Gene Sterm_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3268 
Symbol 
ID8598721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3429922 
End bp3431721 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content36% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003310040 
Protein GI269121863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.856994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATG AAAAAGCAAC AGGAATGAAA AGACTGTGGG AACTGGCAAC TGTTGAAAAA 
GGACTGGTGT ATATATCCTG TGTTTTATCG GTATTATCTA CGCTTGCTTC CTTTATACCT
TTTGCTGCAG TTTATTTCAT CATAAAAGAG CTGTTTGATG CATCAGGAAA TGTAGCTGGA
ATAGACGGTA TTAAGATGAT TAATTACGGC TGGCTTGCAT TTATCGGAGT TTTTATGACA
GTATTCCTGA ATTTTGCAGG ATTATGCTGT TCACATATAG CTGCATTTAA AACCTTGTAT
AAATTAAGGC TTCAGTTTAT AACACATCTT GCGAAGCTGC CCTTGGGATT TCATTCAACG
AATTCTGTGG GAAGAATGAG GAAGATAATA GATGAAAATA TTGAGAAACT GGAAGTATTC
ATAGCACACC AGCTGCCGGA TATGGCAGGT TCATTTTCGG CACCTGTAAT TCTGCTTATA
TTCTTGTTTC TCTTTGATTT TCGGCTGGGA CTGGCGTCGC TGATCCCGGT AGTACTTGCT
TATTACGTAC AGACAAGATC ATTCGGGAAA ACGAAAGCAA ATAAATTTAT GAAGCTTTAT
CAGGATGCCC TTGAGGAAAT GAACAGTGCT TCAGTGGAAT ATATAAGAGG AATTTATATA
ATAAAGGCTT TTAACCAGAC TGTATTTTCG TTCAAAAAAT TTCGTGAAAC AATAAAAATC
TATACGAAAT TTTGTCTGGA ATACACTAAT AATTTCAGGC AGATAATGAC GTTATTTTTT
GTATTGATTA ATAATGTATA TCTTTTTCTG ATACCTGCCG GACTGCTTAT TTTTTCAAAA
ACCAATGAGA AGAGAAGCTT TGCCATGACA TTTATATTTT ATCTGATATT GTCAGGATCA
TTTTCTTCAC TGTTTATGAA ATTAATGTAT GTATCGTCAA TGAGCTCGGA AATAGTCGAC
GGTATTGAAA GAATGGACAA AATAACAGAT ATAAGACCGC TCCCGGAAGC TGCAAGTCCG
AAATCAATAA ACGGATATGA CATTGCTTTT GAAAATGTAA GTTTTTCATA TAATGATTCC
AAAGAAAATG AAGCATTAAG CTCTGTTTCT TTCAAAGCGA AGCAGGGGGA GATAACAGCA
CTTGTAGGTG CCTCAGGAAG CGGGAAAAGT ACAATAGGGC ATTTGACAGC AAGATTCTTT
GACGTGTCGG AAGGAAGGAT TACTATAGAT AATGTGGATA TTCGTGATAT TGCTTCGGAA
GAGCTGATGA AGAATATAAG CTTTGTATTT CAGGATATAT TTTTATTTAA ACAGAGTATT
TCCGAAAATA TTCTTATGGG AAATAAAACA GCCGGTATGG ATGAGGTCAT AAAAGCTGCC
AAAGCAGCAC AATGTCATGA TTTCATTATG GAGCTGCCGA TGAAATACGA TACTGTTATA
GGAACCAAAA GCATTCATCT TTCAGGGGGA GAACGTCAGA GGATAGCACT GGCAAGGGCT
GTTTTGAAAG ATGCACCTGT AATTATTCTG GATGAAGCTA CTGCTTTTTC AGATCCGGAA
AATGAGATGA AGATACAAAA TGCTCTCGGA GAACTGATAA AAAATAAAAC AGCCTTGATT
ATTGCACACA GGCTTTCCAC GATACAGAAT GCCGATAATA TAATAGTTAT GGATAAAGGA
AAAATAACGG AAGAGGGTAA ACACGGGGAA CTAATGGAAA AAGAAGGGAA ATATTATAAG
ATGTGGGAAA ATTATACAAA GGCTCTGTCA TGGCATCTTG TGGAAGAGGG TGATCAATAA
 
Protein sequence
MENEKATGMK RLWELATVEK GLVYISCVLS VLSTLASFIP FAAVYFIIKE LFDASGNVAG 
IDGIKMINYG WLAFIGVFMT VFLNFAGLCC SHIAAFKTLY KLRLQFITHL AKLPLGFHST
NSVGRMRKII DENIEKLEVF IAHQLPDMAG SFSAPVILLI FLFLFDFRLG LASLIPVVLA
YYVQTRSFGK TKANKFMKLY QDALEEMNSA SVEYIRGIYI IKAFNQTVFS FKKFRETIKI
YTKFCLEYTN NFRQIMTLFF VLINNVYLFL IPAGLLIFSK TNEKRSFAMT FIFYLILSGS
FSSLFMKLMY VSSMSSEIVD GIERMDKITD IRPLPEAASP KSINGYDIAF ENVSFSYNDS
KENEALSSVS FKAKQGEITA LVGASGSGKS TIGHLTARFF DVSEGRITID NVDIRDIASE
ELMKNISFVF QDIFLFKQSI SENILMGNKT AGMDEVIKAA KAAQCHDFIM ELPMKYDTVI
GTKSIHLSGG ERQRIALARA VLKDAPVIIL DEATAFSDPE NEMKIQNALG ELIKNKTALI
IAHRLSTIQN ADNIIVMDKG KITEEGKHGE LMEKEGKYYK MWENYTKALS WHLVEEGDQ