| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3125 |
|---|
| Symbol | |
|---|
| ID | 8598579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3275690 |
|---|
| End bp | 3276661 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003309898 |
|---|
| Protein GI | 269121721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000947593 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT ACTGTCAGCA ATATCTGAAA TCTCTTAAAC ATATGGTGGA TGAAGTGGAT
ATAGGTTTGA CGGAAAGGGA ATATCATGTA TTAAATGGTG ATGAGAAAAT AAATATCATT
CACCAGATAA TGTGTGAAGG TGTGGAGTTA CTTAAGGTAG AAGCCAGGTT GAAGAATTAT
TGTGAATATA ATAATAAAGA TTTTGAAGAC TGTTTAATAA TCCGTTTTTT AAAAGAAGGG
GTAATGACGG TAAAATATCC TGATGAAGAG AGCTACAGTC TGAAAGCGGG AGAGCTGTTT
CTGAGTTACG GCGGAAAAGG CTCGACAGAA GTACTTATAC CTAAACCGGA TACAAAAATA
AAACTGCTTA TATTAGTATT AAGTAAGGGG TATCTTGAAA ATTTTCGCGA AGACAAAGAA
GTAGAGAAAT GTGTTCGTTA TTTAAAAGAA AATCTGGTTC CCAACGAAAA AAAATTCATA
AGAAATACTC AGGAAAAACT TCTTAATATT CTTGATCTGG TAATGAGATA TGAAGCGAAG
TGGGGAAAGA AATTTTTTGC CTTTTCCAAG GTAAACGAGG GTATGGGCGG TATAATAACA
GTTTTTATGA AGACTCTTAT TGAAATAGAC AGTCATGACA GCGATGTATT TGAAGATGTT
GTGGATTATA TGGAAAATAA TTATAATGAG TCTGATCTAC TGGCAAAAAT ACACAAAAAG
TTTTATATGA ACAGAGGAGA ATTGAGTAAA AAATTTAAAG AAAAGACCGG AATGGGAATG
CATGAATTTC TTAAAAATAT TAAGCTTGAC AGAGCCTACA GTATGCTTAG AGATGACGGA
CTGAAGGTAT CGGAAGTAGC AAATCTGGTC GGCTATGAAA ATTATGGTTA TTTTTCACAA
ATTTTTAAAA AACACTACGG GGTATATCCG TTGGAGGTGA AAAGTAAAAG AAATATTAAA
AATAAAAAAT GA
|
|---|
| Protein sequence | MKNYCQQYLK SLKHMVDEVD IGLTEREYHV LNGDEKINII HQIMCEGVEL LKVEARLKNY
CEYNNKDFED CLIIRFLKEG VMTVKYPDEE SYSLKAGELF LSYGGKGSTE VLIPKPDTKI
KLLILVLSKG YLENFREDKE VEKCVRYLKE NLVPNEKKFI RNTQEKLLNI LDLVMRYEAK
WGKKFFAFSK VNEGMGGIIT VFMKTLIEID SHDSDVFEDV VDYMENNYNE SDLLAKIHKK
FYMNRGELSK KFKEKTGMGM HEFLKNIKLD RAYSMLRDDG LKVSEVANLV GYENYGYFSQ
IFKKHYGVYP LEVKSKRNIK NKK
|
|---|
| |