| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3253 |
|---|
| Symbol | |
|---|
| ID | 8598706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3414814 |
|---|
| End bp | 3415641 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | phosphotransferase system PTS sorbose-specific IIC subunit |
|---|
| Protein accession | YP_003310025 |
|---|
| Protein GI | 269121848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATAA ATCTTATTCA GGCATTATTA ATAAGTATAT TTGCATATCT GGGAACACTG
CCGAGTCTGC TGGGGTCAAC AGTAGGCTGG TATGTTCTGG GAAGACCGTT TGTTTCGGGA
GCTATAATAG GTTTGATCCT GGGGGATGTT CAGGCAGGGA TTATAATAGG CGCGGCAGTA
CAGATAGTTT TTATAGCAAT GATTACACCG GGGGGAGCAA TGCCGACTGA CCTGAATGTG
GCGGCATATA TAGGAGTAGG TTTAGGGCTT ATTTCATATA AGTCGGGTGC CAGCGTGGAG
TCAGCCGTGG CAATAGCTAC GGCAGTAGGA GCTGTAGGAG TAGTATTTCA TAATTTTCAG
ATGATAGTAA ATACTTTATG GAATCAAAGA TCTGTAAAGT ATATAGAAAC GGCTGATTAT
AAGCAATTAT TACTTAATCA TTCTGTTTAT CCGCAGATTA CGCTGTTTCT TTTCAGAGCA
TTACCGACTT TTGTAATATT ATATTACGGA CAGAGATATG CTTCAGAAAT CTTAAGGGTA
TTTCCGGCAG ATTCTTATAT TATGAGAACT CTTACTACTT TAGGAGGAAT GCTTCCGGCA
ATAGGAGTTG CCATACTGAT AAATGCGATT ACCAAAAAAA ATATAGATAT ACTTCCTGTA
TTATTAGGGT TTACATTAGT AGTAACATTG GGAATAAATA TGCTTTCACT GGCAATAATA
GCAGCATTTT TTGCATACAG TCAGTTTCAT AATGATAAAG GACAGACGCT TCAGACAGAA
GAAGTAGGAG TGAAAGCAGA ACTGGATGAT ATGGAGGAGG AGCTGTAA
|
|---|
| Protein sequence | MYINLIQALL ISIFAYLGTL PSLLGSTVGW YVLGRPFVSG AIIGLILGDV QAGIIIGAAV
QIVFIAMITP GGAMPTDLNV AAYIGVGLGL ISYKSGASVE SAVAIATAVG AVGVVFHNFQ
MIVNTLWNQR SVKYIETADY KQLLLNHSVY PQITLFLFRA LPTFVILYYG QRYASEILRV
FPADSYIMRT LTTLGGMLPA IGVAILINAI TKKNIDILPV LLGFTLVVTL GINMLSLAII
AAFFAYSQFH NDKGQTLQTE EVGVKAELDD MEEEL
|
|---|
| |