Gene Sterm_3279 details

Gene Information

• Locus tag: Sterm_3279
• ID: 8598732
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3445629
• End bp: 3446414
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 36%
• Product: NLPA lipoprotein
• Protein accession: YP_003310051
• Protein GI: 269121874

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TATTACTTTT ATTATTAGTA TCAGGTTTGA TTTTTTCCTG TGCAAAAAAA 
GAAAAAGAAA TCGTACTAAG AGTCGGGGCA TCTCCGATTC CTCATTCTGA AATTCTGAAA 
ATAGCAGCAG AAGAATTACA AGCAGAAGGA ATAAAGCTGG AAATAGTAAG CTTTGAAGAT 
GCTGTACTGC CGAATCAGGA AGTCGCAGGT AAGGGGCTGG ATGCAAATTT TATTCAGCAT 
GTCCCGTATA TGGAGGATTT CAATAAAAAA TATAATTCCA AGCTCATATC AGCTGCTAAA 
ATACATGTGG AGCCGCTGGC ACTTTATTCG AAAAAAATCA AAGACATAGA AGAACTTCCT 
GAAGGTGGAG AAATTCTGAT ACCGAATAAT GCCACTAATC AGGGAAGAGC ACTTTTACTG 
CTGGATAAAA ATGGTATTAT AAAGCTTAAA GATAATAAAA AGCTGGATTC TACACCTGAG 
GACATTCTGG AAAATCCCAA AAAGCTGAAA ATAGTGCCAA TGGCGGCAGA ACAGATAGCA 
CCAAGGATAA ATGAAGTAGA CGGGGCGATT ATAAACGGAA ACTTTGCTAT GAAGAATAAT 
CTTACTATCG CCGAAGATGC AGTACTTGTA GAAGATAAAG ACTCGCCTTA TGCCAATGTT 
CTGGTTATTC TGAGCGGGAA TGAAAATAAT GAGTCTGTAA AAAAATTAAT TAAAGCATTG 
CAGAGTGACA GGGTAAGGGA ATTTATAGAA AATAATTATA ATGGTGCTGT TATTCCGGCA 
TTTTAA 

 

Protein sequence

MKKILLLLLV SGLIFSCAKK EKEIVLRVGA SPIPHSEILK IAAEELQAEG IKLEIVSFED 
AVLPNQEVAG KGLDANFIQH VPYMEDFNKK YNSKLISAAK IHVEPLALYS KKIKDIEELP 
EGGEILIPNN ATNQGRALLL LDKNGIIKLK DNKKLDSTPE DILENPKKLK IVPMAAEQIA 
PRINEVDGAI INGNFAMKNN LTIAEDAVLV EDKDSPYANV LVILSGNENN ESVKKLIKAL 
QSDRVREFIE NNYNGAVIPA F