Gene Sterm_3054 details

Gene Information

• Locus tag: Sterm_3054
• ID: 8598508
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3197262
• End bp: 3197855
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 38%
• Product: Ribonuclease H
• Protein accession: YP_003309827
• Protein GI: 269121650

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAT TAAGACTATT TGATAATGAG TATAACTGTA TTATTGCAGG TGTAGACGAA 
GCCGGCAGAG GACCTCTTGC AGGGCCTGTG GTTGCAGCGG CAGTGATAAT AGAGGATTAT 
TTTGAGGAAC TTGAAGAAAT AAATGATTCC AAAAAATTAA CAGAGAAAAA AAGAGAAAAA 
CTTTATGCTG TAATAAGAGA AAAACGTAAG GTAGGAATAG GGACGGCCGA TGAAAAAGAA 
ATAGATAAAA TAAATATACT TAATGCTACT TTTCTGGCAA TGAGGAGAGC TTTGGAGCAG 
ATAGATAATT ATGATATAGT ACTAGTAGAC GGGAACCATA AAATAAGGGA GTATTCAGGG 
CGTCAGGAGG AAATAATCAA AGGTGACGGA AGATCACTGT CTATTGCAGC GGCATCAATA 
GTGGCAAAGG TATACAGAGA TAACATAATG AAGGATTTCG CCCGGCAGTA TCCTGATTAT 
AGATTTGAAA AACATAAAGG ATATGGGACG AAGCTTCATC GCGAACTGCT TCATGCACAT 
GGGGCATGCA AGATACACAG AAAGACTTTT TTAAGGAAAA TACTGGGGGA ATAG 

 

Protein sequence

MSELRLFDNE YNCIIAGVDE AGRGPLAGPV VAAAVIIEDY FEELEEINDS KKLTEKKREK 
LYAVIREKRK VGIGTADEKE IDKINILNAT FLAMRRALEQ IDNYDIVLVD GNHKIREYSG 
RQEEIIKGDG RSLSIAAASI VAKVYRDNIM KDFARQYPDY RFEKHKGYGT KLHRELLHAH 
GACKIHRKTF LRKILGE