Gene Sterm_3165 details

Gene Information

• Locus tag: Sterm_3165
• ID: 8598618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 3314336
• End bp: 3315094
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 36%
• Product: formate/nitrite transporter
• Protein accession: YP_003309937
• Protein GI: 269121760

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000339601
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAGCG AAACTTTGGA AAAACTAGAT GAATACGGAA TAAAAAAAGT AAAACTTTTA 
AAACAGAGTA AAACAAAATA CTTTATTGCT TCTATGCTTG CAGGATTTTA TGTGGGACTG 
GGAATATTTC TTATTATGAC AATAGGAGGA GTTACAAGCC AGAACGGATA TCAGTACAAA 
ATATTTATGG GTCTCGGCTT TGGAATAGCA CTAAGTCTTG TTATTATGGC CGGTTCAGAA 
TTATTTACCG GTAATAATAT GGCTATGTTT TCCGGTATGC TGAATAAAAA AATTACCGTA 
AAAGACGGAA TTAGTATATG GATATTTAGT TATCTAGGAA ATCTTGCCGG CTCTATGCTT 
GTCGGACTGC TATTTTTTCT CTCAAATGCT GCAAATAAAG AGGTAGCTGG ATTTTTACTG 
AATACTGCAA AGTCAAAGAT GAATACGCCT GCACCGGATT TATTTTTTAA AGGTATTTTA 
TGTAATATCC TTGTATGTCT TGCGGTTCTC TCTGCAGTTA AGCTAAAAGA GGAAACAGCA 
AAACTTATTA TGATATTCTG GTGCCTTTTT GCATTTATAA CTACCGGATT TGAACACAGC 
GTTGCCAATA TGAGTCTCTT TTCGGCAGCA TTGCTGTATC CGCATCCGCT GGAAATATCA 
TTAATCGGTT TCGGGTATAA TTTATTCTGG GTGACTCTGG GTAATATTGT CGGAGGCTGT 
GCTTTGGGCG GCGCCTATTA TATAATCGGC AAAAAATAA 

 

Protein sequence

MFSETLEKLD EYGIKKVKLL KQSKTKYFIA SMLAGFYVGL GIFLIMTIGG VTSQNGYQYK 
IFMGLGFGIA LSLVIMAGSE LFTGNNMAMF SGMLNKKITV KDGISIWIFS YLGNLAGSML 
VGLLFFLSNA ANKEVAGFLL NTAKSKMNTP APDLFFKGIL CNILVCLAVL SAVKLKEETA 
KLIMIFWCLF AFITTGFEHS VANMSLFSAA LLYPHPLEIS LIGFGYNLFW VTLGNIVGGC 
ALGGAYYIIG KK