Gene Sterm_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3297 
Symbol 
ID8598749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3470516 
End bp3471526 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content38% 
IMG OID 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_003310068 
Protein GI269121891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000138483 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TTTGTTATTT ACTGATAGTT CTTGTTTTTA TATTTTCATG TAAGAAGAAA 
GAAGAAGCAG TAGAATTAGC CCTGCCTGTA AAGGTAGCAG ATTTAAAAAA TGAAACACTG
GAATTGACTT ATTCGGGAAA TGCTGAAATA AAACCGGTGG ATGAAGTGCC ATACACGGCT
TCATCAAGCG GAACGTTAAA AATTATAAAT TTCAAAAACG GAGACTATGT GCAGAAAGGT
CAGCTGATAC TGGCAATAGA TGATCAGCAG ACAAGATCAA GCCAGATGTC GGCTTCGTCT
GAATACAGCA TAGCCAAAGT AGAGTATGAT AAAATGAGAA CACTTTATGA AAAAAGACTG
GTAACAGAAA CAGATTACTT TGCGGCTAAG AGCAGATTTG ATTCAGCGGC AGCTAATCTC
GCAGCTACGA ATGACAGCGT AAACAGAACG ATCATCAGAG CAGATGTAAG CGGTGTTATT
TCCGGGCTGA ATCTGAAGCA GTATCAGGAA ATCAGAGTAG GAGATACATT ATTTACTCTT
GTAAGCGAAG ATACCATGGA ACTGGAAATC GGTGTTCCTG CAAACACAAT AAGCATGATA
CATATAGGAA GTGCAGTTAA AGTAAAAGTA AGTGAAATAA ATAAAGAGGT AGAAGCTTTC
GTAAGTGAAG TGAGTCCTGC GGCGGATCCT GTTACAAGAC AGTTTCTAAT CAAAGTACGT
ATTCCTAATC CCGACCGTGA ACTTAAAAAA GGTATGTACG GTGTGGCAAG TGTAGATTTA
GGTTCTACGC AAGGCTTGGT GGTTCCGCAG ACATCAATAG TAATAAAAGG AATAAGCAAG
GTAATATTTA TTAATGATAA CGGAGTAGCA AAACAGGTTA AGGTAAACAT AACAAACCAA
AATGATCAAA GCGCAGTTGT AGAAGGCGAA GGACTAACAA CAGGAGTACA ATATCTGATA
GAAGGACAAA CTACTATAGA AAACGGCGAA AAGATAAGAG TAGTACAGTA G
 
Protein sequence
MKKICYLLIV LVFIFSCKKK EEAVELALPV KVADLKNETL ELTYSGNAEI KPVDEVPYTA 
SSSGTLKIIN FKNGDYVQKG QLILAIDDQQ TRSSQMSASS EYSIAKVEYD KMRTLYEKRL
VTETDYFAAK SRFDSAAANL AATNDSVNRT IIRADVSGVI SGLNLKQYQE IRVGDTLFTL
VSEDTMELEI GVPANTISMI HIGSAVKVKV SEINKEVEAF VSEVSPAADP VTRQFLIKVR
IPNPDRELKK GMYGVASVDL GSTQGLVVPQ TSIVIKGISK VIFINDNGVA KQVKVNITNQ
NDQSAVVEGE GLTTGVQYLI EGQTTIENGE KIRVVQ