Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3297 |
Symbol | |
ID | 8598749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3470516 |
End bp | 3471526 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003310068 |
Protein GI | 269121891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000138483 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TTTGTTATTT ACTGATAGTT CTTGTTTTTA TATTTTCATG TAAGAAGAAA GAAGAAGCAG TAGAATTAGC CCTGCCTGTA AAGGTAGCAG ATTTAAAAAA TGAAACACTG GAATTGACTT ATTCGGGAAA TGCTGAAATA AAACCGGTGG ATGAAGTGCC ATACACGGCT TCATCAAGCG GAACGTTAAA AATTATAAAT TTCAAAAACG GAGACTATGT GCAGAAAGGT CAGCTGATAC TGGCAATAGA TGATCAGCAG ACAAGATCAA GCCAGATGTC GGCTTCGTCT GAATACAGCA TAGCCAAAGT AGAGTATGAT AAAATGAGAA CACTTTATGA AAAAAGACTG GTAACAGAAA CAGATTACTT TGCGGCTAAG AGCAGATTTG ATTCAGCGGC AGCTAATCTC GCAGCTACGA ATGACAGCGT AAACAGAACG ATCATCAGAG CAGATGTAAG CGGTGTTATT TCCGGGCTGA ATCTGAAGCA GTATCAGGAA ATCAGAGTAG GAGATACATT ATTTACTCTT GTAAGCGAAG ATACCATGGA ACTGGAAATC GGTGTTCCTG CAAACACAAT AAGCATGATA CATATAGGAA GTGCAGTTAA AGTAAAAGTA AGTGAAATAA ATAAAGAGGT AGAAGCTTTC GTAAGTGAAG TGAGTCCTGC GGCGGATCCT GTTACAAGAC AGTTTCTAAT CAAAGTACGT ATTCCTAATC CCGACCGTGA ACTTAAAAAA GGTATGTACG GTGTGGCAAG TGTAGATTTA GGTTCTACGC AAGGCTTGGT GGTTCCGCAG ACATCAATAG TAATAAAAGG AATAAGCAAG GTAATATTTA TTAATGATAA CGGAGTAGCA AAACAGGTTA AGGTAAACAT AACAAACCAA AATGATCAAA GCGCAGTTGT AGAAGGCGAA GGACTAACAA CAGGAGTACA ATATCTGATA GAAGGACAAA CTACTATAGA AAACGGCGAA AAGATAAGAG TAGTACAGTA G
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Protein sequence | MKKICYLLIV LVFIFSCKKK EEAVELALPV KVADLKNETL ELTYSGNAEI KPVDEVPYTA SSSGTLKIIN FKNGDYVQKG QLILAIDDQQ TRSSQMSASS EYSIAKVEYD KMRTLYEKRL VTETDYFAAK SRFDSAAANL AATNDSVNRT IIRADVSGVI SGLNLKQYQE IRVGDTLFTL VSEDTMELEI GVPANTISMI HIGSAVKVKV SEINKEVEAF VSEVSPAADP VTRQFLIKVR IPNPDRELKK GMYGVASVDL GSTQGLVVPQ TSIVIKGISK VIFINDNGVA KQVKVNITNQ NDQSAVVEGE GLTTGVQYLI EGQTTIENGE KIRVVQ
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