Gene Sterm_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3049 
Symbol 
ID8598503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3191940 
End bp3192950 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content34% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003309822 
Protein GI269121645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.490257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA AAGGAAAACT CTCTATTAAA GATATTGCCA AAAGAGCAGG TGTTTCTATT 
GCTACTGTAT CGCGTGTCCT GAATAAAAAC GGAAGATATT CCAGAGAAAC TGAGGAAAAA
ATTCTGAAAA TTATAGAGGA GAGCGGCTAC AGAAGGAATG TAAATGCAAA AAGTCTGAGA
ACTAAAAAAA CTCAGACAAT AGGGGTAATA GTTCCGGATA TTACTAATGA ATTTTTTGCA
AAAATAATAC AATCTGTAGA AAGAAATGCT ATGAAATATG ACTACTCAGT GTTCGTGTGC
AATACAGACG AGGATGAAGC AAGAGAACAG ATGCAGGTGA AAAATCTGCT GGAAAAATTT
GTGGATGGAA TCATTTATAT TTCAGGTAAA ACAAAATCAG GGGAAGAGGT AGAGGAAAAT
ATAGGAATCC CTGTGGTGTA CATAGATCGT TATATTTCAG CATCGAAGAT GTATGTTCAG
TCGGATAATA AAGAAGGAGG ATATCTGGCA ACAAAAGAAC TGCTCAGCGC AGGCTGTGAA
AATATAATGA TAATAAAGGA TTTCAGACAG ATATCGTCTA TTATAAGCCG TTATGAAGGG
TATAAAATGG CTCTTAAAGA AGCAGGGAAA TCTGTTGACG AGAATTTAAT CCATAATGTA
GATCATGTTA ATTATGAAGA AGCTAAAAAA GGAGTTTTAG AAAAAATAAA CAACGGGATA
AAATTTGACG GTATTTTTGC TACAAATGAC TGGATGGCCA TAGGAGCAAT AAGTGCACTG
AGAGAAAGAG AAATTAAAAT TCCTGAAGAA GTAAAAATAG TTGGTTTTGA CAATATGTCA
ATAAGTGAAA TCACATCACC TTCTATTACT ACTATACATC AGGATTCGGA AAAATTAGGC
GAGTATGCTA CAGAAATACT AATGGGAATA ATTTTAAAAG ATGAAACAGA TGTAAAGAAT
ATCAGTGTTC CCGTAAAATT GGTGAAACGT AATAGTACTA AAAATAAATA A
 
Protein sequence
MSVKGKLSIK DIAKRAGVSI ATVSRVLNKN GRYSRETEEK ILKIIEESGY RRNVNAKSLR 
TKKTQTIGVI VPDITNEFFA KIIQSVERNA MKYDYSVFVC NTDEDEAREQ MQVKNLLEKF
VDGIIYISGK TKSGEEVEEN IGIPVVYIDR YISASKMYVQ SDNKEGGYLA TKELLSAGCE
NIMIIKDFRQ ISSIISRYEG YKMALKEAGK SVDENLIHNV DHVNYEEAKK GVLEKINNGI
KFDGIFATND WMAIGAISAL REREIKIPEE VKIVGFDNMS ISEITSPSIT TIHQDSEKLG
EYATEILMGI ILKDETDVKN ISVPVKLVKR NSTKNK