Gene Sterm_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3088 
Symbol 
ID8598542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3233586 
End bp3234587 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content35% 
IMG OID 
Productmetalloendopeptidase, glycoprotease family 
Protein accessionYP_003309861 
Protein GI269121684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TGGCAATTGA GACATCGTGT GACGAAACTT CGGTTGCAAT AATAGAAGAC 
GGAAAAAAAG TACTGAGCAA TATAGTTTCC AGCCAGATTA AGATACATGA AAAATACGGC
GGAGTGGTTC CGGAGATAGC ATCAAGACAT CATATAGAAA ATATTCTGCC TGTTTTTGAA
GAGGCGCTGG ATGAAGCAAA ATTATCTATA GACGACATAG ATTATATAGC AGTAACATAT
ACTCCGGGAC TGATAGGAGC ATTGCTTGTA GGAGTGGCTT TTGCCAAAGC GGTTAGTTAT
TCTGCGGGAA TTCCTCTGAT ACCGGTACAT CACCTTAAAG GTCATGTATA TTCCAGCTTT
ATTGAATATG ACATAAAGCT TCCGGCAATA TCACTGGTTG TTTCAGGCGG ACATACCATT
CTTTTGAAAA TTAATGAAGA TTATGAATTT ACGTTAATGG GGGAAACACT TGATGATGCA
GCCGGAGAAG TGTATGATAA AATAGCAAGA CTTTTAGGGC TGGGTTATCC GGGAGGACCT
AAAATTGACA GTTTATCTGA AAAAGGTGTA CATGATTTAA AGATAAAAAA GCCAAATGTG
AAGGAAAATG AATTTAGCTT CAGCGGAGTA AAAACATTTG TAACCAATTA CATTAATAAT
GAAAAAATGA AGGGCAATAT TATTAACAAG GAAAATATAG CAAGATCTTT TCAAGATACA
GTCATTACAA TTTTAAGTGA AAAAGCAGTA AATCTGTGTA AAAAAGAAGG AATAAAAACA
TTGACAGTTG TTGGCGGTGT GTCTGCAAAT AAAGCTCTGA GAAGAAAAAT GACAGAAATG
GGAGAAGAAA ATAATATTGA AGTTTTTTTT CCGGGCTTGG AATACTGTAC TGACAACGCT
GCCATGATAG GGGTAGCTGC ATATTATGAA TTAAAGAAGA AAGGAAGAGA TTATAATTAT
ATTTTATTAG ATGCTGTTGC TTCTAAAGAT ATGTTTTTAT AA
 
Protein sequence
MKILAIETSC DETSVAIIED GKKVLSNIVS SQIKIHEKYG GVVPEIASRH HIENILPVFE 
EALDEAKLSI DDIDYIAVTY TPGLIGALLV GVAFAKAVSY SAGIPLIPVH HLKGHVYSSF
IEYDIKLPAI SLVVSGGHTI LLKINEDYEF TLMGETLDDA AGEVYDKIAR LLGLGYPGGP
KIDSLSEKGV HDLKIKKPNV KENEFSFSGV KTFVTNYINN EKMKGNIINK ENIARSFQDT
VITILSEKAV NLCKKEGIKT LTVVGGVSAN KALRRKMTEM GEENNIEVFF PGLEYCTDNA
AMIGVAAYYE LKKKGRDYNY ILLDAVASKD MFL