Gene Sterm_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3170 
Symbol 
ID8598623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp3319445 
End bp3320095 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content36% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003309942 
Protein GI269121765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG TAAAAAAGCC TGATGAGCGC AGAAATGAGA TACTGGATGC TGCTGAAAAA 
CTTTTCGCCG AAAAAGGCTT CATGAAAACT ACAATAATAG ATATTTTGCA GGAAGTCGGG 
ATAGCTAAAG GGACATTTTA CTATTACTTT AAGTCAAAAG AGGAAGTAAT GGATGCTGTG 
GCTATGAGGT ATATAGATAT GGGGACAATA GCAGTGAAAA AAATTATAGA AGATAAAAGC 
TTTACTGCTA TAGAGAAGCT CACAATACTT TTGACCAAAG ATGTTACTAA CGCAGAAAAT 
AAAGATGAGA TGCTGAAAGA ATTTCATCAG GCAGGAGACG CGGAAATGCA TCTGAGAAGT 
CTGGTTATAT CTATAGAGCG TCTGACACCG TTAATAACCG ATGTAGTACT TCAGGGGATA 
GAGGAGGGCG TATTTAATAC TCCGTATCCA AAAGAGACTG TGGAAAATAT ACTGGTTATT 
CTGAATATGA TTTTTGATGA AGGAGTATTT CAATGGACAG CGGAGGAGAA AATTCAAAAA 
GCTAAAGGTT TGGCTTATCT CATGGAAAAG TCCCTTGGAG CTGAAAAAGG AAGTTTTGAT 
TTTATGACAG AGAGTCCTGT CGTAAAAGAT AGTATTAATA ATAAAGAATA A
 
Protein sequence
MRIVKKPDER RNEILDAAEK LFAEKGFMKT TIIDILQEVG IAKGTFYYYF KSKEEVMDAV 
AMRYIDMGTI AVKKIIEDKS FTAIEKLTIL LTKDVTNAEN KDEMLKEFHQ AGDAEMHLRS 
LVISIERLTP LITDVVLQGI EEGVFNTPYP KETVENILVI LNMIFDEGVF QWTAEEKIQK 
AKGLAYLMEK SLGAEKGSFD FMTESPVVKD SINNKE