGAAGATC TCAGCACTTA TTTCAGGGGA TTTAACGGAA GCTTTGTTTT ATATAACATG
AAAAATGATC AGTATTTTAT TTATAACAGG GATAAAAGTA TCACCAGAAC AGCACCTGAT
TCTACCTATA AGATATATGA CGCACTTATC GGGCTGGAGC TGGGAATAAT AAAAAATGAT
GATTCTGTTA TGAAATGGGA CGGGAAAAAG AATCCTTATC AAGTGTGGGA TCAGGATCAG
ACTCTTGAAA GTGCATTAAG AAATTCCGTA AACTGGTATT TTCAGGAAAT CGATAAAAAA
GCCGGGAAAA AACAGCTTTA TTCTTATTAT AAAAAAATAG CCTACGGAAA TTATAATCTT
GCCGGAGATA TATCAGATTA CTGGATGGGT TCTTCTTTAC GGATTTCTCC GGTGGAGCAG
GTTTTACTGC TGAAAAATTT TTATACAGGC AGTTTGGATT TCAGTAATAA AAACATAAAA
ACTGTAAAAA ATGCAATGAA ATTATCAGAA AATAACAAAG CTGCCCTTTA TGGAAAAACA
GGAACCGGAG CAGTAAACGG AAAGAATGTA AACGGCTGGT TTGTGGGCTT TGTGGAAAAG
GAAGATAATG TATTTATTTT TGCCGTGAAT ATTCAGGGAA AGGATGATGC AGGCGGGAAA
AAAGCAGCAG AGACTGCATT GGCTGTTTTG AAAGATAAGA ATATATATTA A
|
|---|
| Protein sequence | MIRTNFICFL MNSFTISVFI LVILGIKGIF KKHITAKWQN NTDFLFLLIL AVPFIPSRIF
DYRVLNNFTF HKLNAGQITE IGMAGNDRSG TLVHAADWIQ DFGVSANHSM PEYIVLFLIG
VWAAGIFIFL FLIIMGSFRL GKIGKSLIFV RDKKINDLYA ECCNILKISK KPVMGTSSLT
RVPVTMGVFR SYIVLPEKIS EQFSSKEIKY IFLHELNHYK SRDVLINWIM LFFQVIYWFN
PLIWLIFKQI RIDREIACDA AVLKVLDETS FHDYGYTIIN FITKLSETPH MFMTASLGGT
KKELKKRIKK IAVYTRETIS MKIKSFFVFT GLSVFLLSQI PAVTQMAYTE KYDFRGKNIV
YEDLSTYFRG FNGSFVLYNM KNDQYFIYNR DKSITRTAPD STYKIYDALI GLELGIIKND
DSVMKWDGKK NPYQVWDQDQ TLESALRNSV NWYFQEIDKK AGKKQLYSYY KKIAYGNYNL
AGDISDYWMG SSLRISPVEQ VLLLKNFYTG SLDFSNKNIK TVKNAMKLSE NNKAALYGKT
GTGAVNGKNV NGWFVGFVEK EDNVFIFAVN IQGKDDAGGK KAAETALAVL KDKNIY
|
|---|
| |