Gene Sterm_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3313 
Symbol 
ID8598765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3485902 
End bp3486720 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content34% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003310084 
Protein GI269121907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000795793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGT CTTTGGAAAG CCTGACAGAA AAAATTTTGG AATTAAAAAA ACAGGGAAAA 
GTTTTGGAGC AAATTCCCGT TTACAGGGAA CTGCTTTTTG CTGCGAGACA GAATTACGGT
ACTGAGAGTA ATGAAGTAAT AACAATATTA AATGATTTAG GCGGAATTTT GAGATATGTA
GGCGAATATA GCGAGGCAGA GAGCTATTTG CTTGAGTCAG AAAAGCTTAT AAGAAAAAAA
TACGGCACAG ATAATAGAGA ATATGCCACT TGTATTTTAA ATCTTGCAGA ATTATACAGA
TTTATGAGAG AGTATGATAA AGCTCTGGAG CTTTATAAAA AGAGCATGAA AATATATTCA
GCAAATGGTG AAAACGGATA TCTATATGCA AGTGTATGTA ATAATCTGGG GCTTTTATAT
CAGGATATAA AGGAATACGA AAAGGCTTTG GAGCTGCATG AAAAAAGTCT GGAAATTCTG
GGAAAGCTGT CGGATTACAG GCTTGAATAC GGAACTACTC TTAATAATCT TGTACTTCCT
TATAAATTAA CTGGAAAAAG GGAAAAAGCT AAAAAATGTA CGGAAGAAGC TTTGGAAATA
TTTGCCGGAA CACTGGGAAA AGAGCATTCG CTTTATTCAG CGGCTTTAAA CAATCTTGCT
ATATTTTTCT ATGAAGAGAA GGAATATAAA AAAGCCGGAG ATTTATTTGA GGAAAGCCTT
CGGATTTGTG AAAAGACATT TGGAAAAAAC AGCATTAATT ATAAAAATCT TGAAGAGAAT
TTGAAAGCAG TAAGGGCAAA AACAGGTGAA GAATCATGA
 
Protein sequence
MEMSLESLTE KILELKKQGK VLEQIPVYRE LLFAARQNYG TESNEVITIL NDLGGILRYV 
GEYSEAESYL LESEKLIRKK YGTDNREYAT CILNLAELYR FMREYDKALE LYKKSMKIYS
ANGENGYLYA SVCNNLGLLY QDIKEYEKAL ELHEKSLEIL GKLSDYRLEY GTTLNNLVLP
YKLTGKREKA KKCTEEALEI FAGTLGKEHS LYSAALNNLA IFFYEEKEYK KAGDLFEESL
RICEKTFGKN SINYKNLEEN LKAVRAKTGE ES