Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3313 |
Symbol | |
ID | 8598765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3485902 |
End bp | 3486720 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003310084 |
Protein GI | 269121907 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000795793 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATGT CTTTGGAAAG CCTGACAGAA AAAATTTTGG AATTAAAAAA ACAGGGAAAA GTTTTGGAGC AAATTCCCGT TTACAGGGAA CTGCTTTTTG CTGCGAGACA GAATTACGGT ACTGAGAGTA ATGAAGTAAT AACAATATTA AATGATTTAG GCGGAATTTT GAGATATGTA GGCGAATATA GCGAGGCAGA GAGCTATTTG CTTGAGTCAG AAAAGCTTAT AAGAAAAAAA TACGGCACAG ATAATAGAGA ATATGCCACT TGTATTTTAA ATCTTGCAGA ATTATACAGA TTTATGAGAG AGTATGATAA AGCTCTGGAG CTTTATAAAA AGAGCATGAA AATATATTCA GCAAATGGTG AAAACGGATA TCTATATGCA AGTGTATGTA ATAATCTGGG GCTTTTATAT CAGGATATAA AGGAATACGA AAAGGCTTTG GAGCTGCATG AAAAAAGTCT GGAAATTCTG GGAAAGCTGT CGGATTACAG GCTTGAATAC GGAACTACTC TTAATAATCT TGTACTTCCT TATAAATTAA CTGGAAAAAG GGAAAAAGCT AAAAAATGTA CGGAAGAAGC TTTGGAAATA TTTGCCGGAA CACTGGGAAA AGAGCATTCG CTTTATTCAG CGGCTTTAAA CAATCTTGCT ATATTTTTCT ATGAAGAGAA GGAATATAAA AAAGCCGGAG ATTTATTTGA GGAAAGCCTT CGGATTTGTG AAAAGACATT TGGAAAAAAC AGCATTAATT ATAAAAATCT TGAAGAGAAT TTGAAAGCAG TAAGGGCAAA AACAGGTGAA GAATCATGA
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Protein sequence | MEMSLESLTE KILELKKQGK VLEQIPVYRE LLFAARQNYG TESNEVITIL NDLGGILRYV GEYSEAESYL LESEKLIRKK YGTDNREYAT CILNLAELYR FMREYDKALE LYKKSMKIYS ANGENGYLYA SVCNNLGLLY QDIKEYEKAL ELHEKSLEIL GKLSDYRLEY GTTLNNLVLP YKLTGKREKA KKCTEEALEI FAGTLGKEHS LYSAALNNLA IFFYEEKEYK KAGDLFEESL RICEKTFGKN SINYKNLEEN LKAVRAKTGE ES
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