Gene Sterm_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3048 
Symbol 
ID8598502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3190189 
End bp3191730 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content35% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003309821 
Protein GI269121644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA TTGAAAAACT GGTTGAAATG AAAAATATTA CAAAAAAGTT TTCAGGTGTT 
ACAGCTTTGG ATAATATTTC CTTTGATGTA AGAAAAGGCG AGGTTCATGT ACTTTTAGGG
GAAAACGGAG CCGGAAAATC AACACTTATG AAAATTTTGA GCGGAGCATA TCAGCCGACA
TCAGGAAGTA TCAATTTAAA AGGAAAGGAT TATAACCAGC TGACACCAAA GGATTCATAT
GAAAACGGAA TAAGCATTAT CTATCAGGAA TTAAGTGTAA TCAATGAATT ATCGGTGCAG
GAAAATCTGT TTGTAGGAAA ACTTCCTACA AGAAAGGTTT TAGGTGTAAA TCTTGTAGAT
TATAAGAAAA TGAAGGAAGT AGCAGAAGTA CTGACAAAGA AAGTGGGACT TCACAGAGAT
TTGAATATAT TTGTGGAAGA ATTAAGCATT TGTGAAAAGC AGCAGCTGGA AATTGCAAAA
TCACTTGTAT CAGATGCAGA TATAATTATT ATGGATGAGC CTACTACTTC ATTAACACAG
GAAGAAACAG ACCAGCTGTT TGCAATAATA AGACAGCTGA AATCAGAGGG TAAAGGAATA
GTTTATATAT CTCATAAACT AAAAGAGCTT AAGGAAATAG GAGACAGGGT TACTGTATTG
AAAGACGGAA CTTATGTGGG AACAAGAGAG GTAAAAGATG TAGAGGTAAA GGATCTGGTT
TCCATGATGG TAGGTAGAGA AATAAAATCA AAATATCCGT CGAATAATCC TGAACTGGAC
AGAACAAAAA CTATTTTTGA GGCTAAAAAT ATAACGAGAT ATGACGGGAA AGCAAAAAAT
GTTTCTTTCA AGCTTCAGCA AGGAGAAATT CTTGGATTTG CCGGACTGAT AGGCTCTGGA
AGAAGTGAAC TGATGAATGC AGTGTTTGGT GCTGATCCTA TAAAGGAAGG AAGTATTTCT
CTTTTTGGAA AAGAATTAAA ACCAAAAAGC GAGTATATTT CAATAAAAAA CGGAATAGCA
TTTGTCACTG AAAACAGACG TGAAACTGGA TTTTTTCATA ACTTTGACAT AAAAGAGAAT
ATATCTATTC TTCCTTTTAT AAAAAACTCA AAGCTCGGGG GAACCTGGGG ACTGATAAAC
AGCAAGATGG AAAAGAAGTA TGCCGATGAT GAAAAAAAGA AATTAAATAT AAAGTGTTCT
TCAATTAATC AGAATATTAC CGAACTGTCA GGGGGAAATC AGCAGAAAGT AATACTCGGT
AAATGGATGG CAGCAGAATC ATCACTTATT ATATTTGATG AACCTACCAA AGGAATAGAT
GTAGGAAGTA AAAGTGAAAT ATATACACTA ATGAGAAAAC TATCCGATGA GGGTAAAGGA
GTACTGATGG TATCTTCGGA GCTTCCGGAA TTACTTGCGG TATGTGACAA AATAGCTGTT
TTCAAAAACG GGGAAATAGC AGAAATTCTA AGTGCAGATG AGGCTACTGA AGAAAAAATT
ATGTATATTT TAACACACGA AGGAGATATG AAAAATGACT AA
 
Protein sequence
MENIEKLVEM KNITKKFSGV TALDNISFDV RKGEVHVLLG ENGAGKSTLM KILSGAYQPT 
SGSINLKGKD YNQLTPKDSY ENGISIIYQE LSVINELSVQ ENLFVGKLPT RKVLGVNLVD
YKKMKEVAEV LTKKVGLHRD LNIFVEELSI CEKQQLEIAK SLVSDADIII MDEPTTSLTQ
EETDQLFAII RQLKSEGKGI VYISHKLKEL KEIGDRVTVL KDGTYVGTRE VKDVEVKDLV
SMMVGREIKS KYPSNNPELD RTKTIFEAKN ITRYDGKAKN VSFKLQQGEI LGFAGLIGSG
RSELMNAVFG ADPIKEGSIS LFGKELKPKS EYISIKNGIA FVTENRRETG FFHNFDIKEN
ISILPFIKNS KLGGTWGLIN SKMEKKYADD EKKKLNIKCS SINQNITELS GGNQQKVILG
KWMAAESSLI IFDEPTKGID VGSKSEIYTL MRKLSDEGKG VLMVSSELPE LLAVCDKIAV
FKNGEIAEIL SADEATEEKI MYILTHEGDM KND