Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3268 |
Symbol | |
ID | 8598721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3429922 |
End bp | 3431721 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003310040 |
Protein GI | 269121863 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.856994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATG AAAAAGCAAC AGGAATGAAA AGACTGTGGG AACTGGCAAC TGTTGAAAAA GGACTGGTGT ATATATCCTG TGTTTTATCG GTATTATCTA CGCTTGCTTC CTTTATACCT TTTGCTGCAG TTTATTTCAT CATAAAAGAG CTGTTTGATG CATCAGGAAA TGTAGCTGGA ATAGACGGTA TTAAGATGAT TAATTACGGC TGGCTTGCAT TTATCGGAGT TTTTATGACA GTATTCCTGA ATTTTGCAGG ATTATGCTGT TCACATATAG CTGCATTTAA AACCTTGTAT AAATTAAGGC TTCAGTTTAT AACACATCTT GCGAAGCTGC CCTTGGGATT TCATTCAACG AATTCTGTGG GAAGAATGAG GAAGATAATA GATGAAAATA TTGAGAAACT GGAAGTATTC ATAGCACACC AGCTGCCGGA TATGGCAGGT TCATTTTCGG CACCTGTAAT TCTGCTTATA TTCTTGTTTC TCTTTGATTT TCGGCTGGGA CTGGCGTCGC TGATCCCGGT AGTACTTGCT TATTACGTAC AGACAAGATC ATTCGGGAAA ACGAAAGCAA ATAAATTTAT GAAGCTTTAT CAGGATGCCC TTGAGGAAAT GAACAGTGCT TCAGTGGAAT ATATAAGAGG AATTTATATA ATAAAGGCTT TTAACCAGAC TGTATTTTCG TTCAAAAAAT TTCGTGAAAC AATAAAAATC TATACGAAAT TTTGTCTGGA ATACACTAAT AATTTCAGGC AGATAATGAC GTTATTTTTT GTATTGATTA ATAATGTATA TCTTTTTCTG ATACCTGCCG GACTGCTTAT TTTTTCAAAA ACCAATGAGA AGAGAAGCTT TGCCATGACA TTTATATTTT ATCTGATATT GTCAGGATCA TTTTCTTCAC TGTTTATGAA ATTAATGTAT GTATCGTCAA TGAGCTCGGA AATAGTCGAC GGTATTGAAA GAATGGACAA AATAACAGAT ATAAGACCGC TCCCGGAAGC TGCAAGTCCG AAATCAATAA ACGGATATGA CATTGCTTTT GAAAATGTAA GTTTTTCATA TAATGATTCC AAAGAAAATG AAGCATTAAG CTCTGTTTCT TTCAAAGCGA AGCAGGGGGA GATAACAGCA CTTGTAGGTG CCTCAGGAAG CGGGAAAAGT ACAATAGGGC ATTTGACAGC AAGATTCTTT GACGTGTCGG AAGGAAGGAT TACTATAGAT AATGTGGATA TTCGTGATAT TGCTTCGGAA GAGCTGATGA AGAATATAAG CTTTGTATTT CAGGATATAT TTTTATTTAA ACAGAGTATT TCCGAAAATA TTCTTATGGG AAATAAAACA GCCGGTATGG ATGAGGTCAT AAAAGCTGCC AAAGCAGCAC AATGTCATGA TTTCATTATG GAGCTGCCGA TGAAATACGA TACTGTTATA GGAACCAAAA GCATTCATCT TTCAGGGGGA GAACGTCAGA GGATAGCACT GGCAAGGGCT GTTTTGAAAG ATGCACCTGT AATTATTCTG GATGAAGCTA CTGCTTTTTC AGATCCGGAA AATGAGATGA AGATACAAAA TGCTCTCGGA GAACTGATAA AAAATAAAAC AGCCTTGATT ATTGCACACA GGCTTTCCAC GATACAGAAT GCCGATAATA TAATAGTTAT GGATAAAGGA AAAATAACGG AAGAGGGTAA ACACGGGGAA CTAATGGAAA AAGAAGGGAA ATATTATAAG ATGTGGGAAA ATTATACAAA GGCTCTGTCA TGGCATCTTG TGGAAGAGGG TGATCAATAA
|
Protein sequence | MENEKATGMK RLWELATVEK GLVYISCVLS VLSTLASFIP FAAVYFIIKE LFDASGNVAG IDGIKMINYG WLAFIGVFMT VFLNFAGLCC SHIAAFKTLY KLRLQFITHL AKLPLGFHST NSVGRMRKII DENIEKLEVF IAHQLPDMAG SFSAPVILLI FLFLFDFRLG LASLIPVVLA YYVQTRSFGK TKANKFMKLY QDALEEMNSA SVEYIRGIYI IKAFNQTVFS FKKFRETIKI YTKFCLEYTN NFRQIMTLFF VLINNVYLFL IPAGLLIFSK TNEKRSFAMT FIFYLILSGS FSSLFMKLMY VSSMSSEIVD GIERMDKITD IRPLPEAASP KSINGYDIAF ENVSFSYNDS KENEALSSVS FKAKQGEITA LVGASGSGKS TIGHLTARFF DVSEGRITID NVDIRDIASE ELMKNISFVF QDIFLFKQSI SENILMGNKT AGMDEVIKAA KAAQCHDFIM ELPMKYDTVI GTKSIHLSGG ERQRIALARA VLKDAPVIIL DEATAFSDPE NEMKIQNALG ELIKNKTALI IAHRLSTIQN ADNIIVMDKG KITEEGKHGE LMEKEGKYYK MWENYTKALS WHLVEEGDQ
|
| |