| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3249 |
|---|
| Symbol | |
|---|
| ID | 8598702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3410493 |
|---|
| End bp | 3411935 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | alpha amylase catalytic region |
|---|
| Protein accession | YP_003310021 |
|---|
| Protein GI | 269121844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAACG GTGTAATGTT TCAATATTTT GAATGGAATT TACCTGCTGA TAAGAAACAC
TGGAAACGTT TAGCTGATGA TGCAGAACAT TTAAGAGAAA TAGGAATAAA TGCTGTATGG
ATCCCCCCTG CGATAAAAGG AACCTCTGAC TTAGATGTAG GATACGGGGC CTATGATTTG
TATGACTTGG GAGAATTTGA CCAAAAAGGT ACTATCCCTA CAAAATATGG TACTAAAGAA
GAGTTAAAAG CTGCAATTGA AGAACTGCAT AAATATGAAA TATCAGTTTA TTTGGATGCT
GTTATGAATC ATAAAGCCGG TGCAGATGAA ACAGAAAAAT TTTTAGCTCA GGAAGTTGAC
CCCAATGACA GAAACAAGCC AGTATCAGAT CCGTATGAAA TTGAAGGATG GACTAAATTT
AACTTTGAAG GCAGAAATAA TAAATACTCG GATTTCAAAT GGCATTGGTA TCATTTTAAC
GGAACAGATT TTAACAACCT CAATCAAAAA AATGCTATTT ACAGAATAAT GGGAGAGGGA
AAAAGCTGGG ATGAGAATGT AGATGATGAA AACGGCAATT ATGACTATCT TATGTTTGCC
AATATAGATT ATGATCATCC GGAAGTCGTA GACGAAATGA ACAAATGGGG AATCTGGGTA
GCTGATGAAC TTAATTTAGA CGGATTCCGC CTTGATGCAA TAAAGCATAT AAACAGTAAC
TTTATTGAAG GATTTCTTAA GGAAGTAAGA AAAGTCAAAG GGGACAAATT TTATGCAGTT
GGAGAATACT GGAAAGATGA TTTGGATTCT ATTCAAGAGT ATCTTAATAA TGTAGATTAT
GAGGTAGAAT TATTCGATGT TCCGCTGCAT TATAATTTTT TCACTGCTTC AAAAGAGGGA
GAGGCATACG ATTTAAGAAA TATATTTGAA AATTCTATTG TAACAAATAA TAAGCTTTTT
TCTGTTACTT TTGTAGATAA TCATGACTCA CAATGGGGAA GTGCGCTTGA ATCACAGGTG
GAAAGCTGGT TCAAGCCTCT GGCATATGCT ATTATACTTC TTATAGCTGA TGGGTATCCG
TGTATTTTTT ATGGTGATTA TTACAGTCTG GGTGATAAAG AAAGTCCTCA CAGATGGATG
ATCGATAAAC TTTTATACAC AAGAAAACAT TATGCTTACG GTGAACAGAT AAATTATTTT
GACGATCCTA ATCTTATAGG AATAGTAAGA AAAGGTGCTG AGGAACATCC TGATTCAGGC
CTTGTTATGA TTTTATCAAA TCATACTGAG GGAAGTAAAA AAATAAATAT AGGTAAAGAG
CACGCAGGTG AAACTTGGTT CGAAATAACT GAAAATATTA AGGATGAAAT ACAGATTGAT
GAAAACGGCG AAGCCGAATT CAGAGTAAAT GCCGGAAATG TAGCAGTATG GGTTAAAAAA
TAA
|
|---|
| Protein sequence | MENGVMFQYF EWNLPADKKH WKRLADDAEH LREIGINAVW IPPAIKGTSD LDVGYGAYDL
YDLGEFDQKG TIPTKYGTKE ELKAAIEELH KYEISVYLDA VMNHKAGADE TEKFLAQEVD
PNDRNKPVSD PYEIEGWTKF NFEGRNNKYS DFKWHWYHFN GTDFNNLNQK NAIYRIMGEG
KSWDENVDDE NGNYDYLMFA NIDYDHPEVV DEMNKWGIWV ADELNLDGFR LDAIKHINSN
FIEGFLKEVR KVKGDKFYAV GEYWKDDLDS IQEYLNNVDY EVELFDVPLH YNFFTASKEG
EAYDLRNIFE NSIVTNNKLF SVTFVDNHDS QWGSALESQV ESWFKPLAYA IILLIADGYP
CIFYGDYYSL GDKESPHRWM IDKLLYTRKH YAYGEQINYF DDPNLIGIVR KGAEEHPDSG
LVMILSNHTE GSKKINIGKE HAGETWFEIT ENIKDEIQID ENGEAEFRVN AGNVAVWVKK
|
|---|
| |