| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3113 |
|---|
| Symbol | |
|---|
| ID | 8598567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3261103 |
|---|
| End bp | 3262104 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003309886 |
|---|
| Protein GI | 269121709 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0280203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TTCTGGTGAC AGGAGCCACA GGATTTCTTG GTTCTTATAT TCTGAAAGAA
TTAAAGGGGA AGTATGATAT AATTTCTGTG GGAAGAAATA AAGAAAAGCT TATGGAAATA
AAAAAAGACG ATAGTAAAAT AGAGTGTATA AGTGCAGATT TGGCAGAATT GAAGGAAGTT
CTGGATTTTC CCGAAGCTGA TATTGTCGTA CATTCTGCTG CGTTGTCTAC AATATGGGGT
TCAAAAAAAG AATTTATAAA AAATAATGTA ACAGCAACAG AAAATATTAT AAAATACTGC
AGGACAAAAA AAGCCCGGAG GCTGGTGTAT GTTTCTACTC CCAGTGTTTA TACCGGAAAA
AAAGACAGGC TTAATGTAAG GGAAAATGAA TTTGACAGTG GCAATAAGCT GAATTACTAC
ATAGAAACAA AGATTGCAGC GGAAAAAAAA GTACTGGAAG CAGAGAGCGA CGGTTTGGAT
GTAGTTATAA TAAGACCAAA GGGCCTGATA GGAATCGGTG ATACAAGTAT ACTGCCAAGA
ATTATCGAAG CAAATAATAA AATAGGAATT CCTGTTTTCA AAGGGAAGGA AGATATTCTT
GCAGATATGA CAAGCGTGGA AAATACTGCA TATGCAATAT TATTGTGTAT GGAGAAAGAA
GGGGTTTCCG GAGAAATATT TAATATAACA AACGGAGAGC CGACAAACCA GAAAAAACTT
CTGAAATACG TATCGGAAAG TCTCGGGACA GAATTTCGAT ATAAAAAGCT TTCATTTGGA
AGAATTTACA TGATTGCTTC AATACTGGAA GGTATATATA AATTTTTCAG GGTAAGCAAG
GAGCCGCTGC TGACAAGATA TACAGTGTGT ACTTTGGCAT TCAGTCAGAC ACTTAACATT
GAAAAGGCTG AAAAGCTTCT GGGATATAAA CCGAGAATAA GTCTTAGAGA TGAAATAAAA
AGATTCGGAA AATTTTACAA AGAAAAAGAT CATATAAAAT AG
|
|---|
| Protein sequence | MKKVLVTGAT GFLGSYILKE LKGKYDIISV GRNKEKLMEI KKDDSKIECI SADLAELKEV
LDFPEADIVV HSAALSTIWG SKKEFIKNNV TATENIIKYC RTKKARRLVY VSTPSVYTGK
KDRLNVRENE FDSGNKLNYY IETKIAAEKK VLEAESDGLD VVIIRPKGLI GIGDTSILPR
IIEANNKIGI PVFKGKEDIL ADMTSVENTA YAILLCMEKE GVSGEIFNIT NGEPTNQKKL
LKYVSESLGT EFRYKKLSFG RIYMIASILE GIYKFFRVSK EPLLTRYTVC TLAFSQTLNI
EKAEKLLGYK PRISLRDEIK RFGKFYKEKD HIK
|
|---|
| |