Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3200 |
Symbol | |
ID | 8598653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3352142 |
End bp | 3353467 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | PTS system, lactose/cellobiose family IIC subunit |
Protein accession | YP_003309972 |
Protein GI | 269121795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0308848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG ATAAAAAAAG AATATCTGAT TATTTCGGAA TGGTAGCTGT AAAACTGGGC GGACAGATTC ACCTGAGATC TCTCAGGGAC GGCTTTGCAT CTATTATGCC TTTTATGATT CTGGCAGGGT TTGTAATATT TATTAATTAT GTTATTTTAG AACCGTCAGG ATTTATGGGG AAAATAATAG ATCCAAAAAT TCTTACAAGG CTTCAGGAAA TAGGAAGCTC GGTTTCAAAC GGAACACTCG GCATAATAAC AGTCATTGTT ACTGCGTCTG TTTCATATCA TCTAAGCCAG AACAGAAATT TTGATAATGT ACTTGCATCA GTATTAGTAA GCTTGTCTAC ACTTTTTGTC GTAACTCCTT TTATGAGTAC GTTTAAACCT GAAGGGCTGA ATGAAAGCTT TGTTGTAAAT GGTGTTATTC CTGTGAATTA TACAAATGCT ACTGGTATGT TCGTAGGAAT TATAGTCGGT CTTTTTGCTA CTGATATATT TATAAAGCTT TCGGCAAATA AAAAGCTTCA GATAAATATA GCGGGAGATA TTCCGCCGGC AGTAATCAAA TCATTTAATG TACTGATCCC TATTATGATA AATGTAATTA TCTTTGCAAT AATATCGTTT TTATTGAATC TTCTGTTTAA ATTAGATTTT AATCAGCTGA TTTCCATGCT TATAACAAAG CCTCTAAGCC ATGTGACAAC AAGTCTTTTC GGATTTTTAT TTTTAATGTG TCTGGGAAAT CTGTTTTTTG GATTCGGGAT TCATCAGGCT GTTATATCCA ATCCTCTGCT GGATCCGTTT CTGCTCCAGA ATATGCAGGA AAATATGCTG GCATATGCGA ATCATCAGCC CATACCTCAT ATAATTACTT CCGCATTTAA AGATGTTTTT GGTATAACAG GAGGTTCGGG CAATACAATA GCTCTTCTTA TAGCGATTTT TATTTTTGGA AGAAGAAAAG ATTATAAAGA TGTTGCTAAA ATGTCATTTA TGCCAGGTTT ATTCAATATA AACGAACCGG TGATTTTTGG ACTGCCTATA GTTTTTAATC CGTTCCTTAT TGTTCCGTTT GTAATAGCAC CGGTATTTTC TCTGCTTACT GCTTATTTTG CCACTTCAGT GGGACTTATA AATCATGTAG TGGTACAGAT TCCATGGACA ACGCCTCCGG TTATTTCAGC GTTTCTTGCT ACAGGAGGAG ACTGGCGTGC AGCGGTGCTG CAGTTAGTGA TTATTATAAT TACTATATTT ATATATCTTC CTTTCCTGAA AATGGACGAA CGCATGTCAA AAATCAATAA GGATGATATT TCCTGA
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Protein sequence | MKKDKKRISD YFGMVAVKLG GQIHLRSLRD GFASIMPFMI LAGFVIFINY VILEPSGFMG KIIDPKILTR LQEIGSSVSN GTLGIITVIV TASVSYHLSQ NRNFDNVLAS VLVSLSTLFV VTPFMSTFKP EGLNESFVVN GVIPVNYTNA TGMFVGIIVG LFATDIFIKL SANKKLQINI AGDIPPAVIK SFNVLIPIMI NVIIFAIISF LLNLLFKLDF NQLISMLITK PLSHVTTSLF GFLFLMCLGN LFFGFGIHQA VISNPLLDPF LLQNMQENML AYANHQPIPH IITSAFKDVF GITGGSGNTI ALLIAIFIFG RRKDYKDVAK MSFMPGLFNI NEPVIFGLPI VFNPFLIVPF VIAPVFSLLT AYFATSVGLI NHVVVQIPWT TPPVISAFLA TGGDWRAAVL QLVIIIITIF IYLPFLKMDE RMSKINKDDI S
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